Protein

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Genbank accession
AUR88368.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAVKLTNEFGSRANPSSAAYPSGSLKDETNPGVSNDGTPLSSRVGNDFQGFMQSALAEAGIDANGNPDSVDNPQILNALKKVQENHAASYTDIVYKASGGKSAVENMIIGAEVGNVCSADGTIFKRASSTGGLSDFQSVGPVYLSSFLEIGNTNALPALETCYSTYDHFIIDEDVNITLVEKTIESRTYPAGLNMNLPNKTIEFAKESKMTMDTVIGGRYSMFVVNADNNKIIAPQLIGDKDTHLDDPSAPVGQDEQGYGIRVEANGSNCTLVDPVTNKFWGDGIVWYTSGDGGYIQGKHYSYDCRRQGISVIRCGGLRIDHVVGEEIGVVNGAENGPWSTIDIEPDLADQFIKNISIGTIEGINNKGVCCLLALLALDDSAPFVDITIDNILSRGCKRAFEPRVDKNVKGKIYIKYILGKDSSNQDFQTVNFNNTMQLEIDKLVSVDCNKAGLTSSAFATPVGIYKNFSAESNVGNILIRSLEVINTTFLQHPVSMVNNFDSVDFGAITIEEIILTNSTFNNGAVHNPANAVFKTNSRIRKSFTGIASISNSEWINTIDNTGATGTTVVTVPTNYGYEGMLIELDHTATPEFRVAFADGFERSNAPVRSFAVGDKLLTRRISNQWSIESVAAGQWSQGGYGYYSYGMSAGGATSARPADPTPWMTFFDVNVGSQITYNNSTSRWVKSSDGTPV
Physico‐chemical
properties
protein length:694 AA
molecular weight: 74759,44250 Da
isoelectric point:4,80746
aromaticity:0,08646
hydropathy:-0,22176

Domains

Domains [InterPro]
DC_0060
STR
1–441
DC_0060
AUR88368.1
1 694
Architecture
STR
STR 1-441 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR88368.1
1 694
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9911
Central domain 155 542 389 0,9805
C-terminal 543 694 151 0,9784
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-542
C-terminal
543-694

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.112.O._10N.286.46.B11
[NCBI] 		1881330 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR88368.1 [NCBI]
Genbank nucleotide accession
MG592486 [NCBI]
CDS location
range 31379 -> 33463
strand +
CDS
ATGGCAGTTAAATTGACAAATGAATTTGGTAGTAGAGCAAACCCTTCAAGCGCTGCATACCCATCCGGCTCACTAAAAGATGAGACTAACCCAGGCGTATCAAATGACGGAACGCCTTTATCTTCTCGCGTTGGTAATGACTTCCAAGGATTCATGCAGTCTGCACTTGCTGAGGCTGGCATTGATGCAAACGGGAATCCTGACAGTGTTGATAACCCTCAGATTTTGAATGCACTTAAAAAAGTTCAAGAAAATCACGCAGCAAGTTACACCGACATAGTTTACAAAGCTTCAGGTGGCAAATCCGCTGTCGAAAATATGATCATTGGTGCAGAGGTCGGTAATGTTTGTTCAGCAGATGGAACAATTTTTAAAAGAGCATCTTCCACGGGAGGCTTGAGTGACTTTCAATCAGTCGGCCCTGTGTACTTGAGTTCGTTCTTGGAAATTGGTAATACTAACGCTCTACCAGCATTGGAAACCTGTTACTCAACCTATGACCATTTTATTATTGACGAAGATGTGAATATTACCTTGGTAGAGAAAACGATAGAGTCCAGGACCTATCCTGCCGGCCTTAACATGAACCTGCCAAATAAAACTATTGAGTTTGCAAAAGAATCCAAAATGACCATGGATACGGTTATTGGTGGAAGGTATTCAATGTTTGTTGTCAACGCAGATAACAACAAGATAATTGCACCTCAACTTATTGGTGATAAGGACACTCACCTTGACGACCCTTCCGCTCCAGTTGGCCAGGATGAGCAGGGTTATGGAATACGAGTTGAAGCAAACGGCTCTAATTGCACTCTTGTAGACCCTGTGACAAATAAGTTTTGGGGTGATGGGATTGTATGGTACACATCCGGTGATGGTGGGTATATTCAGGGCAAGCATTACTCTTATGACTGTCGTAGGCAGGGCATAAGCGTTATACGATGTGGCGGTTTGAGGATTGACCACGTTGTAGGCGAAGAGATTGGAGTTGTGAACGGTGCAGAAAACGGGCCTTGGTCAACAATTGATATTGAGCCAGACCTTGCCGACCAATTTATTAAAAACATATCAATAGGGACTATTGAGGGAATCAATAATAAAGGCGTCTGCTGCCTGTTGGCGCTATTAGCACTGGATGATAGCGCACCATTTGTAGACATTACAATTGACAATATACTGTCGAGAGGTTGCAAACGAGCTTTTGAGCCCAGGGTTGATAAGAACGTTAAAGGAAAGATTTACATTAAGTATATCCTTGGTAAAGACAGCTCTAACCAAGACTTTCAAACTGTCAATTTCAACAACACAATGCAACTCGAAATTGATAAACTTGTTTCAGTGGATTGCAATAAAGCAGGTTTGACATCATCTGCATTTGCCACCCCTGTAGGTATTTACAAAAATTTCTCAGCGGAATCTAATGTTGGTAACATCTTAATAAGGTCTTTAGAGGTAATAAATACAACGTTTCTTCAGCACCCGGTATCTATGGTTAACAATTTTGATTCTGTAGATTTTGGGGCCATAACTATTGAAGAGATTATTTTAACGAATTCGACTTTTAATAACGGTGCTGTTCACAATCCTGCAAACGCTGTTTTTAAAACAAACTCAAGGATTAGAAAGTCATTTACTGGTATTGCATCCATTAGCAACTCCGAATGGATTAATACTATAGATAACACAGGCGCGACAGGTACAACTGTCGTCACCGTACCTACGAATTATGGGTACGAGGGTATGCTTATTGAACTGGATCACACCGCAACACCAGAGTTTAGGGTTGCATTTGCGGACGGTTTTGAGCGATCTAATGCACCAGTTCGTTCGTTTGCTGTTGGTGATAAGCTTTTGACTCGCAGGATTTCAAATCAATGGAGTATTGAGTCTGTAGCTGCTGGGCAATGGTCACAGGGTGGTTATGGGTATTATTCATACGGAATGAGCGCGGGTGGTGCAACCTCAGCTAGACCTGCTGACCCGACACCGTGGATGACATTTTTTGATGTTAACGTCGGCTCTCAGATAACATATAACAATTCGACTAGTCGGTGGGTTAAATCTTCTGACGGAACACCAGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a9c639fff8a36fef23be41d6d39ff796590787facc825447b714ba1c1fddeb43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7672
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank