Protein

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Genbank accession
AKA61146.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MAGNLIYITDAGRAALVAPGNTGTTAHQVAQIGLATAAFVFKPDMTALPNELKRITTFGGDTVAKDTIHIVIQDDSADQYKLYGFGLYLDNGVLFGVYVQNDPILEKAAASMLLLAADTVFASIDVTKLDFGPTSFLNPPATTERKGVVELATQVEVDDGTDDSRAVTPKTAAARYAPLVRPQLTGPVTITSTSTDQDGQLSVAAASGALSRGAKIRFHGTFAAGTTDTNARLIASIRAGYDGGTWGREYLDFWINRTPNDANSDANQIRAMRITYGGRIVVGNREDDGKTALQVGGDGAFTGGISSSGLDAGGANIRLRNGRDVLLRNDGSNFYLLLTNNSDPGASWNGYRPFTINMATGVLSLDDTGAGTYFGGALNVVGQLNLINGTNEARARFGASGGYFFGNAAEAGFYLPSNGAMFAFNFTRKNLLVNGKDVWHAGNLPNPAQTTGITMSGQFLASEGTVSQPGISFVNDGAPDTGFFHVADGAFAVTNNGRETMRFLAGDPNRVLVGTTVDDGHMFQVGGNAITRGLHRFGTGSTTAWANCSGDWGYFRSNGNVSVGSEGATGVLQLIAGNSEIAKLVPGGRMTIGGTADDGVNVAQVAGSMRAANYFIAGQGTGDSGLIGIYKGANGPNIGFYGSATIGAGAITFSAGGTERARVTDNGKFVVGKTGDDGSGAIIQANGGVKGVSGVGALVASNGAGTGQTSIIMRREGGAADQKQWELMQGGDGTFAIRTVNDAYSASQNALWITRGSGSSVGNMALMQNGGRVLIGGAVDDGSILNAAGLVRGLGFAVDGGASWATIYFKNGAKTRFAIGKSDTDDFAMTAWADDGATQSKVLDIARGTQIVSFAKRPTWAGGAVPYDTGNFDPNSKVNKAGDTMTGDLRVKQPNNTDARGFVLARADSTAQAWIHATAKGNYSAWATMNPDGSWKSNPITVYNADNRVEFNSDIHVTALSRFYNRPTLNRDGWQADFGLRNNLPGYDSWTYLRARAGGGMEIINNAYDAVTWAVDDWGTMYMRGQETLRTDGNLRLGWRGRWLGEEIDDIWKNIGGKANAGAQCQKGERSFYFGILNQQIHLPDPWCIDGLEDPLNARFGETRIYGCWYRNQ
Physico‐chemical
properties
protein length:1113 AA
molecular weight: 117190,75000 Da
isoelectric point:5,66073
aromaticity:0,09254
hydropathy:-0,22345

Domains

Domains [InterPro]
DC_1549
ATT
1–293
DC_1549 IPR048390 DC_1952
AKA61146.1
1 1113
Architecture
ATT
ATT
STR
ATT 1-293 | ATT 299-356 | STR 800-1079 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKA61146.1
1 1113
Domain Start End Length (AA) Confidence
N-terminal 1 610 610 0,2882
Central domain 611 809 200 0,4148
C-terminal 810 1113 303 0,8853
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-610
Central
611-809
C-terminal
810-1113

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage AP3
[NCBI] 		1636201 Uroviricota > Caudoviricetes > Peduoviridae > Aptresvirus AP3 >
Host Burkholderia cenocepacia
[NCBI] 		95486 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKA61146.1 [NCBI]
Genbank nucleotide accession
KP966108 [NCBI]
CDS location
range 14017 -> 17358
strand +
CDS
ATGGCTGGAAACCTCATCTACATCACGGACGCCGGCCGCGCCGCACTGGTGGCGCCGGGCAACACCGGGACCACCGCGCACCAGGTCGCGCAGATTGGCCTTGCCACGGCGGCCTTCGTGTTCAAGCCGGACATGACCGCACTGCCGAACGAGCTGAAGCGCATCACGACGTTCGGCGGCGACACAGTCGCGAAGGACACGATCCACATCGTGATCCAGGACGACAGCGCGGACCAGTACAAGCTGTACGGGTTCGGCCTGTACCTGGACAACGGCGTGTTGTTCGGCGTCTACGTGCAGAACGATCCGATCCTCGAAAAGGCGGCGGCCTCGATGCTGCTGCTGGCCGCCGATACCGTGTTCGCCTCGATCGACGTGACGAAACTGGATTTCGGGCCGACGTCGTTCCTCAATCCGCCGGCGACCACCGAGCGCAAGGGCGTCGTCGAGCTGGCGACACAGGTCGAGGTCGACGACGGCACGGACGACTCGCGGGCTGTGACGCCGAAGACTGCAGCCGCACGATATGCGCCGCTCGTGCGGCCGCAGCTCACCGGCCCCGTCACGATCACGTCGACGTCGACCGACCAGGACGGGCAGCTCTCCGTCGCCGCGGCGTCCGGCGCGTTGAGTCGCGGTGCGAAGATCCGCTTCCATGGAACGTTCGCTGCTGGTACGACGGACACCAATGCCCGCCTCATCGCATCGATCCGCGCCGGCTACGACGGCGGCACGTGGGGCCGGGAATACCTCGATTTCTGGATCAACCGCACGCCGAACGATGCGAACAGCGACGCGAACCAGATTCGCGCGATGCGGATCACTTACGGCGGCAGGATCGTCGTCGGCAATCGCGAGGACGACGGAAAAACCGCGCTTCAGGTTGGAGGCGACGGCGCGTTCACGGGCGGCATTTCGTCGTCCGGGCTCGACGCGGGCGGCGCCAACATCCGACTGCGCAACGGCCGCGACGTGCTGCTGCGCAACGACGGCTCGAATTTCTATCTGCTGCTGACCAACAACAGCGATCCGGGCGCATCGTGGAACGGCTACCGTCCGTTCACCATCAATATGGCTACGGGTGTCTTGTCACTCGATGACACGGGTGCCGGGACGTATTTCGGTGGTGCGTTGAACGTCGTGGGGCAGCTCAACTTGATCAACGGCACCAATGAAGCGCGAGCGCGATTCGGCGCCAGTGGTGGATATTTCTTCGGCAACGCTGCGGAGGCCGGGTTCTACCTGCCGTCCAACGGCGCGATGTTCGCATTTAACTTCACGCGGAAAAACTTGCTCGTCAATGGGAAAGACGTGTGGCACGCGGGCAACCTGCCGAACCCGGCGCAAACGACCGGCATCACTATGTCGGGGCAGTTCCTTGCATCCGAAGGCACCGTAAGCCAGCCCGGTATCTCGTTCGTGAACGACGGTGCACCGGACACGGGTTTTTTCCACGTTGCTGACGGGGCGTTTGCCGTTACGAACAACGGTCGGGAAACAATGCGGTTTCTCGCTGGCGATCCGAATCGCGTCCTCGTCGGCACGACCGTCGATGACGGACACATGTTTCAGGTTGGCGGGAACGCGATCACGCGCGGGCTGCATCGATTCGGCACTGGCTCGACGACCGCATGGGCTAACTGTAGTGGCGATTGGGGCTACTTCCGGTCGAACGGAAATGTGTCGGTCGGCAGTGAAGGCGCGACCGGTGTCTTGCAACTGATTGCCGGCAATTCCGAAATCGCGAAGCTCGTGCCGGGCGGTCGGATGACGATCGGCGGGACTGCCGACGATGGCGTGAACGTGGCGCAGGTAGCCGGCAGCATGCGCGCGGCGAACTATTTCATCGCCGGTCAGGGCACTGGCGACTCTGGCCTGATCGGGATTTACAAGGGAGCCAACGGGCCGAACATCGGCTTCTATGGCTCCGCCACCATCGGCGCAGGAGCGATTACGTTCAGCGCTGGCGGCACCGAGCGTGCTCGTGTAACCGACAACGGAAAATTCGTCGTCGGCAAGACTGGTGACGACGGTAGCGGCGCGATCATTCAAGCAAACGGCGGCGTAAAGGGTGTGAGCGGCGTCGGTGCGCTCGTCGCATCGAACGGAGCCGGCACCGGTCAGACGTCGATCATCATGCGGCGTGAAGGTGGCGCGGCCGATCAAAAGCAGTGGGAACTGATGCAGGGTGGCGATGGGACTTTCGCCATTCGTACGGTCAACGATGCGTATTCCGCGTCTCAGAATGCACTGTGGATCACACGCGGTAGCGGTTCGAGCGTCGGGAACATGGCACTTATGCAGAACGGCGGTCGCGTGTTGATCGGCGGTGCCGTTGACGACGGATCGATTCTCAACGCCGCAGGTCTTGTTCGTGGGCTCGGTTTCGCTGTTGATGGTGGCGCGTCGTGGGCGACGATCTACTTCAAGAATGGAGCGAAAACCCGTTTCGCGATCGGCAAGTCAGATACCGACGATTTCGCGATGACCGCATGGGCCGACGACGGCGCCACGCAGTCCAAGGTACTGGATATCGCTCGTGGCACGCAGATAGTTTCGTTCGCGAAACGCCCGACATGGGCGGGCGGTGCAGTTCCGTACGACACGGGCAATTTCGACCCAAACTCCAAGGTGAACAAGGCCGGCGACACGATGACCGGCGATTTGCGTGTCAAGCAACCGAACAACACGGACGCGCGCGGCTTTGTGCTCGCGCGTGCGGATAGCACTGCGCAGGCGTGGATTCACGCGACGGCCAAGGGCAACTATTCGGCATGGGCGACCATGAATCCGGACGGGTCGTGGAAATCGAACCCGATCACCGTCTACAACGCTGACAACCGGGTGGAGTTCAATTCCGATATTCATGTCACGGCTCTTTCGCGCTTCTACAACCGACCAACGTTGAACCGCGACGGTTGGCAGGCCGATTTTGGTCTGAGGAACAACCTGCCGGGTTACGACTCGTGGACGTACCTTCGTGCGCGCGCCGGCGGCGGCATGGAAATCATCAACAACGCGTACGACGCGGTCACGTGGGCCGTTGATGACTGGGGAACGATGTACATGCGGGGACAGGAAACTCTCCGCACAGACGGAAACTTGCGTCTCGGGTGGCGTGGCCGCTGGCTCGGCGAAGAAATCGACGACATCTGGAAAAACATCGGGGGCAAGGCCAACGCCGGTGCTCAATGTCAAAAAGGTGAGCGCTCGTTTTACTTCGGCATCTTGAACCAACAGATCCACCTCCCGGACCCGTGGTGTATCGACGGTTTGGAAGACCCGTTAAACGCCAGGTTCGGGGAGACCCGAATCTATGGCTGCTGGTATCGGAATCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
51806fe27b1bf8551e2b80969abf367bfa9a4ca2da278666adfa14f3879891f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6122
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The temperate Burkholderia phage AP3 of the Peduovirinae shows efficient antimicrobial activity against B. cenocepacia of the IIIA lineage Roszniowski,B., Latka,A., Maciejewska,B., Vandenheuvel,D., Olszak,T., Briers,Y., Holt,G.S., Valvano,M.A., Lavigne,R., Smith,D.L. and Drulis-Kawa,Z. 2017 27770178 GenBank