Protein

View in Explore
Genbank accession
YP_010062569.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MRLRGFPTDGRPAVSYVGSPTGSILGIPQNLIGKVSVSQQRPRSLLSIPTDTPRGVISRHPTTGRLLAVPGRPGPQGPQGPKGDGLRIDGQVPTYAELPGSASDGDVWLAGGKLYRYDNGWPDESAGTQVQGQEGPRGPQGIAGPQGPVGPQGPQGLKGDTGPRGPEGPEGPEGPRGLQGEQGVQGPIGPKGDTGSQGPKGDVGPQGEQGLQGIQGPVGPKGDKGDKGDTGNQGPQGPQGPRGFTGDTGQTGDDGPPGPEGPPGPEGPQGPAGPKGDLGPQGPQGLQGPKGDKGDKGDTGSQGPQGIQGPQGIQGPQGPYGYLSSDATVLDFRRMTQAQYNALGAGRPATTFYVIVG
Physico‐chemical
properties
protein length:357 AA
molecular weight: 35709,71860 Da
isoelectric point:5,59042
aromaticity:0,03922
hydropathy:-0,89524

Domains

Domains [InterPro]
IPR050149
Unmapped
61–319
IPR050149 IPR056923
DC_2298
STR
75–177
DC_2298 DC_0656 G3DSA:1.20.5.320
IPR008160
STR
131–187
IPR008160 DC_2298
DC_2298
STR
164–218
DC_2298 IPR008160
YP_010062569.1
1 357
Architecture
STR
STR 75-357
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage LeoAvram
[NCBI] 		1916120 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mycolicibacterium smegmatis
[NCBI] 		1772 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010062569.1 [NCBI]
Genbank nucleotide accession
NC_054796 [NCBI]
CDS location
range 1645 -> 2718
strand +
CDS
ATGAGGCTGCGCGGATTCCCGACTGACGGTCGGCCGGCGGTCTCCTACGTCGGCTCCCCCACCGGTTCCATCCTCGGAATCCCTCAGAACCTAATCGGCAAGGTCTCGGTGTCGCAGCAGCGGCCCCGCAGCCTGCTGTCGATCCCGACTGACACGCCTCGCGGCGTCATCAGCCGCCACCCGACCACGGGTCGTCTGCTCGCGGTGCCCGGAAGACCGGGCCCGCAAGGACCGCAAGGTCCCAAGGGCGACGGCCTCCGCATCGACGGCCAGGTCCCCACGTATGCAGAGCTTCCTGGTTCAGCCTCGGACGGAGATGTGTGGCTCGCGGGCGGCAAGCTGTACCGCTACGACAACGGCTGGCCCGACGAGTCTGCCGGAACCCAGGTCCAAGGCCAGGAGGGACCGCGAGGACCGCAAGGCATCGCGGGCCCGCAGGGCCCAGTCGGCCCGCAGGGGCCGCAGGGTCTCAAGGGTGATACCGGTCCTCGAGGCCCCGAAGGTCCGGAAGGACCGGAGGGCCCGCGTGGTCTGCAGGGTGAGCAGGGTGTCCAGGGTCCGATAGGACCCAAGGGTGACACCGGCTCCCAGGGACCTAAGGGTGACGTAGGCCCCCAGGGTGAGCAAGGTCTCCAAGGCATTCAGGGCCCGGTCGGCCCGAAGGGCGACAAAGGCGACAAGGGCGACACGGGCAACCAAGGCCCGCAAGGGCCGCAGGGCCCGCGTGGCTTCACAGGCGACACCGGTCAGACCGGCGATGACGGTCCTCCCGGACCCGAAGGCCCACCAGGACCGGAAGGTCCACAAGGTCCTGCGGGACCGAAGGGTGACCTCGGACCGCAAGGACCTCAGGGCCTGCAGGGTCCGAAGGGTGATAAGGGCGACAAGGGTGATACGGGATCGCAAGGCCCACAGGGCATTCAGGGTCCGCAAGGTATCCAGGGGCCGCAGGGCCCCTACGGCTACTTGTCCTCGGACGCAACGGTTCTCGACTTCCGCAGGATGACGCAAGCCCAGTACAACGCGCTCGGAGCAGGAAGGCCAGCAACGACGTTCTACGTGATCGTGGGGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4ea9223daf5836c29636aaa83a0f3cf9e4a9123c703a8f25b57a5772bc0f7a68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6645
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome Sequence of Mycobacteriophage LeoAvram Temple,L., Nehra,K., Jamdagni,P., Agamy,D., Rana,J.S., Garlena,R.A., Russell,D.A., Pope,W.H., Jacobs-Sera,D. and Hatfull,G.F. 2023-06 — GenBank