Protein

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Genbank accession
XKC24404.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MVTKTVIPTDITKLKTDVQSVTSDVSTLKQDTTTLKSDVSTLKQDTSTLKSDVSTLKSDVGNLKTREIVNTDWTAQRPQNQQNDSSSNFGTGYKLISQGIDLDGKTYTASLEMVRVRSDGIINARINVVNAAGNSIYYDFNDNGEIVIPPRQNIGPRRLRIANDGTSTLDGRLNMWGVSTRPDVFEYGWSNGYGFYMQRNTDDSKELHVNGNITSFNVSAGSDRDLKENIQVIDNATDRLRKMYGYTYTLKCDGMPYAGVIAQEAMEAIPEVVGGMTVYTEEDKEIGTRYLTVNYSGIVGLLVQVCREADDRITKLETEIEELKILVNKLISQ
Physico‐chemical
properties
protein length:333 AA
molecular weight: 37021,01670 Da
isoelectric point:4,96156
aromaticity:0,06607
hydropathy:-0,47568

Domains

Domains [InterPro]
DC_0421
STR
3–333
DC_0421
G3DSA:1.20.5.170
STR
5–36
G3DSA:1.20.5.170 G3DSA:1.20.5.190 IPR030392 Coil
IPR030392
CHP
222–320
IPR030392
XKC24404.1
1 333
Architecture
STR
STR 3-333
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage HMD-P4
[NCBI] 		3374742 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC24404.1 [NCBI]
Genbank nucleotide accession
PQ462666.1 [NCBI]
CDS location
range 79200 -> 80201
strand -
CDS
ATGGTAACTAAAACAGTAATTCCTACGGATATTACAAAACTTAAAACTGATGTTCAATCAGTCACTAGTGATGTATCAACTTTAAAACAAGATACTACCACACTAAAATCTGATGTATCAACGTTAAAACAAGATACCTCCACGTTGAAGTCCGATGTATCAACTCTAAAATCCGATGTTGGTAACTTGAAAACACGGGAGATTGTGAATACTGACTGGACAGCGCAGCGACCACAGAATCAGCAGAACGATTCGTCTAGCAACTTTGGGACTGGTTATAAATTAATCTCTCAAGGTATAGATCTTGATGGAAAAACATATACTGCGTCACTGGAAATGGTGCGGGTTAGATCTGACGGAATCATAAACGCGCGTATTAATGTTGTTAACGCTGCTGGTAACTCAATATATTATGATTTTAATGATAATGGTGAAATTGTAATTCCACCGAGACAAAATATTGGCCCAAGACGTCTTCGTATTGCAAATGATGGCACGTCAACACTGGATGGACGTCTTAATATGTGGGGTGTTAGTACACGTCCCGACGTATTTGAATACGGCTGGAGTAATGGTTATGGCTTCTATATGCAGCGTAATACTGATGACTCCAAAGAGCTTCATGTAAACGGAAACATTACTTCATTTAATGTGAGTGCTGGCTCTGATCGTGATCTGAAAGAAAATATTCAAGTTATAGATAATGCTACTGACCGTCTAAGAAAAATGTATGGATACACCTATACACTTAAATGTGATGGTATGCCGTATGCTGGAGTAATTGCACAAGAAGCAATGGAAGCAATTCCTGAGGTAGTAGGGGGTATGACAGTTTACACTGAAGAAGATAAGGAAATAGGGACGCGTTATCTTACCGTTAACTATTCTGGTATTGTTGGATTGCTCGTTCAGGTATGTCGTGAAGCTGACGATCGCATTACTAAGCTCGAGACTGAAATAGAAGAGCTAAAAATATTAGTCAATAAACTAATATCACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
fea8210156cc8da589ef87307dfb4fa2f05bc39dee6ded0bb3f200cb56bc92f7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7324
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50