Protein

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Genbank accession
QGZ17763.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGGVVKSVVKAVSSVAKVIRVGNFLSGMNPFVALGVFAVGWLFMRSMKPEVPDFGTNDFEETERGILVNKQSNNASIPVIYGERLVGGTRVFIETSGTDNEFLYIALVLSEGEINAITEIRVDDKVVTFSGALSDNTQRTVASSDSNFYKDGASYITIEPHFGSDGQSASSLLSTLSSWGSNHKLSGVCYLALKFKWNSDIFGGIPVVQAKVQGKKVVTLDASLNESSATFSTNPAFCLLDYLRNERYGKGIATANIDLQSFRDASQVCITQVTPFSGGSDINIFDTNAVIDTSKKVIDNVRDIVKGMRGYLPYVQGKYKLVIETTGSASVSLTEDDIIGGYNLASPSKNSKYNRVICSYINPDRNFQVDEVQYPAIDDSGYSTADKHATMKSADGGFLLEGRFDFKTITSTYQAEEMAEIILRRSRESLGLSITCGFKAYELHIGDIVNITLSSVGFSTKAFRVLSMTFNADYTISLQLVEHQDSHYTWASKGQVASTPSTNLPNPFSIQPPASITLSDEMIEYADGVVLTRLNIQIGASTDQFVQYYQVEAKQSTESNFKIISNGTQLLHELLNAVDDATYDVRVKAINSFGVSSSYISASRKIVGATEIPNNVDDLSVSMVGSNQMELSWTPVTDLDISWYEVRYQDVQSGSTWNDSTPLAKVVRRKSNSLVVNAQTGSFLIKAVDKLGNASAEASIVTTNISGLQSFKNILTVSE
Physico‐chemical
properties
protein length:719 AA
molecular weight: 78293,02660 Da
isoelectric point:5,10553
aromaticity:0,09040
hydropathy:-0,09583

Domains

Domains [InterPro]
DC_0187
STR
1–717
DC_0187
IPR053171
Unmapped
459–704
IPR053171
IPR013783
STR
534–610
IPR013783 IPR013783
IPR036116
STR
542–692
IPR036116
IPR003961
STR
613–703
IPR003961
QGZ17763.1
1 719
Architecture
STR
STR 1-717 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC026P
[NCBI] 		2686456 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGZ17763.1 [NCBI]
Genbank nucleotide accession
MN698240.1 [NCBI]
CDS location
range 21801 -> 23960
strand +
CDS
ATGGGTGGAGTAGTAAAAAGTGTTGTAAAAGCTGTATCTAGTGTTGCTAAAGTAATTAGAGTAGGTAACTTTTTAAGTGGCATGAATCCTTTTGTAGCTTTAGGTGTATTCGCTGTTGGTTGGTTATTTATGAGATCAATGAAGCCTGAAGTACCTGACTTTGGTACAAATGATTTTGAAGAAACAGAGAGAGGTATATTAGTAAATAAACAATCTAACAATGCTTCTATTCCTGTAATTTATGGAGAAAGACTTGTTGGTGGAACAAGAGTATTTATAGAAACATCAGGAACAGATAATGAATTTTTATATATAGCTTTAGTCTTATCTGAGGGAGAGATTAATGCTATTACAGAAATAAGAGTTGATGACAAAGTAGTAACATTTAGTGGTGCATTAAGTGATAATACTCAAAGAACAGTAGCAAGTTCAGATAGTAATTTTTATAAAGATGGTGCTAGTTATATTACGATAGAGCCACATTTCGGTAGTGATGGACAGAGTGCATCAAGTTTATTATCTACATTATCATCATGGGGTAGCAATCATAAACTATCAGGTGTTTGTTATCTAGCATTAAAGTTTAAATGGAACTCAGATATATTTGGTGGGATTCCTGTTGTTCAAGCAAAAGTACAGGGTAAAAAAGTTGTTACTTTAGATGCAAGTTTAAATGAGTCATCTGCAACATTTTCTACTAATCCAGCATTTTGTTTATTAGATTATTTAAGAAACGAAAGATATGGAAAAGGTATTGCAACAGCTAATATAGATTTACAATCTTTTAGAGACGCATCACAAGTTTGTATAACTCAGGTAACACCATTTTCAGGTGGAAGTGATATTAATATATTTGATACAAATGCAGTTATAGATACATCAAAAAAAGTAATTGATAATGTCAGAGACATAGTAAAAGGTATGAGAGGTTATCTTCCATATGTTCAGGGCAAGTATAAATTAGTTATAGAAACAACAGGGTCAGCTTCAGTATCACTTACAGAAGATGATATTATTGGTGGATATAATTTAGCATCGCCATCTAAAAATTCTAAATACAACAGAGTTATTTGTTCTTATATTAATCCTGATAGAAACTTCCAAGTAGATGAAGTTCAATATCCAGCTATAGATGATAGTGGTTATTCAACAGCAGACAAACACGCAACTATGAAATCAGCAGATGGTGGATTTTTATTAGAGGGTAGATTTGATTTTAAAACTATTACATCAACCTATCAGGCTGAAGAAATGGCTGAGATTATTTTAAGAAGATCAAGAGAAAGTTTAGGTCTTAGTATTACTTGTGGATTTAAGGCATACGAATTACACATAGGAGATATAGTAAATATTACATTATCTAGTGTTGGTTTTTCTACAAAAGCTTTTAGAGTTTTATCAATGACATTTAATGCTGATTACACAATCAGTTTGCAATTAGTAGAACATCAAGACTCACATTATACTTGGGCATCAAAAGGACAGGTTGCTAGTACACCATCAACAAACTTACCAAATCCCTTTTCTATTCAGCCACCAGCATCAATTACATTATCAGATGAAATGATTGAGTATGCAGATGGTGTTGTATTAACAAGATTAAATATTCAAATAGGTGCAAGTACAGACCAATTTGTTCAGTATTATCAAGTAGAAGCAAAACAAAGCACAGAGTCTAATTTTAAAATAATATCAAATGGTACACAGTTATTGCATGAATTACTTAACGCTGTTGATGATGCTACATACGATGTAAGAGTAAAAGCTATTAATAGTTTTGGTGTATCTTCAAGTTATATATCAGCAAGTAGAAAAATTGTAGGTGCAACTGAAATACCTAATAATGTTGATGATCTTTCTGTATCTATGGTTGGGTCAAATCAAATGGAGTTATCTTGGACACCTGTAACAGACTTAGATATTAGTTGGTATGAAGTAAGATACCAAGATGTTCAAAGTGGTTCTACATGGAATGATAGTACACCACTTGCTAAAGTAGTTAGAAGAAAATCTAACTCACTTGTAGTAAATGCACAAACAGGTAGCTTTCTAATTAAGGCAGTAGATAAACTTGGTAATGCAAGTGCTGAAGCTTCTATTGTGACTACTAATATTTCAGGGCTTCAATCTTTTAAAAATATATTAACTGTGAGTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19f362d8654292db292ae3fb30e4a92984a86e5c0e4eefd076b477542a149db9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8583
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel pelagiphages prevail in the ocean Zhang,Z., Qin,F., Chen,F., Chu,X., Luo,H., Zhang,R., Du,S., Tian,Z. and Zhao,Y. 2019 — GenBank