Protein

View in Explore
Genbank accession
YP_009188565.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTLYMGPNTGLLINGLPGEGHYNDLIRMWRWDDFLRQPVVKGRVATLPTTGQAEGDTYIFTGSGSNQNRLARWWATGATTPIWEYMPPRLGWRVQVANETTPAGQVKTYEYSGSAWTELVGGMADAPSDGKRYARLNNAWAGLGAAAVADILGTVSQAGGMPTGAIYEGGSNANGSYVRLADGTQICSSSLLTFTAEASSVGARWTFPANFVSPSMMFGSVVASGAGADYDPGIAARNQGTVYFNSSTNYANLGFLCISSASFTPGAQTRNNRAIAIGRWF
Physico‐chemical
properties
protein length:281 AA
molecular weight: 29875,02060 Da
isoelectric point:7,72723
aromaticity:0,11388
hydropathy:-0,15872

Domains

Domains [InterPro]
DC_0857
STR
40–281
DC_0857
G3DSA:1.20.5.320
STR
98–146
G3DSA:1.20.5.320
YP_009188565.1
1 281
Architecture
STR
STR 40-281
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeS_PM105
[NCBI] 		1743016 Uroviricota > Caudoviricetes > Guarnerosvirinae > Mechnikovvirus PM105 > Beetrevirus PM105
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009188565.1 [NCBI]
Genbank nucleotide accession
NC_028667.1 [NCBI]
CDS location
range 37833 -> 38678
strand +
CDS
ATGACTCTTTATATGGGACCGAATACCGGCCTGCTGATCAATGGCTTGCCGGGAGAAGGGCATTACAACGATCTGATTCGGATGTGGCGCTGGGATGACTTCCTGCGCCAGCCCGTGGTCAAGGGGCGCGTCGCCACACTGCCCACAACCGGCCAGGCCGAGGGGGACACGTACATTTTCACTGGCTCCGGCTCCAATCAGAACCGCCTAGCGCGCTGGTGGGCAACGGGTGCGACAACGCCCATTTGGGAGTACATGCCGCCACGGCTGGGCTGGCGAGTTCAGGTTGCGAACGAGACAACCCCGGCAGGCCAGGTCAAGACATACGAGTATTCCGGCAGCGCCTGGACTGAGCTGGTGGGCGGAATGGCCGACGCGCCGAGCGACGGGAAGCGCTACGCCAGGCTGAACAACGCGTGGGCAGGCTTGGGGGCTGCTGCCGTCGCCGATATTCTCGGGACGGTCTCTCAGGCCGGCGGTATGCCAACTGGTGCAATCTACGAGGGCGGCAGTAACGCGAACGGAAGTTACGTCAGGCTCGCAGACGGAACGCAAATTTGCTCCAGCAGCCTTTTAACGTTTACTGCGGAAGCGAGTTCTGTTGGTGCCAGGTGGACGTTCCCGGCCAACTTTGTGTCGCCGTCAATGATGTTTGGCTCAGTTGTCGCATCGGGGGCCGGAGCGGATTACGACCCTGGCATCGCTGCCAGGAACCAGGGGACTGTCTATTTCAATTCCTCAACCAACTATGCAAACCTGGGGTTTCTTTGCATCTCGTCTGCATCGTTCACCCCTGGCGCCCAAACTCGAAACAACCGTGCTATCGCCATTGGGAGGTGGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5188c6e2e3adef890d94bc4aafb89ce3f073be6b42a61221a5abed5af78d19c1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7661
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of PM105, a New Pseudomonas aeruginosa B3-Like Transposable Phage Pourcel,C., Midoux,C., Bourkaltseva,M., Pleteneva,E. and Krylov,V. 2016 26941153 GenBank