Protein

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Genbank accession
YP_009277205.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MATDIFQFQGTIKLRRGLAAEWTSYNPILAEGEFGVELDTSTFKIGNGVLHWVDLPYAGSPGPAGPAGADGTNGRDGTDGTNGVDGAKGDKGDTGTFTADVMASLPSADSLGLADQFPVLQGPTAKKATIQNLKDRVTSSDNVWTGDNKFQSAPILGMIDLYTTPQSGTVNVNWSQGGFTRLRFGGNSAVSFLGPFVANEVYEMIFEVSATGTGYVIAWPANTKWPNGTVVSLTPGGVDYIRFITIDGGLTFQAFVMGKDMKGA
Physico‐chemical
properties
protein length:264 AA
molecular weight: 27738,66080 Da
isoelectric point:4,61006
aromaticity:0,10227
hydropathy:-0,12652

Domains

Domains [InterPro]
DC_0999
STR
1–261
DC_0999
SSF69349
STR
12–98
SSF69349
IPR041352
ATT
12–49
IPR041352
YP_009277205.1
1 264
Architecture
STR
ATT
STR
STR 1-11 | ATT 12-49 | STR 50-261 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ralstonia phage RSP15
[NCBI] 		1785960 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009277205.1 [NCBI]
Genbank nucleotide accession
NC_030948 [NCBI]
CDS location
range 164198 -> 164992
strand -
CDS
ATGGCAACAGATATTTTTCAGTTTCAAGGAACCATCAAACTACGTCGCGGGCTTGCAGCAGAGTGGACAAGTTATAACCCAATCCTAGCAGAGGGCGAATTTGGGGTTGAACTTGATACTTCCACATTCAAGATCGGAAATGGTGTCTTGCATTGGGTGGACTTGCCTTATGCTGGTTCTCCCGGCCCTGCCGGTCCTGCGGGTGCTGATGGCACTAACGGTAGAGATGGAACAGACGGCACAAATGGTGTAGATGGCGCAAAGGGCGATAAAGGGGACACAGGAACTTTTACGGCTGACGTTATGGCTAGCCTACCTTCTGCCGATTCTCTTGGCTTGGCGGATCAATTCCCGGTCCTTCAAGGCCCTACAGCCAAGAAGGCAACAATTCAGAATTTGAAGGATCGTGTAACGTCTTCTGATAATGTTTGGACGGGTGATAATAAATTCCAGTCTGCGCCCATTCTTGGGATGATTGATCTTTACACGACGCCACAAAGCGGAACTGTGAATGTCAATTGGTCACAGGGTGGTTTCACAAGATTGCGTTTCGGTGGTAATTCAGCAGTCTCTTTCCTAGGCCCATTTGTTGCAAATGAAGTCTATGAAATGATTTTTGAAGTGAGTGCTACCGGAACCGGCTATGTAATTGCATGGCCTGCAAATACAAAATGGCCCAATGGCACGGTAGTTTCTCTAACTCCGGGTGGTGTGGATTACATTAGATTCATCACAATTGATGGCGGATTGACTTTCCAAGCCTTCGTGATGGGTAAAGATATGAAAGGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba8831700e1fbd6466ba7260ac26e14796ccb434d443ba0e4c1f41bad4fbb4c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8174
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a phage RSP15 infecting the phytopathogen Ralstonia solanacearum Kawasaki,T., Fujie,M., Chatchawankanphanich,O., Ogata,H. and Yamada,T. 2010-03 — GenBank