Protein

View in Explore
Genbank accession
XCO40805.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAYSWQESVKPAGTKDIQCDIEYLDKSYIHVYLDGVETAAFTWTSDTNIRLDSALSADSKVLLVRKTEREYLYIQFASGAPFIEGNVDTQNTQFLHLAQELVEGRAIEGFYGDISMNGYRITHVGAPVDGGDVATKSYVDSADATLDSKISVEVAARIQGDIKALEDAKDYTDVSLAGVILPEGLSDVGLWVPSAVALMASTTDLTPIKVRGFYRPDDGGEGTWVATGNTVTAKAGTHDITAAKIYSASGVEYQLQVGVGMGIISPKANGAKEVADYAEAQADTDDFVCLGQAVNGIISVLPLWMQPGNNINDQSTYAVITFNISSGLWRIGKEAAKLRSNVIYNLGASTIYVKASASRKFQVTGEYLNGFEHSVEDVEEVYTALGNKLYWESVSLGFTQMAGGKIIGDHVPGTLDADCTAGIGILALNPWYCSFEDIRVENFRVNLVGMQVRIDEDGVMSSDIIPYKSSVLPEKIGNFYGCTFKNMYISTARYCCVRLHIDWCQWIGGTISNNGRWTSSVSGQQCDYYLIETGHGFHCSGAYLSIPAYNPTERKPNKSVIATAARGSVYTACYMEGTPSYVTILNKWWNDGNEKGFGLNIDCIGSQYRPDRTYKYLTFEPGAFGYYDANENWVPPAGYGSYPSTNGIDFVRFGSPTHDIGAFPHGGFDFKYGTYGVMYNTNTTYPNPPDVDSMRGHKTTKEMFSPYGLMAANGILQLPVLSPAMHSNICIWYKDLTGSFDLSNIAIWTNANIDQNSADAGYNQNLFFARAEMAIDYGNGYKMAIIQNLKWNNNDGVGTAGSQQSLQFTIPDTTPIILKAVQAFTGGIPVFPVGLDYRPETSDLCVWGHVNPRNGFKYNLFKKVGGGIFMPEDVIYPWTAHQRANTDYKFATTVYEDYGYTNLPLIIKGGNSIGAFFAKEFTVTVVEVDSTNGRTTVDVPAAYKPYVFMGVPLNITGGSSTGYTGETRIHKRNLKTDGTLSGQYVLDAVVGTIGDTLNINQRTLTARTYRRDYTADALTANGSFTLRGTTMRFGYNAGTTNTRAIEFYVGGGTTKSADINAYGTSIGLNASAIVFGGNIGFSATNTWDIGSSGNTVKNIYTQNAVTVVSDRTHKPVREGIPDNILDIWGTIGIKRFKYDWAIAEKGEDAARWHVGYIAQDIIEAFEAAGEDATKWALVVRNEWPAEDAVIESWGDEYETIPAQCDEQGKKVSEETQVLVRQAGSRVVKEAIPAGGEWRLVMDECNAMEAAYQRRRMAQLEAALASR
Physico‐chemical
properties
protein length:1266 AA
molecular weight: 138477,47370 Da
isoelectric point:5,01589
aromaticity:0,11216
hydropathy:-0,22054

Domains

Domains [InterPro]
DC_1609
STR
1–403
DC_1609 IPR036388
IPR005604
ATT
11–103
IPR005604 IPR030392
IPR030392
CHP
1109–1266
IPR030392
cd10144
CHP
1109–1255
cd10144
XCO40805.1
1 1266
Architecture
STR
ATT
STR
RBD
STR 1-10 | ATT 11-103 | STR 104-403 | RBD 1096-1266
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO40805.1
1 1266
Domain Start End Length (AA) Confidence
N-terminal 1 273 273 0,9926
Central domain 274 750 478 0,9886
C-terminal 751 1266 515 0,5467
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-273
Central
274-750
C-terminal
751-1266

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146045
[NCBI] 		3232224 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO40805.1 [NCBI]
Genbank nucleotide accession
PP889494.1 [NCBI]
CDS location
range 40436 -> 44236
strand +
CDS
ATGGCATACAGCTGGCAAGAGTCAGTAAAACCTGCTGGTACTAAAGATATCCAGTGTGATATCGAGTACCTGGATAAGTCTTACATTCACGTTTACTTAGACGGTGTTGAGACTGCCGCCTTCACGTGGACCAGTGATACCAACATCCGACTAGACTCAGCCCTCAGTGCAGACTCTAAAGTGTTGCTCGTTCGTAAGACTGAGCGGGAGTACCTTTACATCCAGTTTGCTAGCGGGGCCCCGTTTATTGAGGGTAACGTGGATACCCAGAACACCCAGTTCCTGCACCTGGCACAGGAACTTGTAGAGGGTCGCGCTATTGAGGGATTCTACGGCGACATCAGTATGAATGGGTACCGCATCACTCACGTGGGCGCCCCTGTGGATGGTGGTGACGTAGCTACTAAGAGTTATGTGGATTCTGCTGATGCAACCCTCGACTCCAAAATCTCTGTAGAGGTTGCAGCCAGAATCCAGGGCGATATAAAAGCCTTAGAAGACGCTAAAGACTACACTGACGTGTCTCTTGCTGGGGTAATTCTCCCCGAGGGTTTATCGGACGTAGGACTTTGGGTGCCATCCGCAGTGGCGCTGATGGCCTCTACCACTGATTTGACCCCGATAAAGGTGCGGGGTTTCTATCGTCCCGACGATGGGGGTGAGGGTACGTGGGTAGCAACCGGAAACACTGTAACTGCAAAGGCCGGGACTCACGACATAACCGCAGCGAAAATCTACAGCGCCAGCGGTGTTGAGTACCAGCTGCAGGTAGGTGTCGGTATGGGTATTATCAGCCCCAAAGCCAACGGTGCCAAGGAGGTCGCAGACTATGCTGAGGCACAAGCTGATACTGATGATTTTGTATGCTTAGGGCAGGCAGTTAACGGCATCATCAGCGTACTACCTCTGTGGATGCAGCCTGGTAATAACATCAATGACCAGAGCACTTACGCTGTAATCACGTTCAATATTTCATCTGGGTTGTGGCGTATCGGGAAAGAAGCTGCTAAGCTCCGTTCCAACGTTATCTACAATCTCGGTGCGTCCACTATTTATGTTAAGGCCAGCGCCTCTCGTAAGTTCCAGGTTACTGGTGAGTACCTTAACGGATTTGAACACTCTGTAGAAGACGTGGAAGAGGTGTACACGGCGCTAGGAAACAAGCTCTACTGGGAATCGGTAAGTTTGGGCTTCACCCAGATGGCCGGCGGAAAGATAATTGGCGACCATGTACCCGGTACGCTGGATGCTGATTGTACTGCTGGTATCGGTATACTGGCACTTAATCCATGGTACTGTTCTTTTGAAGACATCCGCGTAGAGAATTTCCGTGTCAATCTCGTCGGTATGCAGGTTCGCATTGATGAGGATGGTGTGATGTCCAGCGATATCATCCCATACAAATCCAGTGTCCTCCCTGAGAAAATTGGCAACTTCTACGGGTGTACATTCAAAAATATGTATATCAGTACAGCGCGTTACTGCTGTGTGCGTCTGCACATCGACTGGTGCCAGTGGATTGGCGGGACGATTTCGAACAACGGACGCTGGACGAGCTCAGTCAGCGGCCAGCAGTGCGATTATTACCTGATTGAAACTGGGCACGGATTCCATTGCTCTGGTGCATATCTCAGCATCCCGGCGTACAACCCTACCGAGCGTAAACCGAACAAGTCTGTTATTGCTACCGCTGCCCGTGGCTCCGTCTACACTGCGTGCTACATGGAAGGCACTCCTTCCTACGTCACCATCCTAAACAAGTGGTGGAACGACGGTAACGAGAAGGGCTTTGGCTTAAACATCGACTGTATCGGCTCGCAGTACCGTCCTGACCGAACCTATAAGTACCTGACTTTCGAGCCAGGCGCATTTGGGTATTATGATGCTAATGAGAACTGGGTGCCGCCAGCCGGATACGGTTCGTACCCATCAACCAACGGCATTGACTTCGTTCGCTTCGGTAGTCCGACACATGATATTGGTGCATTCCCACACGGTGGATTTGACTTCAAATACGGCACCTATGGTGTGATGTACAATACAAACACCACTTATCCAAATCCGCCAGATGTGGATAGTATGCGCGGGCACAAAACCACCAAGGAGATGTTCTCTCCGTATGGGCTGATGGCGGCGAATGGTATTCTGCAACTGCCTGTGTTGTCGCCAGCAATGCACAGCAATATCTGTATCTGGTACAAAGACCTGACCGGAAGTTTTGACCTGTCCAACATCGCCATCTGGACTAATGCCAACATTGACCAGAATTCCGCAGATGCCGGGTACAACCAGAACCTGTTCTTTGCACGCGCGGAAATGGCCATCGATTATGGTAATGGCTATAAAATGGCGATTATCCAGAACCTCAAGTGGAACAACAATGATGGCGTTGGTACAGCGGGTAGCCAGCAGTCGTTGCAGTTTACTATCCCCGACACTACTCCGATTATTCTCAAGGCTGTCCAGGCATTCACTGGGGGTATTCCGGTATTCCCTGTAGGGCTGGATTATCGCCCAGAGACGTCAGACTTGTGTGTGTGGGGTCACGTCAATCCGCGTAACGGGTTTAAATACAACTTGTTCAAAAAGGTTGGCGGCGGTATCTTCATGCCGGAGGATGTAATCTATCCGTGGACAGCACATCAACGTGCTAACACAGATTACAAGTTCGCCACTACTGTTTACGAGGATTACGGCTACACCAACCTGCCGTTAATCATCAAAGGCGGTAATAGCATCGGTGCCTTCTTCGCTAAGGAGTTTACCGTAACTGTCGTTGAGGTTGACTCCACTAATGGCCGGACAACCGTAGACGTACCAGCCGCGTATAAGCCATACGTTTTCATGGGTGTGCCTCTGAATATTACCGGAGGTTCGTCCACTGGATACACTGGCGAAACTCGTATCCATAAGCGTAACCTGAAAACTGATGGAACTCTTAGTGGGCAATACGTCCTAGATGCCGTTGTTGGCACCATTGGTGATACTCTGAATATCAACCAGCGAACGCTTACAGCGCGAACTTATCGTCGTGACTATACCGCAGATGCTTTGACGGCAAATGGTAGTTTTACCCTTCGTGGAACTACAATGCGCTTCGGGTATAACGCAGGGACGACAAATACACGTGCCATTGAATTTTATGTTGGGGGTGGCACCACTAAGTCCGCTGATATAAACGCATACGGGACCTCCATTGGTCTTAACGCCTCGGCTATTGTCTTTGGTGGTAACATTGGATTCAGCGCTACAAATACCTGGGATATCGGCTCGTCTGGTAACACCGTTAAGAACATCTATACCCAGAACGCAGTAACTGTCGTCTCAGACCGCACCCATAAGCCTGTACGGGAAGGGATACCTGATAACATCCTGGATATTTGGGGAACAATCGGTATCAAGCGGTTTAAGTACGACTGGGCTATTGCGGAGAAGGGTGAAGATGCTGCTCGATGGCACGTGGGGTACATCGCCCAGGATATTATCGAAGCATTTGAAGCGGCTGGCGAAGATGCTACCAAATGGGCGTTGGTTGTGCGTAACGAGTGGCCTGCCGAGGATGCGGTTATCGAGTCGTGGGGTGATGAGTACGAAACCATCCCGGCGCAGTGCGACGAGCAAGGTAAGAAGGTGTCTGAGGAAACTCAGGTACTAGTGCGACAAGCAGGCTCTCGCGTCGTAAAAGAGGCTATCCCAGCAGGGGGTGAGTGGCGCCTTGTTATGGATGAGTGCAATGCTATGGAGGCCGCCTATCAACGTAGGCGCATGGCGCAGCTAGAGGCCGCATTGGCCTCTCGCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
aa0845e051c400dd7657dd7daf0578dfa579f9cd3e86264769558d58b80d1140
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5651
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank