Protein

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Genbank accession
XRQ67179.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,50
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGVEVVAALVIAAVSAAASVYVSVEAKKQAKKAAEQARKSASRDAQKYMFKSAVAAKQIVLGHPVLSGPMIFAAEEGTPNDAGEGEWVHFIVHIAGHVCDDVTHAWLDDVRLVRHQATVSGADIEFRHENGLGFVYIYLGEQTQAPPTLAHLPDWNANMIGREQCFAHVKLQSNPSKWAGGLPNPKFAVRGLKVFDPRTNQTAWTDNPALLVRWYRNALKQGVAMDDTYITSANICDEIVATPEGGQEKRYRCNYAFMADQAPRTILSTIRATCDGISLRVAGRHAFQVGAYYGPGITTLTEDDIVGDITTMPDVRRRDRINTISAKYTDPLSNWNEVDMPRVVHEGYLAQDGYEVVDDLDLRAVPSPYQAQRLALIQILTTRDAMSIEFTSNLRGTRLLPGSVFKLNLPENEWDGVEFIVSKWKYSTNGLVTLVAKQTKPSHYAFNGDTAKVPSRPGVPSLVSRDVPPVTNLSYSTLADSNTLQAVITWQHKSLGISTFELSFYKDGEFLRKELTVDKQYRLQDGFEVGQYQVQVVAISYERRSPVASLVFNASAPQTPIGIDVKAENWALGLTPVSAGLVNFDTMYDFALGFEQGATDEQVEQYIVGRAKVITVSNLRANTTYQIAVREVSRWGKSGWYRSSAQTTFNSDDVLELIDGKVTQEMLDGNLNDFLSEVDERSKETQESVADLDISLGRIQDLNSTLSLSVLGLTSSVAAMEDEYQRRFLNGEALIGAVVQVDPETGKIVNLAFNYTEQKFTQAGLLIDGVEASVKIQAQEIQRVEQETGDRITEAEAQILVNADQIALKASYTEVNEIVAGALDAITPARSWQFNTTNEGWTGATWVAGGYVTGTAFSIAGLDINADENPAFRIRVQSSSAGTLSWNGGAQNVALKQPADPSQFEVIILTLTAADGWTGIVQSLEINFDATIDFIEVGKPSAAEQALEDLTARTTHIEQVLDPANARWGIYITQEYWDGNALKLSDVQQEIDAYDARWGVSATIQELSANGTIDKANSAQTWVDAANANITDVVTSYVSQPGGINDQLEEADSRLNSAQQEIDALEGSITQTITSLSDVQGALGLDEDAGFNDIMGAYKDFLAKQEFQEQKISFAYAEQKISANSTAIASQAQRTLELAAFQNEQQATLTQVQRAIATQEQALADSVEQLTAKIETDDAEVLASANEYTRAAVGYCVDAQGNITSETDAVLCVQAGHNWIQGPLAEYIRNLSIQNAAGETATISDMMQAFENEEGKLIVRGGMTVNNQGKISGFVNTNDGTLSQTDFIADFFRIGTMNGENFEPVFGLDAVSRKLVLKGRLILDDGSLISNKDELQGKDGTIWGTLKLRDGIFPSDALATADFTARYGRAPILDDMLTYVSNDGSVSSTKSYNGTAWVAPALRLSGDLITPGTIFGDRFVAGSELTAPVIKGGEAYFGKEAGAPFDGYHTKISQDGLIQTDRIQATGGDFDNVTIGENCDILGRLSVSQLDGDVIKPYKFNVPEVNSGSGLVRVLYSINIAATTWDREVVWGGVYLTSFGCWIDYLVDGVVIYTASIGGLSAQVSPPWTHTLPAGKSYVVSMRIRNLETNRWDVWQSSGLVLTYKS
Physico‐chemical
properties
protein length:1606 AA
molecular weight: 174935,37300 Da
isoelectric point:4,64326
aromaticity:0,08406
hydropathy:-0,19110

Domains

Domains [InterPro]
DC_0187
STR
1–832
DC_0187 Coil IPR057549
Coil
Unmapped
24–44
Coil IPR057587 DC_1333
Coil
Unmapped
767–787
Coil
XRQ67179.1
1 1606
Architecture
STR
ATT
STR
STR 1-558 | ATT 559-659 | STR 660-1605 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRQ67179.1
1 1606
Domain Start End Length (AA) Confidence
N-terminal 1 835 835 0,8720
Central domain 836 1505 671 0,1452
C-terminal 1506 1606 100 0,9145
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-835
Central
836-1505
C-terminal
1506-1606

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB-Vv-ZX4290
[NCBI] 		3416015 Viruses > unclassified bacterial viruses >
Host Vibrio vulnificus
[NCBI] 		672 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRQ67179.1 [NCBI]
Genbank nucleotide accession
PV485168.1 [NCBI]
CDS location
range 28956 -> 33776
strand +
CDS
ATGGGTGTAGAAGTAGTAGCGGCGCTGGTTATTGCGGCCGTTTCCGCCGCGGCAAGTGTTTACGTTTCGGTTGAGGCGAAAAAGCAAGCGAAGAAAGCCGCAGAGCAGGCAAGAAAATCCGCAAGCCGAGATGCGCAAAAGTACATGTTCAAGAGTGCAGTGGCGGCAAAGCAAATTGTGCTTGGTCATCCTGTGCTTTCTGGGCCTATGATTTTTGCAGCAGAAGAAGGCACGCCAAACGATGCAGGTGAAGGCGAATGGGTTCACTTTATCGTTCATATCGCAGGTCACGTTTGTGATGATGTGACGCATGCATGGCTTGATGATGTTCGATTGGTTCGACATCAAGCGACAGTGTCAGGTGCAGATATCGAGTTTCGCCACGAAAATGGCCTAGGGTTTGTTTACATCTATCTTGGTGAGCAAACGCAAGCGCCACCAACGCTGGCACACTTGCCAGACTGGAATGCCAATATGATTGGCCGTGAGCAGTGCTTTGCTCATGTCAAGCTTCAATCTAACCCATCAAAATGGGCAGGTGGCCTTCCTAACCCTAAATTTGCTGTGCGCGGATTAAAGGTGTTTGACCCTCGCACCAACCAAACCGCATGGACAGACAACCCTGCTTTGCTCGTTCGCTGGTATCGCAACGCCCTTAAGCAAGGTGTGGCGATGGACGATACTTACATCACCTCTGCCAACATTTGTGATGAAATTGTCGCAACGCCAGAGGGCGGACAAGAGAAGCGCTATCGCTGTAACTATGCATTCATGGCCGACCAAGCGCCAAGAACCATTCTTAGCACGATTCGCGCAACGTGTGATGGTATTAGTTTGCGCGTGGCTGGCCGTCATGCTTTTCAGGTTGGTGCTTATTATGGCCCAGGCATCACAACGCTGACGGAAGATGACATTGTTGGCGACATTACGACAATGCCAGATGTCCGTCGTCGCGATCGCATTAATACCATCTCAGCCAAATACACAGACCCGCTTTCAAACTGGAATGAAGTAGACATGCCTCGCGTAGTGCATGAGGGTTATTTGGCTCAAGATGGCTATGAGGTGGTGGATGACTTAGATCTTCGCGCTGTGCCAAGCCCGTATCAAGCACAGCGCTTGGCGCTTATTCAAATCCTCACCACTCGCGATGCGATGTCTATCGAGTTCACCTCAAACTTGCGTGGTACGCGCTTATTGCCTGGTTCCGTGTTTAAGTTGAACTTGCCAGAAAACGAATGGGATGGCGTGGAGTTCATCGTTTCCAAGTGGAAATACAGCACTAATGGCTTGGTGACGTTGGTGGCCAAGCAAACCAAGCCTAGCCATTACGCATTCAACGGCGATACAGCGAAAGTGCCATCGCGCCCGGGTGTGCCTTCTTTGGTAAGCCGCGATGTGCCGCCAGTAACCAATCTTTCCTATTCTACGCTGGCGGATTCAAACACCCTTCAGGCGGTCATTACTTGGCAGCACAAGAGCTTGGGCATTTCCACGTTTGAACTGAGCTTTTATAAAGATGGCGAGTTCCTGCGCAAAGAGCTGACGGTTGATAAGCAATACCGCCTTCAAGATGGCTTTGAGGTTGGCCAGTATCAAGTTCAGGTCGTGGCAATCAGCTATGAGCGCCGCTCGCCAGTAGCTAGTTTGGTGTTTAATGCCTCAGCACCACAAACGCCAATCGGCATCGATGTGAAGGCTGAAAACTGGGCGTTGGGTTTAACGCCTGTAAGCGCTGGTTTGGTGAACTTTGACACCATGTATGACTTTGCCCTTGGTTTTGAGCAAGGCGCAACTGATGAGCAAGTGGAGCAATACATCGTTGGCCGCGCCAAGGTCATTACGGTGAGCAACCTAAGGGCCAATACCACCTATCAAATTGCGGTGCGCGAAGTCTCTCGTTGGGGTAAATCTGGCTGGTATCGTTCAAGTGCGCAAACCACTTTTAACAGCGATGACGTCTTAGAGCTTATTGACGGTAAAGTCACGCAAGAGATGTTAGATGGCAATTTAAACGACTTTCTAAGCGAGGTTGATGAGCGTTCAAAAGAGACGCAAGAAAGCGTGGCCGATTTGGACATCAGTCTTGGCCGTATCCAAGATCTCAACTCCACACTGTCTCTCTCTGTGCTTGGCCTAACCTCTTCCGTTGCAGCAATGGAAGACGAATATCAACGCCGATTCCTTAATGGAGAAGCGTTGATTGGTGCGGTGGTTCAGGTTGACCCAGAGACAGGCAAAATCGTTAACCTTGCGTTCAACTACACCGAGCAAAAATTCACGCAAGCGGGATTGCTTATTGATGGCGTTGAGGCTTCGGTAAAGATTCAAGCGCAAGAGATTCAACGCGTAGAGCAAGAAACGGGCGACAGAATCACCGAGGCCGAGGCTCAGATTTTGGTGAATGCCGATCAGATTGCGCTCAAAGCAAGCTATACCGAAGTCAATGAGATTGTTGCAGGCGCGCTCGATGCCATCACGCCCGCGCGTTCTTGGCAGTTCAATACCACAAACGAAGGTTGGACGGGTGCCACATGGGTAGCGGGCGGCTATGTAACAGGTACGGCGTTTTCTATCGCTGGCCTAGATATCAATGCAGACGAAAACCCAGCATTCCGCATTCGTGTGCAGTCATCATCAGCGGGTACGTTAAGCTGGAACGGCGGCGCGCAAAATGTGGCCTTGAAGCAGCCAGCAGACCCAAGCCAGTTTGAGGTGATCATACTTACACTCACTGCCGCAGATGGCTGGACGGGCATAGTTCAATCGCTTGAAATTAACTTCGATGCCACCATCGATTTCATTGAGGTGGGCAAGCCTTCGGCGGCAGAGCAAGCGCTAGAAGACTTAACGGCAAGAACAACGCACATCGAACAGGTGTTAGATCCTGCCAATGCTCGCTGGGGAATTTACATCACCCAAGAATATTGGGATGGCAATGCACTAAAGCTTAGCGACGTTCAGCAAGAGATTGACGCCTATGATGCGCGATGGGGTGTTTCCGCGACCATTCAGGAGCTAAGCGCCAACGGCACAATAGACAAAGCAAACAGCGCTCAAACATGGGTAGATGCCGCAAACGCCAACATTACCGACGTGGTAACAAGTTACGTCTCTCAGCCAGGTGGCATTAATGACCAGTTGGAAGAGGCAGATTCGCGCCTTAACAGCGCTCAGCAAGAGATTGATGCGCTTGAAGGCTCCATCACGCAAACTATTACTAGCCTTTCGGATGTTCAGGGCGCGCTAGGTTTGGATGAGGATGCAGGCTTTAACGACATCATGGGTGCGTATAAGGATTTTTTGGCTAAGCAAGAATTTCAGGAGCAAAAGATTTCGTTCGCTTACGCGGAGCAAAAAATCAGTGCCAACTCAACGGCCATTGCCTCTCAAGCACAAAGAACGCTAGAGCTTGCGGCGTTTCAGAATGAGCAGCAAGCCACCTTAACGCAAGTGCAACGAGCAATAGCAACGCAAGAACAAGCGCTGGCAGATAGCGTTGAGCAGCTCACCGCCAAGATTGAAACGGACGATGCAGAGGTGCTAGCCAGCGCCAATGAATACACACGCGCTGCGGTGGGCTATTGCGTAGACGCGCAAGGCAACATCACTTCAGAGACGGATGCGGTTTTGTGTGTTCAGGCTGGCCATAACTGGATCCAAGGGCCGCTTGCTGAATACATTCGCAACTTATCCATTCAGAACGCGGCGGGCGAAACGGCCACCATTTCGGACATGATGCAAGCCTTTGAAAATGAGGAAGGCAAATTGATTGTTCGCGGCGGTATGACGGTGAACAATCAGGGCAAGATTTCCGGCTTTGTAAACACCAATGACGGCACGTTATCTCAAACAGATTTCATCGCTGATTTCTTCCGTATTGGCACAATGAATGGCGAGAACTTTGAGCCAGTATTTGGTCTCGATGCTGTAAGCCGAAAGCTAGTGCTAAAGGGGCGATTGATTCTTGATGATGGCTCGCTCATCTCAAATAAAGATGAACTGCAAGGCAAGGATGGCACCATTTGGGGAACGCTAAAGCTGCGTGATGGTATTTTCCCAAGTGATGCGCTTGCAACGGCAGACTTTACCGCGCGATATGGCCGAGCGCCAATACTCGATGACATGCTCACGTACGTCAGCAATGATGGCTCAGTGTCGAGCACAAAAAGTTACAACGGCACAGCTTGGGTAGCTCCAGCGTTGAGGCTAAGCGGAGACCTAATCACACCAGGGACAATCTTTGGCGATCGCTTTGTCGCAGGAAGTGAACTGACTGCGCCAGTTATTAAAGGTGGCGAGGCGTACTTTGGCAAAGAGGCTGGCGCGCCATTTGATGGCTATCACACCAAGATTTCGCAAGATGGCCTGATTCAAACGGATAGAATTCAGGCGACAGGTGGGGATTTCGATAATGTCACCATTGGTGAGAATTGCGACATTCTAGGCCGTTTATCTGTATCGCAGCTTGATGGGGACGTGATAAAGCCTTACAAGTTCAACGTTCCAGAGGTTAACAGTGGCTCTGGATTGGTCAGAGTTCTCTATTCAATAAATATCGCTGCAACAACTTGGGATAGAGAGGTTGTTTGGGGCGGCGTTTATTTGACCTCATTTGGTTGCTGGATCGATTATTTGGTGGATGGTGTTGTTATTTACACGGCCAGCATTGGCGGTTTGAGCGCTCAAGTTTCTCCGCCATGGACTCACACGCTCCCGGCAGGTAAAAGTTATGTCGTAAGCATGAGGATTAGAAATTTGGAAACAAACAGGTGGGATGTGTGGCAGTCATCTGGTTTAGTTTTAACGTATAAATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8552d33ea9d1dc9db336bffec38eb0e2e6884a923383f077717c1c4c381c7262
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7239
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50