Protein

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Genbank accession
YP_009792824.1 [GenBank]
Protein name
head closure Hc3
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGAYAQRGQVVNLPIVFGDGRSRTDFDWITRLPENMLAIARQIKGGNGYMRMMPGLKKVADVAGLSRGSDWNTVSNSAYRVMGGKLYNAGVEVGDVNGEDRTPMAHSRDSQGVVTGNQLLLYRYDGTRKTFSNWPLDSGTGVNNPQFTWGDINDVCHLRQRYIFSVKNSDTFWISSLEDESHPDKIAPFYRAESMPDGIVAIRAWRDYVICFGTASIEFFGLTGDAQNVYANQPSYTVEAGTLGRETVCQYLNSFAFLTSPFVGEYTIALMNPGGGDWSDLASVQVKKILAGYTVAQLQQTRLEAISFESHKLLIVHLPDQTLVYDHPVSQAQGLPVWTIIKTGVQNASGPHRAIDYVNEGNRVTVGDKTLAVMGAFDMTTCAQYGADQEIVLYTPLMPFTGMMLSDFEIDASVGGDSVTSRMWISATEDGSVFGQEILIDYNTPQQWLKRVILHKVGRCRTVIGFKIRTVGATPATLSRARVRVS
Physico‐chemical
properties
protein length:486 AA
molecular weight: 53604,09520 Da
isoelectric point:6,09640
aromaticity:0,09877
hydropathy:-0,17181

Domains

Domains [InterPro]
IPR021098
STR
12–485
IPR021098
YP_009792824.1
1 486
Architecture
STR
STR 12-485 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009792824.1
1 486
Domain Start End Length (AA) Confidence
N-terminal 1 95 95 0,6920
Central domain 96 294 200 0,0465
C-terminal 295 486 191 0,4443
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-95
Central
96-294
C-terminal
295-486

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnS_IME279
[NCBI] 		2041211 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009792824.1 [NCBI]
Genbank nucleotide accession
NC_047862 [NCBI]
CDS location
range 26155 -> 27615
strand -
CDS
ATGGGAGCTTATGCGCAACGCGGGCAGGTCGTTAACCTGCCGATCGTTTTCGGTGATGGCCGCAGCCGGACGGACTTCGACTGGATCACCCGGCTACCGGAGAACATGCTCGCCATTGCTCGCCAGATTAAGGGCGGTAACGGCTATATGCGCATGATGCCGGGGCTTAAGAAAGTCGCGGACGTGGCGGGCCTGTCCCGTGGCTCCGACTGGAACACGGTTTCGAACTCCGCTTATAGGGTAATGGGCGGCAAGCTGTATAACGCAGGCGTGGAGGTTGGCGACGTCAACGGCGAGGATCGTACTCCTATGGCCCATAGCCGCGATTCTCAGGGCGTCGTGACCGGAAACCAGCTCTTACTCTACCGCTACGACGGGACCCGCAAGACGTTTAGTAACTGGCCGCTGGACTCCGGGACTGGCGTTAACAACCCGCAATTCACCTGGGGCGACATTAACGATGTTTGCCACCTCCGCCAGCGCTACATTTTCAGCGTGAAAAATTCGGACACTTTCTGGATCTCCTCGCTGGAGGACGAGAGCCACCCGGACAAGATCGCGCCGTTCTATCGTGCGGAGTCCATGCCGGACGGCATCGTGGCGATCAGGGCGTGGCGCGATTACGTGATTTGTTTCGGGACCGCCTCGATCGAGTTTTTCGGCCTGACCGGGGACGCCCAGAACGTTTACGCGAATCAGCCCTCCTACACCGTCGAGGCCGGGACGCTGGGCCGTGAAACCGTATGCCAGTACCTGAACAGCTTCGCATTTCTTACGTCGCCTTTCGTGGGCGAGTACACGATCGCGCTGATGAACCCCGGCGGCGGCGACTGGTCTGATCTGGCCTCCGTGCAGGTTAAAAAGATTCTGGCCGGGTACACCGTGGCCCAGCTCCAACAAACGCGACTGGAGGCGATCAGCTTTGAAAGCCATAAATTGCTTATTGTCCACTTACCGGATCAAACGCTCGTTTACGATCACCCGGTTAGCCAGGCGCAGGGCCTCCCGGTCTGGACGATCATTAAAACGGGCGTACAAAATGCCAGCGGACCGCACCGCGCGATCGACTACGTTAACGAGGGGAACCGCGTAACGGTCGGGGACAAGACGCTGGCGGTCATGGGCGCGTTTGATATGACCACTTGCGCGCAGTACGGGGCAGACCAGGAGATCGTCCTCTATACGCCGCTGATGCCGTTTACGGGCATGATGTTAAGCGACTTCGAGATCGACGCCAGCGTGGGCGGCGACAGCGTAACGAGCCGGATGTGGATCAGTGCCACGGAGGACGGGAGCGTATTCGGACAGGAGATCCTGATCGACTACAACACGCCGCAGCAGTGGCTAAAACGCGTTATTTTGCACAAGGTCGGACGTTGCCGGACCGTGATTGGATTCAAGATCCGCACCGTAGGCGCTACGCCTGCCACGCTGTCCCGTGCGCGCGTCCGCGTAAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eb5ce17b559a8f915bb9df04acf7c281315c656d4a80aa797caf14c0da82ca7d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8449
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50