Protein

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Genbank accession
QXV74259.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,95
Protein sequence
MALFAQLNVTASLPNIEYWGIAISPDAKWIACGPSGGGTQVQLLRRNPNTGHYDQIKTINGFSIGTQAIYDMAFGPNSDQLYIPLPGSGIYRALLTSPGGVDQWDLDTSTGNNPLKSHGGQIRGIGISPNGLYCGYVDSGGIINVFNVNTKATLVNNSTGAIGEDCKFSADGRWFGAVVRGGGGLSVWSTTSWTFVNPTGISASNICWAAEFSKDGNAVVGAAINGGTGSGEATYNGSAWSGGTLQSAVAMASATYLDDDLAITLPFASSAVLMYRGSSFTTETHNIPNMGVHVARGNIPNGNTKGKVLAIARVSGSGSGIVAYELVDPFTQRSVPGSVTGEYYGIAVSPDGKWIGLGPSPTNGAVKILQKNGGDADYGTVQTPSGLPTNTAGVSDMVFNASSDTLYIGMEQRVHVLKLISGTWTYDRVLPATPGSAINGIDVDAEERLLVIGTGGGLLSVIKLADDSVVFSVNNGATIQDAKFSPNGRYLGVAYQANGLVVYDRGSPLTDTFTAMTVTGGGASVANWALQFNENNDRIISGSIFSGNASSGFTLSGGAWSGQTLQSAHNIVGATYMLGTRAITISNAGAVPDIYDDPSFTAKTVPSIASVGAHAARAGRGSGYGKCVLAIARTTASGGSVVVYTLPASITTTSNGAIAYQKFAAAAQGNINSRGTGDWSYSKLTMSGQANIPIGSETALSYPAFKVNVAGGAFEPEYPDAQPWYWKGVVGVENQKIAYSTQVPTTPWLYSDIVFSRFAMDNLVHVNVEATSDLVFPKFEVTAVSGKIEGDSAIQYPKFGIAANIFDYDEVRADIVYPFAEVHATVKLDYYIDSGYSFPKFSAAGLVEFVLANGAYTFPKFEMEVDAASQRTTADILYAGFEIAADLNAPIGIASGYSYPKMAIAGEMHVPLGIHATPTYAKYELDVVGGATNGTHADYLLPKYNVHAQIGYTQSVDSVIVYQKFKIAAAVLPPADFEADIVFPKFGTSFVVDNYYGVALDAAIDMVFEGDAENTKRRKTINVFEH
Physico‐chemical
properties
protein length:1026 AA
molecular weight: 107689,23150 Da
isoelectric point:5,03272
aromaticity:0,10331
hydropathy:0,02885

Domains

Domains [InterPro]
SSF82171
STR
15–498
SSF82171 DC_1393
IPR015943
STR
15–228
IPR015943 IPR015943
IPR001680
RBD
108–147
IPR001680 IPR001680 IPR001680
QXV74259.1
1 1026
Architecture
STR
STR
STR 15-559 | STR 627-1026
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV74259.1
1 1026
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,9176
Central domain 12 442 432 0,8790
C-terminal 443 1026 583 0,0499
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-442
C-terminal
443-1026

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph12
[NCBI] 		2836128 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74259.1 [NCBI]
Genbank nucleotide accession
MW980064 [NCBI]
CDS location
range 190520 -> 193600
strand +
CDS
ATGGCACTTTTTGCTCAGCTTAACGTTACGGCATCGCTCCCCAATATCGAATATTGGGGCATCGCCATCTCGCCGGATGCTAAGTGGATAGCGTGCGGTCCCTCTGGCGGCGGCACGCAAGTTCAACTGCTGCGCCGTAATCCGAATACCGGTCACTACGATCAGATCAAAACGATCAACGGTTTTAGCATCGGCACGCAAGCCATCTACGACATGGCTTTCGGCCCCAATTCGGACCAGTTGTATATCCCGCTACCCGGTTCCGGCATCTATCGTGCTCTTCTTACCTCTCCCGGCGGTGTCGATCAATGGGATTTGGATACTTCGACTGGTAATAACCCGCTTAAGTCTCATGGCGGGCAGATTCGCGGTATCGGTATCAGCCCTAACGGTCTGTATTGCGGCTACGTTGATAGCGGCGGCATTATCAACGTCTTCAACGTCAACACCAAGGCCACGCTGGTAAATAACAGCACTGGTGCCATCGGTGAAGATTGCAAATTCTCGGCGGATGGTAGGTGGTTCGGCGCTGTAGTTCGTGGTGGCGGTGGCCTCTCTGTTTGGAGTACCACGTCGTGGACCTTCGTCAACCCTACTGGTATTAGCGCAAGCAACATCTGCTGGGCTGCTGAATTTAGCAAAGACGGCAATGCTGTTGTCGGTGCCGCGATCAACGGCGGCACTGGTTCTGGTGAAGCAACGTATAACGGCTCGGCATGGTCTGGCGGAACGTTGCAAAGCGCTGTCGCCATGGCGAGCGCGACTTACCTTGATGATGACCTTGCGATCACGTTGCCGTTTGCGTCGTCTGCGGTGCTCATGTATCGCGGTTCGTCTTTTACCACAGAGACGCACAACATCCCCAACATGGGCGTTCACGTTGCGCGCGGTAACATCCCTAACGGCAACACAAAGGGCAAAGTTCTCGCGATTGCTCGCGTTTCAGGTTCAGGCAGCGGCATTGTTGCTTACGAACTGGTAGACCCGTTCACGCAGCGCTCAGTTCCGGGTTCGGTAACGGGTGAATACTATGGTATCGCGGTTTCTCCGGATGGTAAGTGGATCGGTCTTGGACCGTCTCCTACCAACGGTGCCGTCAAAATCCTGCAAAAGAATGGCGGTGACGCTGATTACGGCACTGTTCAAACACCTAGCGGCCTGCCTACCAACACGGCGGGCGTTTCTGATATGGTGTTCAACGCCAGCAGCGACACGCTTTACATCGGCATGGAGCAACGCGTTCACGTTCTCAAGCTGATCAGCGGCACGTGGACTTATGACCGCGTGTTACCAGCCACGCCGGGAAGCGCGATTAACGGCATTGACGTTGATGCAGAAGAGCGATTGCTGGTAATAGGCACAGGTGGTGGCCTGCTCAGCGTCATCAAACTGGCCGACGACTCTGTTGTTTTCAGTGTCAATAACGGCGCGACGATCCAAGACGCAAAGTTCTCGCCAAACGGCAGATACCTTGGCGTGGCTTACCAAGCGAACGGACTCGTCGTCTATGATCGCGGCAGTCCTCTTACCGACACCTTCACGGCAATGACGGTAACGGGCGGCGGCGCGTCTGTAGCTAACTGGGCGTTGCAGTTCAACGAAAACAATGATCGCATCATCTCCGGTTCGATCTTCTCCGGTAATGCGTCGAGCGGTTTCACGCTCAGCGGCGGCGCTTGGTCGGGCCAAACGTTGCAATCGGCGCACAACATTGTCGGCGCTACCTACATGCTCGGCACGCGAGCTATTACCATCTCGAATGCTGGCGCGGTGCCGGATATCTACGACGATCCTAGTTTTACCGCGAAGACCGTCCCTTCGATTGCGTCGGTAGGCGCTCACGCGGCGCGAGCCGGTCGCGGTTCTGGTTATGGTAAGTGCGTTCTGGCAATCGCCCGAACGACGGCATCTGGCGGCAGTGTCGTTGTCTATACGTTGCCTGCCTCTATTACTACAACGTCAAACGGTGCGATAGCCTATCAGAAATTCGCAGCGGCGGCGCAAGGCAATATCAACTCGCGTGGAACCGGAGATTGGAGCTATAGCAAGCTCACCATGTCCGGACAGGCGAATATCCCTATCGGTTCGGAAACCGCCTTGTCTTACCCCGCGTTCAAAGTGAATGTTGCGGGCGGGGCATTCGAGCCGGAATATCCAGACGCGCAGCCGTGGTATTGGAAAGGCGTCGTCGGAGTAGAAAACCAGAAGATCGCGTATTCTACCCAAGTGCCAACGACGCCATGGTTGTATAGCGATATCGTGTTTTCACGCTTTGCAATGGACAACCTTGTCCATGTAAACGTCGAAGCAACAAGCGATCTCGTCTTCCCGAAGTTCGAAGTGACGGCGGTAAGTGGTAAGATCGAAGGCGATAGTGCAATCCAGTATCCGAAGTTCGGTATCGCTGCTAACATTTTCGACTATGATGAAGTTCGCGCCGATATCGTCTATCCGTTTGCCGAAGTCCACGCTACGGTAAAACTGGACTACTACATAGACAGCGGCTACAGCTTTCCGAAGTTCTCGGCTGCTGGTTTGGTAGAATTCGTCCTCGCGAATGGTGCTTATACCTTCCCGAAGTTTGAAATGGAGGTTGATGCGGCGTCGCAAAGAACGACCGCTGACATACTCTATGCAGGCTTCGAGATTGCTGCCGATCTCAACGCGCCGATTGGTATCGCCTCTGGTTATAGCTATCCCAAGATGGCAATCGCCGGGGAAATGCATGTGCCGCTCGGCATCCATGCAACTCCTACCTACGCTAAATATGAGCTAGATGTAGTTGGTGGTGCTACCAACGGGACGCACGCGGACTATCTTCTACCGAAGTACAATGTCCATGCGCAGATCGGTTACACGCAGTCGGTCGACTCGGTTATCGTCTACCAGAAATTCAAGATCGCAGCGGCGGTGTTGCCGCCTGCCGATTTTGAAGCAGATATCGTCTTCCCGAAGTTTGGCACAAGCTTCGTGGTAGATAACTATTACGGCGTTGCATTGGACGCCGCAATCGATATGGTTTTCGAAGGCGATGCAGAGAATACGAAACGTCGCAAGACGATCAACGTATTCGAACACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f995516073821d37dfcbd11e9846c0652f2bd993c9f527366361a776437970dd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5437
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank