Protein

View in Explore
Genbank accession
XYW65999.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MANQFMAHFGPSYVESTHFGENNAVKYKLELQGSNADSSVKTSFVRVNGNNLLSNTPRGITAITIDANGVGSNSATFDIYGRPEHFDTLRTYLMSAPSNRIVALVSWDAIKSTEAFDTFMRQYGAVAWPGSEYLNKANTNSSFYSRSSYVAIFNTNLRRFCYENFVGNNPARNEDTTAYVEAVFDIVDDIGACGVPERKVDEMSEHFSSASDYAFYRFFPTENISEWESVYHVKCELYRDQVLIDNGGQTRLYIWSQDAAGKWYNQLILGDTALPAGVWTPYEGYYKLPAQSLGATMWGSQVYKWPSSVKLGLAGCRNVTITRVTRDDDDKVIDAAIGVNGIRANSIKDSSDLGNPVMQLLNLKPKNALTSNEFRERK
Physico‐chemical
properties
protein length:378 AA
molecular weight: 42248,55750 Da
isoelectric point:5,51062
aromaticity:0,12169
hydropathy:-0,39101

Domains

Domains [InterPro]
DC_0912
STR
1–378
DC_0912
PS52031
LEC
23–199
PS52031
XYW65999.1
1 378
Architecture
STR
STR 1-378
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYW65999.1
1 378
Domain Start End Length (AA) Confidence
N-terminal 1 169 169 0,0054
Central domain 170 367 199 0,3710
C-terminal 368 378 10 0,9436
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-169
Central
170-367
C-terminal
368-378

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS4
[NCBI] 		3448186 No lineage information
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYW65999.1 [NCBI]
Genbank nucleotide accession
PV831792 [NCBI]
CDS location
range 114673 -> 115809
strand +
CDS
ATGGCGAATCAATTTATGGCCCATTTTGGGCCATCTTATGTTGAATCGACACATTTTGGCGAAAATAATGCCGTAAAATATAAACTTGAACTGCAGGGGTCCAACGCGGACTCCTCAGTCAAAACATCTTTTGTGCGCGTTAATGGGAACAATTTGCTGTCGAACACACCCCGCGGCATAACGGCTATTACAATAGACGCTAATGGCGTAGGTAGCAATTCAGCAACGTTTGATATATACGGCCGGCCTGAACATTTTGATACGTTGCGCACATATTTGATGTCGGCTCCTTCGAATCGGATTGTCGCACTTGTTTCTTGGGATGCTATCAAATCGACTGAAGCTTTCGATACGTTTATGCGCCAATATGGAGCAGTTGCGTGGCCAGGTAGTGAATATCTGAATAAAGCAAATACCAATAGTTCATTTTATAGCCGAAGCTCGTACGTCGCTATTTTCAATACAAATCTGCGTAGATTTTGCTATGAAAATTTTGTTGGCAATAATCCTGCTAGAAATGAAGATACGACAGCATATGTCGAAGCTGTTTTTGATATTGTTGACGATATTGGTGCATGCGGTGTCCCGGAGCGAAAAGTGGATGAAATGTCTGAACATTTTTCGTCTGCTAGTGATTATGCGTTTTATCGTTTTTTCCCGACTGAAAACATCTCGGAATGGGAATCGGTTTATCATGTCAAATGTGAGCTTTACCGCGACCAAGTTCTCATTGATAACGGCGGGCAGACAAGACTATACATTTGGTCTCAGGACGCTGCCGGAAAATGGTACAACCAATTGATCCTTGGTGATACAGCATTGCCGGCTGGGGTTTGGACTCCGTATGAAGGTTATTACAAACTGCCAGCTCAAAGTCTTGGGGCAACAATGTGGGGCTCTCAGGTTTACAAATGGCCATCATCAGTTAAATTGGGCTTGGCCGGTTGCAGAAACGTTACAATCACACGAGTAACTCGTGATGATGACGATAAAGTCATAGACGCTGCTATTGGTGTCAATGGTATTCGAGCTAATTCTATTAAGGATAGTTCCGATTTAGGTAATCCGGTTATGCAATTGCTTAATCTGAAACCGAAAAACGCTTTGACTTCAAATGAGTTTAGAGAACGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dbfdfb8327112f4f19f116438b823f3ca51e0f656e82c7674bd527b5b5afedb3
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7742
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50