Protein

View in Explore
Genbank accession
GENB_8beff11bc82d [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 0,98
Protein sequence
LKSSKIIIASLVSLTLVSNPILTFAATNDVIDSTTEITTDKEISSTQPTIKTTLKAGQTQSFNDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHNSSIADMTGIEKLTGLTKLICTYNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLTYLNCDTNKLTKIDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITALDVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLTEIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTKLDVSHNTKLKSLSCVNAHIQDFSSVGKIPVLNNNLDAEGQTITMPKETLTNNSLTIAVSPDLLDQFGNPMNIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVGTVTTPFEAPQPIKGEDVTVHYLDDKGEKLAADEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGTFTTTSQSVTYVYTKNIVAAEPVTVNYVDDTGKTLAPSETLNGNVGDTYNATAKQIDGY
Physico‐chemical
properties
protein length:618 AA
molecular weight: 67679,85870 Da
isoelectric point:4,35008
aromaticity:0,05663
hydropathy:-0,25388

Domains

Domains [InterPro]
IPR032675
STR
60–422
IPR032675 IPR054717 G3DSA:3.10.20.320 G3DSA:3.10.20.320
GENB_8beff11bc82d
1 618
Architecture
STR
RBD
STR 60-505 | RBD 506-618
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage LM 4-11-1
[NCBI] 		3113835 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
OR846853.1_CDS_[10995..12848] [NCBI]
Genbank nucleotide accession
OR846853.1 [NCBI]
CDS location
range 10995 -> 12848
strand +
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
d05b1da0a4fc49abede6bc8bc515e9230a191414e3d99d4b69fee0e85761d3e4

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,9162
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50