Protein

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Genbank accession
AWN09171.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSASDKSLTKDEIRARYFERDLPIDRHGNYMERIGAQDQGRTGFCALLHYHLIEGMSDKDALAKMKLYEMSAIEANFTLKRAKEFISDVLEIDLDDIRKNMKSTARYIYEDVQKMLQELDHRYEDQRHGFIEFEGCHFQADENSRSILGQYIQANHAPEYWLDTTNTRIEPFSVEQCQALLAAIVQRDQELHATMSDAKKQIRVLAEARDFTGLKALQEQLGM
Physico‐chemical
properties
protein length:223 AA
molecular weight: 25916,96910 Da
isoelectric point:5,31026
aromaticity:0,08520
hydropathy:-0,62287

Domains

Domains [InterPro]
DC_0377
STR
7–110
DC_0377 IPR025484
IPR025484
STR
121–207
IPR025484
AWN09171.1
1 223
Architecture
STR
STR 7-207 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPAsTU
[NCBI] 		2136797 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWN09171.1 [NCBI]
Genbank nucleotide accession
MH221129.1 [NCBI]
CDS location
range 239779 -> 240450
strand +
CDS
ATGTCTGCTTCTGACAAAAGCCTGACGAAAGATGAAATTCGCGCTCGTTATTTTGAGCGCGATTTACCTATCGACCGGCACGGTAACTACATGGAGCGTATCGGGGCACAAGACCAGGGTCGTACCGGGTTCTGTGCGCTGTTGCATTACCATTTGATCGAAGGTATGTCCGACAAAGACGCACTGGCCAAGATGAAACTGTACGAAATGTCAGCCATCGAAGCCAACTTCACACTGAAACGTGCAAAAGAGTTCATTTCCGATGTTCTGGAAATCGACCTGGACGACATTCGTAAGAACATGAAGTCCACCGCACGTTACATCTACGAAGATGTGCAGAAGATGCTGCAGGAGTTAGACCACCGCTACGAAGACCAACGTCACGGATTCATCGAGTTCGAAGGGTGTCATTTCCAGGCGGATGAAAACTCCCGTTCTATCCTCGGGCAATACATCCAGGCGAACCATGCTCCGGAATACTGGCTTGACACCACCAATACACGCATTGAGCCGTTTAGCGTGGAACAGTGTCAGGCGCTGTTAGCTGCCATTGTACAGCGTGACCAGGAACTCCACGCGACGATGTCAGACGCGAAGAAACAGATTCGTGTACTGGCAGAAGCGCGGGACTTCACCGGCCTGAAAGCGTTGCAAGAACAGCTTGGCATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c5dc055b6ff9c406008e919d46c94f784c485de0557fe200c00c8d15de64b9e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8532
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence for lytic Bacteriophages STsAS and SPAsTU against Salmonella enterica serovar Typhi and Paratyphi A Sanirbandha,C., Yukgehnaish,K., Sivachandran,P., Lee,S.Y., Lalitha,P. and Ravichandran,M. — — GenBank