Protein

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Genbank accession
AUR85182.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAIHKDLGDAELHEPKGMLPLVAGAADIGKVVVSKGDGTSEARFLLPAEVDAMAKGTRVVIVDSKDDFPVPAAGTITLADDTTYFVTNSILLGTDTLTMGNLTSVAGIGQYAARINYTGTGAMFNSTQTHYIDGLILEAPNGKFFAHNDSAFSFINYNNLILSDNSGIGTFTSTSNSALFVESVFNDAAAPIAGAGFVMTGNWELFQCTAMQMVQVSGITLDFGSATFNSIGLQGTAIIIASPAATAISGLANSGNLTANSLGKVTNCLIRNPGGGTVISGIVSTDFRWRFLNSTLLEDTRPDALIFMNGNAAATPISGGSGDAGNPIKAIGTFSNERLSHFSFDASGRCTYIGEDPITLPIDISVSAMSVTGTPDAKFYIALNGTAILGSQSFLELQTDPNTTQCIWQITFTQNDYIELFLSNESNTTDITVDTAVLRIN
Physico‐chemical
properties
protein length:441 AA
molecular weight: 46238,40190 Da
isoelectric point:4,37771
aromaticity:0,08163
hydropathy:0,17460

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR85182.1
1 441
Domain Start End Length (AA) Confidence
N-terminal 1 80 80 0,8876
Central domain 81 298 219 0,9652
C-terminal 299 441 142 0,9896
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-80
Central
81-298
C-terminal
299-441

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.070.O._10N.261.45.B2
[NCBI] 		2070719 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterovibrio norvegicus
[NCBI] 		188144 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR85182.1 [NCBI]
Genbank nucleotide accession
MG592447.1 [NCBI]
CDS location
range 11147 -> 12472
strand +
CDS
ATGGCAATTCATAAAGACTTAGGTGATGCAGAACTGCATGAACCAAAAGGTATGCTACCCCTCGTAGCAGGTGCAGCTGACATCGGTAAGGTGGTCGTCTCTAAAGGTGATGGCACAAGTGAAGCTCGCTTCCTGCTACCAGCAGAAGTAGACGCTATGGCTAAGGGTACACGTGTTGTAATCGTAGATAGCAAAGATGACTTCCCTGTCCCGGCAGCAGGTACAATCACACTGGCTGATGACACGACCTACTTTGTAACAAACAGCATCCTGTTAGGTACTGATACCTTAACGATGGGTAACCTGACATCCGTTGCAGGCATTGGTCAGTATGCTGCCCGTATCAATTACACTGGTACTGGCGCTATGTTCAACTCAACCCAGACACACTACATTGATGGGCTTATCCTTGAGGCACCGAACGGTAAGTTCTTTGCTCACAATGACTCTGCCTTCTCATTCATTAACTACAACAACCTCATCCTAAGTGACAACTCAGGCATCGGTACATTCACCAGTACAAGCAATAGTGCGCTATTTGTTGAGAGCGTATTCAACGACGCTGCCGCCCCTATCGCGGGTGCAGGTTTTGTGATGACAGGTAACTGGGAACTGTTCCAGTGTACTGCTATGCAGATGGTACAGGTGTCAGGTATCACCCTAGACTTTGGCTCTGCCACGTTTAACTCTATCGGGTTACAGGGTACAGCTATCATCATTGCTTCTCCCGCAGCTACAGCTATTAGTGGCTTGGCCAACTCAGGTAACTTGACGGCGAACTCGCTGGGTAAAGTAACCAACTGCCTTATCCGTAATCCGGGCGGCGGTACGGTTATCAGTGGTATTGTCTCTACTGACTTCCGCTGGCGCTTCCTCAACTCCACGTTGCTGGAAGATACACGACCTGACGCACTCATCTTCATGAATGGTAATGCAGCAGCTACGCCTATCAGTGGCGGTAGTGGTGACGCAGGTAACCCTATCAAGGCTATCGGTACGTTCAGCAATGAGCGCCTATCACACTTTAGCTTCGACGCGTCAGGACGCTGTACTTACATCGGTGAAGACCCTATCACTCTGCCTATCGACATCTCGGTTAGTGCTATGTCGGTCACTGGTACGCCTGATGCTAAGTTCTATATCGCACTGAATGGTACTGCTATCTTAGGTTCACAGAGCTTCCTTGAGTTGCAGACTGACCCTAACACTACGCAATGTATCTGGCAGATTACTTTCACGCAGAACGATTACATCGAACTGTTCCTGAGTAACGAGTCAAACACAACTGACATCACTGTAGATACAGCGGTACTTCGCATTAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f9c9e8fb70f493b2b0956ddd989d4cc7d9395254ac928a6548b1aaec54d86468
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7173
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank