Protein

View in Explore
Genbank accession
WPK28660.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MADLKAGSTTGGAVIWHQGNFPLMPAGDDVLYKTFKLYSEYNKPQAADNDFVSKANGGTYASKVTFNNGVQIPYAINNTNQSGIYPGNGDAATFVTANIDIVSWYGIGFKSSQGTAGRTVVINTRNGDINTKGVVSASGQVRSDMTAPVAANDLTRKDYVDGRINIVTDNANSRVLRKGDTMTGNLTAPNFFSQNPASEANHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23724,95440 Da
isoelectric point:6,72027
aromaticity:0,09955
hydropathy:-0,38281

Domains

Domains [InterPro]
DC_0466
STR
1–219
DC_0466
IPR005601
STR
56–195
IPR005601
WPK28660.1
1 221
Architecture
STR
STR 1-219 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK28660.1
1 221
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,4343
Central domain 121 210 91 0,1881
C-terminal 211 221 10 0,8063
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-210
C-terminal
211-221

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_EP32a
[NCBI] 		3090671 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK28660.1 [NCBI]
Genbank nucleotide accession
OR544954 [NCBI]
CDS location
range 27278 -> 27943
strand -
CDS
ATGGCCGATTTAAAAGCTGGTAGTACAACTGGCGGTGCTGTTATATGGCACCAAGGTAATTTCCCTTTAATGCCAGCAGGTGATGACGTCCTGTATAAAACGTTTAAACTCTATTCAGAATATAATAAACCACAAGCTGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGTACGTATGCATCAAAGGTAACATTTAATAACGGCGTGCAAATACCATATGCTATAAACAATACAAATCAATCTGGTATTTATCCTGGTAATGGAGATGCAGCTACTTTTGTTACAGCAAATATTGATATTGTTTCGTGGTATGGTATTGGTTTTAAATCATCACAAGGAACAGCGGGTAGAACTGTAGTAATCAATACACGTAATGGCGATATTAATACAAAGGGCGTTGTATCTGCTTCAGGACAAGTAAGAAGCGATATGACTGCTCCGGTTGCAGCAAATGATCTCACAAGAAAAGATTATGTTGATGGACGAATAAATATTGTTACGGATAACGCAAATTCCCGTGTATTGCGTAAAGGCGATACCATGACAGGTAACTTAACTGCACCAAACTTTTTCTCACAGAATCCGGCGTCTGAGGCTAATCATGTTCCTCGTTTCGACCAGATTGTAATTAAAGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9bdc6c0e9fc2459ffe47aad2941f59da81fb38c03a0c8b8d1a371a06a04a9638
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6995
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequencing of NWU_EP_32a Oluwarinde,B.O., Montso,P.K. and Ateba,C.N. 2024-10-22 — GenBank