Protein

View in Explore
Genbank accession
WWO60454.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
Protein sequence
MANLPSNIIPVSDLPELPSGSFDSIVGVNESASQAVKFRINELPVSNATKEQIDNLVAGQQTSSIYANTLSDLQSVTGSFNGQGGFVVNGQGSGQYRWNGSSWEFLREDILANKADKQELKEVAGGIQFLGNSSPAPGSGASSNANFILSSTPARNGKLNSLSLNARIAGTVNVGVYRAVNGPPAVPGSALIRVATIPLSVAMGSNSIDLSSQAVNVQSGDLIGLSGNGIVSYTTTPAGGPRYYSVSGQTPTLGNLINDNRWEFGIGVEFSYSTETPIGEELSSVTEEVRSPVSGLDTKASKDDVDKALGSNLQRIANNSPQVGTPYASGATIVCTTPVNVSDKITKLKIGSAIASSGSLVVYRPPQGVAPAPGVTVTRILVHPIQLVAGVNIITGNALPDLVLLPGDIIGISANGALTYTTVSAGGPRYYQVSGATATLGNPINDNRWEWGVEVGIEFSNENPLFPAVIDYVNQKTADVQSWEPTNSFILVVINGQSLAAGRALNPSKFNIPEGRSYKWNPTDGIVTLTDPTGTDTTALTGRSSIGPAIANAVLVATNGKVGVIIINTAIGSTTVNNWRTGGSAWNATIPKWDSAIADIISKKLNVIGTAGVVLLGETDANNGTSANTYRSGLLDLRNNMRLKLGIPNMPLIMSQLGINTDDPTSQSWNAIRSVQSELARNGEIILAYRRAKYFGELGWMIDNLHPNEIANDEVGGALGQSILAYALGTAPIEFDS
Physico‐chemical
properties
protein length:737 AA
molecular weight: 77010,33990 Da
isoelectric point:4,95269
aromaticity:0,06106
hydropathy:-0,05047

Domains

Domains [InterPro]
IPR036514
STR
485–730
IPR036514
IPR052940
Unmapped
487–725
IPR052940
IPR005181
ENZ
491–723
IPR005181
IPR036514
STR
491–730
IPR036514
SSF52266
STR
492–731
SSF52266
WWO60454.1
1 737
Architecture
STR
STR 485-731 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SOVA965
[NCBI] 		3117470 No lineage information
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWO60454.1 [NCBI]
Genbank nucleotide accession
PP079418.1 [NCBI]
CDS location
range 20052 -> 22265
strand +
CDS
ATGGCTAACTTGCCATCAAATATAATCCCTGTTTCTGATTTGCCAGAGCTGCCTTCTGGCAGTTTTGATAGCATAGTGGGTGTTAATGAATCAGCAAGTCAGGCTGTAAAATTTAGAATTAATGAACTCCCAGTATCAAATGCAACTAAAGAGCAGATTGATAATCTTGTTGCTGGGCAGCAGACAAGTTCTATTTATGCAAATACACTCTCTGACCTTCAATCAGTCACAGGTTCATTTAATGGGCAAGGCGGATTCGTTGTAAATGGGCAAGGCTCCGGACAGTACAGATGGAATGGATCTTCATGGGAGTTCCTTCGCGAAGACATTTTGGCTAATAAAGCAGATAAGCAGGAATTGAAAGAGGTTGCTGGGGGAATTCAATTTCTTGGAAATTCATCACCCGCACCTGGAAGTGGTGCATCTAGCAATGCAAACTTCATACTTTCATCCACTCCAGCAAGAAATGGAAAGCTTAACTCGCTATCTTTGAATGCAAGGATTGCAGGAACTGTAAACGTTGGTGTTTATAGGGCCGTTAATGGACCTCCTGCTGTACCTGGAAGCGCTCTAATCCGAGTTGCAACAATTCCCTTGAGTGTAGCAATGGGTTCTAATTCAATAGACCTATCTTCTCAAGCTGTAAATGTTCAGTCAGGAGATTTGATTGGACTGTCTGGCAATGGAATAGTTAGCTATACAACTACTCCAGCCGGAGGGCCGCGCTATTACTCCGTCTCTGGACAGACTCCAACACTTGGAAATCTTATAAACGATAATAGATGGGAATTTGGAATCGGTGTGGAATTTTCATATTCTACTGAAACTCCAATTGGAGAAGAGCTTTCCTCAGTTACTGAAGAGGTTAGAAGTCCTGTAAGTGGGCTGGACACAAAGGCTAGTAAAGATGATGTAGATAAAGCCCTTGGCAGTAACCTTCAGAGAATTGCGAATAATTCTCCGCAAGTTGGAACTCCATATGCATCTGGCGCAACAATTGTATGCACTACTCCTGTTAATGTCTCTGATAAAATAACTAAGCTCAAGATCGGATCGGCTATTGCATCAAGTGGAAGTTTGGTTGTTTACAGGCCTCCTCAGGGAGTTGCTCCAGCCCCAGGAGTAACTGTCACCAGAATTTTGGTTCACCCTATTCAGTTGGTTGCAGGCGTCAATATCATTACTGGCAATGCTCTACCCGACCTCGTATTGTTGCCAGGGGATATTATCGGAATTTCTGCAAACGGAGCGCTGACATATACGACAGTAAGCGCAGGCGGCCCTCGTTATTATCAGGTCAGTGGTGCAACTGCAACATTGGGAAACCCCATTAATGACAACCGGTGGGAATGGGGTGTAGAGGTGGGTATTGAATTTTCAAATGAGAATCCACTATTCCCGGCTGTAATTGATTATGTAAATCAAAAAACTGCTGACGTTCAGTCCTGGGAACCTACTAATTCATTTATTTTGGTTGTTATTAATGGTCAATCCTTGGCTGCTGGGCGCGCTCTAAACCCTAGTAAATTTAATATCCCTGAGGGTAGATCATATAAGTGGAATCCAACTGACGGAATCGTAACTCTTACTGATCCAACAGGAACTGATACTACTGCACTAACAGGAAGAAGTAGTATTGGACCAGCCATAGCTAATGCTGTGCTTGTCGCCACTAACGGTAAAGTTGGCGTAATCATCATTAACACGGCTATTGGAAGCACTACAGTAAATAATTGGCGCACTGGAGGAAGCGCATGGAATGCAACTATTCCTAAATGGGATTCCGCAATAGCCGATATAATTTCAAAAAAGCTAAATGTTATTGGAACTGCTGGCGTAGTTCTTCTTGGCGAAACTGATGCCAATAATGGAACATCTGCCAATACATATAGATCAGGCTTGCTTGATCTTAGGAATAACATGCGCCTAAAGCTAGGCATACCTAATATGCCTTTAATTATGAGCCAGCTTGGGATAAACACTGATGACCCCACTAGCCAAAGCTGGAATGCAATTCGATCAGTTCAGTCTGAGCTAGCTAGAAATGGCGAAATAATCCTAGCGTACCGGCGTGCTAAGTATTTTGGCGAATTGGGTTGGATGATTGACAATCTTCATCCAAACGAAATCGCCAACGATGAAGTTGGCGGTGCTCTTGGTCAGTCTATCTTGGCTTATGCTTTAGGTACTGCACCTATTGAATTTGATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
da2e35732edd3db3463cb3e6a2cdc6cfb6a3aad3d80e9129a4f6bd50e8883105
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7733
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank