Protein

View in Explore
Genbank accession
AHC30460.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRFDVKAGLQSVKDELKAKVDYEAWQLRSQYITTIPGQDMVYMEKRLEAEIVVADPDLGENLSAAEIPHVAKEATTSGVSRFDKSVEILTLANLWKQVSPAIEDRRLSTKSAIDAAITVAEARALSVVDWSDLSLM
Physico‐chemical
properties
protein length:136 AA
molecular weight: 15067,01050 Da
isoelectric point:4,80474
aromaticity:0,05882
hydropathy:-0,12206

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage vB_RleS_L338C
[NCBI] 		1414737 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhizobium leguminosarum
[NCBI] 		384 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHC30460.1 [NCBI]
Genbank nucleotide accession
KF614509.1 [NCBI]
CDS location
range 36918 -> 37328
strand +
CDS
ATGCGGTTTGATGTCAAAGCTGGCTTGCAGTCCGTCAAGGACGAACTCAAGGCCAAGGTCGATTACGAAGCCTGGCAACTGCGCTCGCAGTACATCACCACCATCCCAGGGCAGGACATGGTCTACATGGAAAAGCGCCTGGAGGCAGAGATCGTCGTGGCCGACCCTGACCTCGGCGAGAACCTGTCCGCTGCCGAAATCCCGCACGTGGCCAAGGAGGCTACCACCTCCGGCGTCAGTCGCTTCGACAAGTCCGTGGAAATCCTGACGCTGGCGAACCTGTGGAAGCAGGTGTCTCCGGCTATCGAGGATCGCCGCCTGTCAACGAAGAGCGCCATCGACGCGGCAATTACCGTAGCGGAAGCTCGTGCTCTGAGTGTAGTGGACTGGTCCGACCTGTCCCTTATGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
307611de0db493db947b17cb37ad4bac196a9f9b471dc8d3e44bf04ddebd51fc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of Rhizobium leguminosarum phages from western Canadian soils and complete genome sequence of rhizobiophage vB_RleS-L338C Restrepo-Cordoba,M., Halmillawewa,A.P., Hynes,M.F. and Yost,C.K. 2015-09-16 — GenBank