Protein

View in Explore
Genbank accession
QQO38505.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MANKLIEELIIKVKQQGAKPTEKAIKGVGDALTEAKTANNAFNASLERSPKMFKKVEEAANRAAKSTSKINFGFDSNAIQRSLDDVVDTLHSMLSEIQDVDTTIGKMNNNMIHSFDNLANSLGADLERVEDGLIDVRQQAGKTNDALVGVGKGAKKAGRGMGNQNRQGRNQARTFADIAKFAGPLPLLYANIAANVFALSEAFRLLTEGEQLNRLEDVGTIIGSKIGVPVQLIGREMQKLTGYTLSYGDSLRNAAAAASYGFDATQIEQLTMAARRASIALGVDMQDAMNRVIRGTSKLEIELLDELGITTKLTTAYENYAQKLGISATALNSYQQRAALVNEINSQSVEKFGDLDEMLRNGAPWETFGANVATAFQGLLQELAEATSAIPKFFNTIEERSRNIREPIEVSKQLLDSFIESTERGGKVGILVRTGEEITKLESKLKSLRSVDTSSLSIAEAASLRQELKNVEQGIKNLQNIQKQDTLGIPNIKNADLAYRNLTATVKGSVQSYNTSLAAIRGQAAAYEKLYSDVHSMAQAYRELKKTDPGAKTAEALDRLGFSSETALLNAERLAKRYRDTNRELAVFAKTQAEAEIQGRWSGKDPNAVKLTILKQQRELYTALLVDQRRLGANATEQAKTEAEIAKISQQELNTEIALVNEKNKRLNTQTQLNMAGQPELLIKKDLLTNERARLANLQLIRGTHLEQEQSLNRIKQLENEILATQTAQSNQMMESALGNLASFAPGIDQMTSSLNGLAMSFNNMGQSSMTATQMVSSGLTAFQGMLSYTSNQAIGAIDQQIAAEQKRDGKSKESVAKIAALEKKKVEQQKKVAKQQILISTAVAVMNAAANPWPVPAIPLMASAALAGGLAYQQASSASANLVSGAAGDTKASLTLGDRSNQVDVSQSATRGELSYIRNEGGTGSLQSFTPRANGGIGTPGNSIVVGEDGPEVITPLEPVRAYSAEESAAGGKGGYTDNRQLIVQALDTQSIMDRADDIFNAWDDAAYQRGYNKEKLY
Physico‐chemical
properties
protein length:1019 AA
molecular weight: 110197,02790 Da
isoelectric point:6,62682
aromaticity:0,04809
hydropathy:-0,38165

Domains

Domains [InterPro]
IPR056207
TAS
1–81
IPR056207 DC_0073 DC_0073 Coil
Coil
Unmapped
461–484
Coil Coil DC_0073
Coil
Unmapped
701–728
Coil
QQO38505.1
1 1019
Architecture
TAS
STR
STR
TAS 1-80 | STR 81-413 | STR 431-987 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPG01
[NCBI] 		2798882 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO38505.1 [NCBI]
Genbank nucleotide accession
MW398869.1 [NCBI]
CDS location
range 99465 -> 102524
strand -
CDS
ATGGCTAATAAGCTAATAGAAGAACTAATCATCAAGGTGAAGCAGCAAGGTGCTAAACCTACAGAAAAAGCTATTAAGGGTGTCGGTGACGCCCTTACTGAAGCAAAAACTGCTAATAATGCTTTTAATGCTTCACTTGAACGTTCTCCAAAGATGTTCAAAAAAGTAGAAGAGGCGGCTAACAGAGCAGCTAAATCTACTAGTAAGATAAACTTTGGTTTTGATTCTAACGCCATACAACGTTCATTGGACGACGTAGTAGATACATTGCATTCTATGTTATCAGAGATACAGGATGTAGACACTACTATTGGTAAGATGAACAATAATATGATACACTCTTTCGATAATCTAGCTAACAGCCTAGGTGCTGACTTAGAGAGAGTAGAAGATGGTCTTATAGACGTACGTCAACAGGCAGGTAAAACTAACGATGCGTTAGTGGGTGTAGGTAAGGGAGCTAAAAAAGCTGGACGTGGTATGGGTAACCAGAACCGCCAAGGTAGAAACCAAGCACGTACCTTTGCAGATATAGCTAAGTTTGCTGGCCCACTCCCACTACTATATGCTAATATTGCTGCTAACGTATTCGCACTCAGCGAAGCTTTTCGTTTATTGACTGAGGGTGAGCAACTTAACCGTCTAGAAGATGTAGGTACAATAATAGGGTCTAAAATAGGCGTTCCTGTCCAACTAATTGGTAGAGAGATGCAAAAGTTAACTGGATATACTCTTAGTTATGGGGACTCTCTTAGAAACGCAGCTGCGGCTGCTTCATATGGCTTTGACGCTACCCAGATAGAACAATTAACCATGGCTGCTCGCCGCGCATCTATAGCACTAGGCGTGGATATGCAGGATGCAATGAACCGTGTAATTCGCGGTACATCAAAGCTAGAAATCGAATTATTAGACGAACTGGGGATCACAACCAAGCTTACAACAGCATATGAGAACTATGCCCAGAAATTGGGTATCAGTGCAACTGCTCTCAACTCCTACCAACAAAGAGCCGCATTAGTTAATGAAATCAACTCTCAGTCTGTGGAGAAGTTTGGTGACTTAGATGAGATGCTAAGGAATGGTGCTCCTTGGGAAACTTTTGGTGCAAACGTAGCTACGGCGTTTCAGGGCTTACTACAAGAACTTGCTGAAGCCACATCTGCTATACCTAAGTTTTTCAATACAATTGAGGAACGTAGTAGAAATATTAGAGAACCTATAGAAGTATCTAAGCAGTTATTAGACTCCTTTATAGAATCAACTGAGCGCGGAGGTAAAGTAGGTATCTTGGTTCGTACTGGAGAGGAGATAACAAAGCTAGAGAGTAAGCTTAAAAGTTTGCGCTCAGTGGACACTTCGTCACTCAGTATTGCTGAGGCTGCGTCCTTGAGACAGGAGTTAAAGAATGTAGAACAAGGTATAAAGAACCTTCAAAATATTCAAAAACAAGACACCCTTGGTATACCTAATATTAAAAATGCAGACCTTGCATATAGGAACCTGACTGCTACCGTAAAAGGCTCCGTGCAGTCATATAACACTAGTTTAGCAGCTATAAGGGGTCAGGCAGCGGCGTATGAAAAATTATATAGTGATGTTCACTCTATGGCTCAGGCCTATAGGGAGCTAAAGAAAACCGATCCAGGAGCTAAAACTGCCGAGGCATTAGATAGGTTAGGGTTTTCATCAGAAACAGCACTTCTAAACGCCGAAAGACTAGCAAAAAGATACAGGGATACTAATAGAGAGTTGGCTGTCTTTGCAAAAACCCAAGCAGAGGCTGAAATTCAAGGACGCTGGTCTGGTAAAGACCCTAATGCAGTAAAACTTACTATTTTAAAACAGCAACGTGAGTTATACACTGCCCTACTAGTAGATCAGAGAAGACTTGGGGCTAATGCTACTGAGCAAGCGAAGACAGAAGCTGAAATAGCAAAAATATCTCAACAAGAGTTAAATACTGAAATAGCACTTGTTAACGAGAAAAATAAGCGTCTTAATACGCAGACCCAACTAAATATGGCGGGTCAGCCAGAACTTCTTATTAAGAAGGATTTACTAACTAATGAGAGAGCTAGATTAGCTAATTTACAGCTAATTAGAGGCACTCACTTAGAACAAGAACAGTCCCTTAATAGAATAAAGCAACTAGAAAATGAGATACTAGCTACTCAAACAGCTCAATCAAATCAAATGATGGAGTCTGCTTTAGGTAATCTAGCATCTTTTGCTCCTGGTATTGATCAAATGACAAGCTCATTGAATGGGCTAGCAATGTCGTTTAACAATATGGGTCAGTCTAGTATGACTGCTACCCAAATGGTATCTTCCGGACTAACTGCCTTCCAAGGGATGCTATCTTATACGTCAAACCAAGCTATAGGAGCTATAGATCAACAAATAGCTGCTGAGCAAAAACGTGACGGTAAGTCTAAAGAGTCTGTAGCTAAAATAGCAGCTCTTGAGAAGAAGAAAGTAGAACAACAGAAGAAAGTAGCTAAACAACAAATCCTTATCTCTACTGCGGTAGCGGTAATGAATGCGGCTGCTAACCCTTGGCCTGTTCCAGCTATCCCGTTAATGGCTTCAGCAGCATTAGCAGGTGGTTTAGCATACCAACAAGCATCTAGTGCAAGTGCTAACTTAGTTTCTGGGGCTGCAGGAGATACTAAGGCTTCACTAACTCTTGGTGATAGGTCTAATCAGGTGGATGTGTCTCAATCAGCTACTCGTGGCGAACTTTCTTACATAAGAAATGAAGGAGGTACAGGCAGCTTACAATCATTTACTCCTAGAGCAAATGGTGGTATAGGTACTCCGGGCAACAGTATTGTAGTAGGTGAAGATGGGCCAGAGGTAATCACACCCCTAGAGCCAGTAAGAGCATACAGTGCCGAGGAATCAGCTGCGGGAGGTAAAGGCGGATATACTGACAACCGTCAACTAATAGTACAAGCATTAGATACCCAATCTATTATGGATAGGGCTGATGATATTTTCAATGCTTGGGACGATGCGGCCTACCAGCGTGGTTATAATAAAGAGAAATTATATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
744cedaa8d687d68e52edfc0544e4d91e811d56a6d14f936384b6fac7dd803f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6368
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio parahaemolyticus Bacteriophage VPG01 Kim,B.S. and Kim,M. 2012-06-15 — GenBank