Protein

View in Explore

Genbank accession

XOB77688.1 [GenBank]

Protein name

regulator of chromosome condensation

RBP type

Evidence RBPdetect2

Probability 0,55

Protein sequence

MGQTNQTTVTLVGAGGSPPYNFAVVAGPNTTIPATLAGTALTVDATSLATGTYSVQLQITDQKGIVSTKIISVDVVDPTTFSILNRDVAIEPNILPFSATVPLSSTGGNGAVTWSLIPSVTTLPGADIVGSTLSFTLTSLGEWAIGVRATDLLGNTVTRVLSISVASATVVSIVDGHALIQVAALQGEVGTHQFTLTVADSTATVTHNTFNYTVDTPVSSVDIAETAVDHFWGAGDTTEVVYPIAGDLSGFAIGAGTPVTASNGLTATVDPTTNSLIVTGPPTKFGNAEIELPIAILQGTTQVATITRAFTLVSYNGTNNSGDMTCTTKPYIVGEVVGLNPQRPYFNSPSIFKNAGYKVQVALNSTLPLGLSLDSVTGLIYGSVLAADVAQSTLQYVDSTGTIQATITVVWDIVASQFQLIDNLVDGQLQAAYTGTLGSSSSAPLSGVTIHRGVLPTGMAFGISTDAKSVTLTGTPTQAGYYDVWISVTNANNQVAYLYKRLVFAYIAPLVVQTTFLQNILTGVAFSQTLHATGGTQPYTWAVTGGTLPNGVTLNANSGVLSGTPSDAAFNSDITFQVTDARGVSASAALALIINNTLTITTPVLPVITPGTNYIFQVQAAGGQGAYQWSLGSGSAALPGGITLSASGILSGATSLSSFSENIIVQVTDAANNVATATFLLAIGSNFGLIIDTEGIGPIVRGATYNGRLSVIGNGIAPYTWSIAADSPNILPPGFTLTGDATNQGATATLAGRTVAQLLNDSVKVQVVDSNGNSAVTFLPLDTFSGLSVATTSLPQATVTGNYSVQLLANGLNPPFTWSLDPTSPPLPNGLTISSGGIISGVPTATANLTIVVRVTDHLGDFATKGLQLIALASTLAITSTSVAQATAGVPYNFALTATGGAPGYTWSVSPNSASVLPSGLSIDPPSGTIFGTTLASGFSKNITFRVTDSIGVVREATFPVTVLAGIKLFAGPDVIAGSSLNSLGLVANGDVTAINPRPNLSFLIVATNVISTSPSGFSFGVPAGFSASCVSLGTINLSVGSQTITLPKSAVFALSGPFGAAGVGTHTFNFSVSDSGVNASVAFTWTVYPSNAITLVASNGALPTR

Physico‐chemical properties

protein length:	1106 AA
molecular weight:	112193,98670 Da
isoelectric point:	4,50093
aromaticity:	0,07143
hydropathy:	0,40615

Domains

Domains [InterPro]

IPR013783
STR
418–499

IPR013783 DC_2153 PF05345 DC_2153 IPR015919

IPR013783
STR
505–592

IPR013783 IPR013783 IPR013783 IPR013783

IPR015919
STR
508–596

IPR015919 PF05345 DC_2153

PF05345
RBD
509–592

PF05345 DC_2153 PF05345

XOB77688.1

1 1106

Architecture

STR

STR 418-499 | STR 502-687 | STR 777-967 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR013783	STR	IPR013783	418	499	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
DC_2153	STR	DC_2153	502	598	Novel HMM	DC_2153	Central	Low	Positional only	21 proteins / 21 hits
IPR013783	STR	IPR013783	505	592	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR015919	STR	IPR015919	508	596	Merged direct domain	Cadherin-like superfamily	Central	Low	Positional only	3 proteins / 3 hits
PF05345	RBD	DC_0124	509	592	InterPro cluster	Putative Ig domain	C-terminal	Low	Positional only	14 proteins / 14 hits
IPR013783	STR	IPR013783	593	684	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
DC_2153	STR	DC_2153	594	687	Novel HMM	DC_2153	Central	Low	Positional only	21 proteins / 21 hits
PF05345	RBD	DC_0124	599	683	InterPro cluster	Putative Ig domain	C-terminal	Low	Positional only	14 proteins / 14 hits
DC_2153	STR	DC_2153	777	872	Novel HMM	DC_2153	Central	Low	Positional only	21 proteins / 21 hits
IPR013783	STR	IPR013783	785	867	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
PF05345	RBD	DC_0124	790	860	InterPro cluster	Putative Ig domain	C-terminal	Low	Positional only	14 proteins / 14 hits
IPR013783	STR	IPR013783	868	963	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
DC_2153	STR	DC_2153	868	967	Novel HMM	DC_2153	Central	Low	Positional only	21 proteins / 21 hits
IPR015919	STR	IPR015919	878	964	Merged direct domain	Cadherin-like superfamily	Central	Low	Positional only	3 proteins / 3 hits
PF05345	RBD	DC_0124	878	963	InterPro cluster	Putative Ig domain	C-terminal	Low	Positional only	14 proteins / 14 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Tunturiibacter phage Tunturi_5 [NCBI]	3378199	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	No host information

Coding sequence (CDS)

Genbank protein accession

XOB77688.1 [NCBI]

Genbank nucleotide accession

PP885688 [NCBI]

CDS location

range 181296 -> 184616
strand -

CDS

ATGGGTCAGACGAATCAGACAACAGTAACTTTGGTGGGAGCGGGTGGCTCGCCGCCATATAACTTCGCAGTGGTCGCCGGACCCAACACCACAATTCCCGCGACGCTCGCAGGAACGGCCCTCACGGTCGATGCAACCTCACTCGCGACCGGCACTTATTCGGTCCAGCTGCAGATCACCGATCAAAAAGGTATCGTCTCCACCAAGATCATCTCGGTCGATGTCGTTGATCCCACCACGTTCAGTATTCTGAACCGCGACGTCGCCATTGAACCCAACATCCTCCCTTTCTCCGCCACCGTCCCCCTGTCCTCCACCGGCGGGAACGGAGCCGTCACCTGGTCGCTCATTCCCTCGGTCACAACTCTGCCTGGCGCAGACATCGTCGGAAGCACGCTCTCCTTCACCCTGACCTCTCTGGGTGAGTGGGCGATCGGCGTCCGTGCAACCGATCTCCTCGGCAATACCGTCACACGCGTTCTCAGCATCTCGGTCGCCTCGGCTACCGTCGTCTCCATCGTCGACGGCCATGCGCTGATTCAGGTCGCGGCGCTGCAGGGTGAAGTTGGAACCCACCAGTTCACGCTCACCGTCGCCGACTCCACCGCGACCGTGACGCACAATACTTTCAACTACACCGTGGACACGCCGGTCTCCAGTGTCGATATCGCAGAGACTGCGGTCGATCACTTCTGGGGCGCAGGCGACACCACCGAGGTCGTGTACCCCATTGCCGGAGATCTCTCTGGCTTCGCTATCGGCGCTGGCACGCCGGTGACCGCATCGAACGGCCTCACCGCGACAGTTGACCCTACCACCAACTCGCTCATCGTCACCGGCCCACCGACCAAGTTCGGCAACGCTGAGATCGAGCTTCCGATCGCCATCCTGCAGGGCACCACACAGGTCGCCACCATCACCCGCGCGTTCACGCTGGTCTCCTACAACGGAACCAACAACAGCGGAGACATGACCTGCACAACCAAGCCTTACATCGTAGGAGAGGTCGTCGGTCTCAACCCGCAGCGCCCCTACTTCAACTCTCCCAGCATCTTCAAGAACGCAGGCTACAAGGTTCAGGTTGCGCTCAACAGCACGCTCCCACTCGGCCTGTCGCTCGACTCAGTCACCGGCCTGATCTATGGATCCGTGCTTGCCGCCGACGTCGCGCAGTCGACCCTTCAGTACGTCGATTCGACCGGCACCATTCAGGCCACGATCACCGTGGTGTGGGACATCGTCGCCAGCCAGTTCCAGCTGATCGATAACCTCGTCGACGGCCAACTGCAGGCGGCTTACACGGGCACGCTCGGATCGAGCTCCTCGGCACCACTCAGTGGAGTCACGATTCACCGTGGCGTGCTGCCCACCGGCATGGCTTTCGGGATCTCGACGGATGCGAAGTCTGTCACTCTGACCGGCACGCCGACGCAGGCTGGCTACTACGACGTGTGGATCTCGGTGACCAACGCAAACAATCAGGTCGCCTACCTCTACAAGCGCCTCGTGTTCGCGTACATTGCGCCGCTCGTCGTTCAGACGACCTTCCTCCAGAACATCCTCACCGGCGTAGCGTTCTCACAGACCCTCCACGCCACCGGCGGAACTCAGCCTTACACGTGGGCCGTTACCGGCGGCACGCTGCCCAACGGTGTCACGCTCAACGCGAACTCCGGCGTCCTCTCAGGCACTCCTAGCGACGCGGCTTTCAATTCAGACATTACCTTCCAGGTCACCGATGCACGCGGCGTCTCGGCTTCAGCTGCACTGGCTCTGATCATCAACAACACATTGACGATCACGACCCCGGTTCTCCCCGTCATCACCCCCGGCACCAACTACATCTTCCAGGTTCAGGCAGCAGGCGGACAAGGCGCGTACCAGTGGTCACTCGGCTCGGGATCTGCAGCGCTTCCCGGCGGCATCACGCTATCTGCCTCTGGCATCCTGTCCGGAGCCACCAGCCTCAGCAGCTTCTCCGAGAACATCATTGTGCAAGTGACCGATGCGGCCAACAACGTTGCCACGGCGACCTTCCTGCTCGCGATCGGATCAAACTTCGGCCTCATCATCGACACCGAAGGTATCGGCCCCATCGTTCGCGGAGCAACCTACAACGGTCGTCTCAGTGTCATCGGCAACGGTATTGCGCCTTACACCTGGTCGATCGCTGCTGACTCTCCGAACATCCTCCCGCCGGGCTTCACACTTACCGGCGACGCGACCAATCAGGGTGCAACCGCGACGCTCGCCGGACGTACCGTGGCTCAGCTGCTCAATGACTCGGTCAAGGTTCAGGTCGTCGACTCCAACGGAAACTCGGCTGTGACCTTCCTGCCGCTCGACACCTTCTCCGGCCTCTCGGTTGCGACGACCTCGCTGCCCCAGGCAACGGTCACCGGAAACTACTCGGTGCAGCTCTTGGCGAACGGTCTCAACCCACCCTTCACCTGGTCGCTTGATCCCACCTCGCCGCCGCTCCCGAATGGACTCACGATCTCCAGCGGCGGCATCATCTCCGGCGTTCCCACGGCGACAGCAAATCTCACTATCGTGGTTCGCGTAACGGATCATCTCGGAGACTTCGCCACCAAGGGCCTCCAGCTGATTGCGCTCGCCTCCACACTGGCGATCACCTCCACCTCGGTGGCGCAGGCCACTGCAGGCGTTCCCTACAACTTCGCTCTCACCGCGACTGGCGGCGCACCCGGCTACACATGGTCTGTGTCCCCGAACTCTGCCTCAGTTCTGCCAAGCGGACTCAGCATTGATCCTCCGTCCGGCACGATCTTCGGCACCACGCTGGCCTCGGGCTTCTCGAAGAACATCACCTTCCGCGTCACCGACTCGATCGGCGTCGTGCGTGAGGCGACATTCCCGGTTACCGTGCTCGCCGGTATCAAGCTCTTCGCTGGTCCTGACGTCATCGCGGGCTCTTCGCTCAACTCGCTTGGTCTTGTCGCGAATGGAGATGTCACCGCCATCAACCCGCGTCCCAACCTGAGCTTCCTGATCGTAGCGACCAACGTCATCTCGACCTCGCCGTCTGGCTTCAGCTTCGGCGTCCCGGCTGGTTTCAGTGCTTCCTGCGTCTCCCTGGGAACCATCAACCTTTCCGTTGGCTCCCAGACGATCACTCTGCCCAAGTCCGCTGTCTTCGCATTGAGCGGACCCTTTGGTGCGGCAGGGGTGGGGACTCATACCTTCAACTTCTCGGTGTCGGACTCCGGCGTCAACGCCTCAGTCGCTTTCACCTGGACTGTCTACCCCTCTAACGCCATCACTCTCGTGGCCTCAAACGGCGCACTGCCCACACGATAA

Genome Context

Tertiary structure

PDB ID

6313b4ec3b0effcf4bf13a8e61bdc0f060871d2345edecaba81992a37315a703

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,2867

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Tunturi virus isolates and metagenome-assembled viral genomes provide insights into the virome of Acidobacteriota in Arctic tundra soils	Demina,T., Marttila,H., Pessi,I.S., Maennistoe,M.K., Dutilh,B.E., Roux,S. and Hultman,J.	2024	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature