Protein

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Genbank accession
WGM49817.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFARMVKYGNIKPAPSANVIKMQAPSAFTNNTLMLQYSNGDLWGIGGNNAGIFGLGNTTTQTSWVRLMQNVKNFWCTRNSSYSLVQTNDNKFYYAGWNTWTGASSEVQSTTFVECTSYFSGINIDDIKEIYPNVRNLFVLTNSGVLYAIGNNSTYELGSSSSMLTELTQVNINVKKVSSFFNSPTWIIKNDNSAWRCGTTTTGTLLTGAASATLTSWTRYDFGTGKYPIDILSHNKMLGIVLYSDGTYPLYGLGSQFYGQLGNGVTTNTNKTALTPQSTYLQLTNVSDFEFIDLHSQSTRGILYRNGSRIFSTGYNNYGQLGNNSTTNASVFVQSQLPISVVFDPETSMVAANDNALFVYAGGKLYYTGMSPNGTVTGTWTLTEYQLPQF
Physico‐chemical
properties
protein length:392 AA
molecular weight: 43100,66200 Da
isoelectric point:8,24281
aromaticity:0,13010
hydropathy:-0,20765

Domains

Domains [InterPro]
DC_0433
ATT
1–129
DC_0433 IPR009091
IPR009091
STR
15–221
IPR009091
IPR009091
STR
32–270
IPR009091
IPR051553
Unmapped
34–273
IPR051553
DC_0436
RBD
103–239
DC_0436
WGM49817.1
1 392
Architecture
ATT
STR
ATT 1-129 | STR 130-389 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGM49817.1
1 392
Domain Start End Length (AA) Confidence
N-terminal 1 194 194 0,0874
Central domain 195 381 188 0,6406
C-terminal 382 392 10 0,9426
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-194
Central
195-381
C-terminal
382-392

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Ec-M-J
[NCBI] 		3038267 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGM49817.1 [NCBI]
Genbank nucleotide accession
OQ718158 [NCBI]
CDS location
range 338690 -> 339868
strand -
CDS
ATGTTACCTTTTGCAAGAATGGTTAAGTACGGGAATATTAAACCTGCACCATCAGCTAATGTAATTAAAATGCAAGCACCATCAGCGTTCACCAACAATACATTGATGCTACAGTATAGTAACGGTGATTTGTGGGGTATCGGTGGAAACAATGCTGGTATTTTCGGACTGGGTAATACTACAACACAGACATCATGGGTTCGATTAATGCAAAATGTGAAAAATTTCTGGTGCACTAGGAACTCTTCATATAGCTTAGTACAGACTAATGATAATAAATTTTATTATGCAGGATGGAACACCTGGACAGGTGCATCGAGTGAAGTACAAAGTACTACCTTTGTGGAATGTACTTCTTATTTTTCGGGTATTAATATTGATGATATTAAAGAGATATATCCTAATGTTCGTAATTTGTTTGTACTAACAAATAGTGGGGTTCTTTATGCAATAGGTAATAACTCCACATATGAGTTGGGTTCAAGTTCATCAATGCTTACAGAATTAACCCAGGTCAATATTAATGTTAAAAAGGTTAGTTCATTTTTTAATAGTCCAACTTGGATAATTAAGAATGATAATTCAGCGTGGCGATGTGGCACAACTACCACTGGTACTTTGTTAACTGGGGCAGCGTCGGCTACATTAACGTCTTGGACTAGATACGACTTTGGTACAGGGAAATATCCAATAGATATTCTTTCACATAATAAGATGTTGGGTATAGTTCTTTATTCAGATGGTACTTATCCGCTATATGGTTTAGGATCACAATTTTACGGTCAATTAGGTAATGGAGTTACAACCAATACGAATAAGACAGCACTAACTCCACAAAGTACTTATTTGCAATTAACTAATGTTTCCGATTTTGAATTTATAGATCTACATTCACAAAGTACTAGGGGTATATTATATAGAAATGGTAGCCGTATTTTCAGTACTGGGTATAACAACTATGGACAACTTGGTAACAATTCAACTACCAATGCGTCAGTATTTGTTCAATCACAATTACCAATTTCTGTAGTATTTGATCCAGAAACTTCGATGGTTGCTGCTAATGACAATGCATTATTTGTATACGCTGGTGGCAAATTATACTACACAGGGATGTCCCCGAATGGAACAGTTACAGGTACATGGACATTAACTGAATACCAACTACCACAATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d59547ff695d5acd39fb36fb8e8d7709c696a2f752f2938fdbe1c7657634d0c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8795
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel E. coli Jumbo phage vB_Ec-M-J Kusradze,I., Rigvava,S., Karumidze,N., Goderdzishvili,M., Lossouarn,J. and Petit,M.A. 2016-10-04 — GenBank