Protein

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Genbank accession
XZS41001.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,56
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MVAKSFRARSGLDAAGEKVINVGKADRNTLSDGVNVDFFNEFNGIQQYDPTRGYSQDMAIIYARRIWYAKQNIASPAGAFDESKWIATRNDPKWVYSNVTTPDGSIIESGSYIMADGRFTELLYLLPDNPTEGDVITFKDCGGLVGVNSILVKSNTRQIRLRTVQSAQYRLTHPYMIATFIYNGNVWRVAETLDNRDSEIVNATGTGSFQLQSGMTVFRNSATGKITLQLPKYANDGDVITTYDADKMNSINVAVLQIYPGSGHTISDGAITGVTSVTSQKSGFGMFIFDAQNSQWKVYDADNRVRLRRIYSDLNAVPNDYVFVTANPSGTIPNVTVTLPTDVADGDRVYVSLYMMGKNQNCTIKVKDGTTDKIRTNKNMMQFPQRKDYPPDDWFSVTSLAFNAASDYLPYIEFSYMKATKEWVVANYRPIVERVDATNRSRTGVIALAAQAEVNKNLEDNPNDETAITPMTLANKTATETRRGIARLATTAEVNKLSTDTYLDDVIVTPKKLNERTATETRRGLAEIATQAETNGSTDDITIVTPKKLHNRIASPTLTGILALVATGGAPNTNTDRAQAGTGVYDHSDYQKAVTPKTLREYKATQLQSGAVWLASETEVINGTVASANIPTVVTPEMLHKKTSTDGRIGLIEIATQTETNAGTDYTRAVTPKTLNDRAATETLTGIIAIATTAEVSAGTVTNKAIVPSKLKGYLDDTSHITVATADGLTQSGTIWTTVNIGIQSATETQRGTLRVATQSETNAGTLDTVFVTPKKLHAKKATESAEGIIQVATAAETTAGTVTNKAVSPKNLKNTIQVDTSWQATDLVRGTVKLSKGLGTWSGNDVAGSTLPDDGYAAVGVAVSPYELNLTLKHYLPIGAKAVDADKLDNLDSSQFIRRDVDQTVNGALTLTRTTTVQANIDSSADATFRVMNVNGDLNVGDGSSMGKLRLNGGSSNDWSIQASSASGRIAMISTGNTSTVHLSVYNDTRGVVANVKFQAPEIQAISKVTLGNDTVITAAGSVLSMGTNNKTTKILTSDAGNIVAEESANSYKVFTEKNAQTLLNPTYVRKAGDTMSGRLTVSNSSIIIAGQAAWSTLDAVTEASRGNWTAEITASEQYNLLPGYAVPVLEPDPINPEIMIVTRYTYVKAPGTLTQFGNGTAFTYQIWAPRPTSGTGVNALAQSFWIRQMNPITGKFDGWGRMYTSNNPPTAGEIGATSAVGTTVKNMTVTDWIKVGNVKIYPDPVTQTVKFEWVA
Physico‐chemical
properties
protein length:1257 AA
molecular weight: 135453,22010 Da
isoelectric point:6,27061
aromaticity:0,07080
hydropathy:-0,27645

Domains

Domains [InterPro]
DC_1946
ATT
1–200
DC_1946 DC_1209
IPR048391
ATT
1103–1205
IPR048391
XZS41001.1
1 1257
Architecture
ATT
STR
ATT
STR
ATT 1-200 | STR 347-1102 | ATT 1103-1205 | STR 1206-1243 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XZS41001.1
1 1257
Domain Start End Length (AA) Confidence
N-terminal 1 829 829 0,8107
Central domain 830 1028 200 0,2338
C-terminal 1029 1257 228 0,6605
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-829
Central
830-1028
C-terminal
1029-1257

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KleM_kp20
[NCBI] 		3234012 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella michiganensis
[NCBI] 		1134687 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XZS41001.1 [NCBI]
Genbank nucleotide accession
PP993148 [NCBI]
CDS location
range 159781 -> 163554
strand +
CDS
ATGGTAGCTAAATCATTCCGCGCACGAAGTGGCCTTGATGCTGCTGGTGAAAAAGTTATCAACGTTGGGAAGGCTGATCGTAATACGCTGAGTGACGGCGTTAACGTTGACTTTTTCAATGAATTTAACGGAATCCAGCAGTATGACCCGACCCGTGGCTATTCTCAAGACATGGCGATCATTTATGCGCGTCGTATCTGGTACGCAAAACAGAATATTGCTTCCCCTGCTGGGGCTTTCGACGAATCCAAATGGATCGCAACTCGTAATGACCCGAAATGGGTTTATAGTAACGTAACCACTCCAGACGGTAGCATTATTGAATCTGGTAGTTACATTATGGCTGATGGACGCTTTACTGAACTTCTGTACCTGCTGCCGGACAACCCGACAGAGGGCGACGTAATCACGTTTAAAGATTGCGGTGGTTTAGTAGGTGTGAACAGTATCCTTGTTAAGTCTAACACCCGTCAGATCCGTTTACGTACTGTACAATCGGCACAGTATCGACTGACCCACCCGTACATGATCGCAACGTTTATCTATAACGGTAACGTATGGCGTGTTGCTGAAACTCTGGATAACCGCGATTCTGAGATCGTAAACGCAACCGGAACAGGTTCATTCCAGTTACAATCTGGCATGACAGTTTTCCGTAACAGTGCTACAGGTAAAATCACTCTCCAGTTGCCGAAATATGCAAATGATGGTGATGTGATCACAACCTATGACGCTGATAAAATGAACTCTATCAACGTAGCCGTTTTGCAGATTTATCCAGGTAGTGGACACACTATTTCTGACGGCGCAATTACTGGTGTTACTTCTGTAACTAGCCAGAAATCCGGCTTTGGTATGTTCATCTTTGATGCACAGAATAGCCAATGGAAAGTATATGATGCTGATAACCGTGTTCGTCTGCGTCGTATCTATAGTGATTTAAACGCAGTTCCTAACGATTACGTTTTTGTTACTGCAAACCCTTCTGGGACTATACCAAACGTTACAGTTACCCTTCCAACTGATGTTGCTGATGGTGATCGCGTTTACGTATCCCTTTATATGATGGGTAAAAACCAGAACTGCACAATCAAAGTTAAAGATGGTACAACGGACAAGATCCGCACCAACAAAAATATGATGCAGTTCCCGCAGCGCAAAGACTATCCGCCTGATGATTGGTTTAGTGTAACTTCATTAGCATTTAATGCTGCTAGTGATTACCTCCCGTATATCGAGTTTTCTTACATGAAAGCTACGAAAGAATGGGTTGTTGCTAATTATCGTCCGATCGTTGAACGTGTTGACGCAACTAACAGATCGCGTACTGGTGTTATTGCTCTGGCTGCACAGGCAGAAGTAAACAAAAACTTGGAAGACAACCCGAACGACGAAACTGCTATTACTCCGATGACGTTAGCAAATAAAACTGCTACAGAAACCCGTCGTGGTATTGCACGGTTAGCAACAACTGCTGAGGTTAACAAACTTTCAACCGATACCTATCTGGATGATGTGATTGTTACCCCTAAGAAGCTGAACGAAAGAACAGCGACTGAAACCCGTCGTGGATTGGCAGAAATCGCAACTCAGGCAGAAACAAACGGAAGCACCGATGATATTACGATTGTAACCCCGAAAAAGTTGCATAACCGTATTGCATCGCCGACCTTAACTGGTATCCTTGCCCTTGTTGCTACAGGTGGTGCTCCTAACACCAACACGGATCGTGCTCAGGCTGGTACTGGGGTTTATGATCATTCAGATTATCAGAAAGCGGTAACGCCTAAAACTCTTCGTGAGTATAAAGCGACTCAGTTACAATCTGGCGCTGTATGGCTGGCTTCTGAAACCGAAGTTATTAATGGTACTGTTGCAAGTGCAAACATCCCGACCGTAGTTACTCCGGAAATGCTGCACAAGAAAACCTCTACTGATGGTCGTATTGGTTTGATCGAGATTGCAACTCAGACAGAAACAAACGCTGGTACTGATTACACGCGAGCGGTAACGCCTAAAACGCTTAACGATCGTGCTGCAACGGAAACGCTGACAGGTATCATTGCAATTGCAACCACTGCCGAAGTATCAGCGGGTACTGTAACTAATAAAGCGATCGTACCGTCTAAACTGAAAGGTTATCTGGACGATACAAGCCATATTACTGTTGCTACTGCTGACGGGTTAACTCAATCTGGGACTATCTGGACTACGGTTAACATCGGTATTCAATCAGCAACTGAAACTCAACGTGGTACTTTACGCGTTGCTACGCAGTCTGAGACGAACGCAGGGACATTAGATACAGTATTTGTTACCCCTAAGAAGTTACACGCTAAGAAAGCGACTGAGAGCGCAGAAGGTATCATTCAGGTGGCTACGGCTGCTGAAACTACTGCTGGCACCGTCACAAACAAGGCTGTTTCTCCTAAGAACTTGAAAAATACAATTCAGGTTGATACTTCATGGCAAGCTACCGATCTGGTACGCGGTACTGTGAAACTGTCTAAGGGGCTTGGTACTTGGTCTGGTAATGATGTGGCTGGTTCTACTCTTCCGGATGATGGTTATGCCGCTGTAGGTGTTGCTGTTTCTCCTTATGAATTGAACCTGACGCTGAAACATTATCTGCCGATCGGGGCTAAAGCGGTTGATGCTGATAAACTGGATAACCTGGATTCTTCCCAGTTCATTCGTCGTGATGTTGATCAGACGGTCAACGGGGCGTTGACTCTAACGAGAACAACCACTGTACAGGCCAACATTGATTCAAGCGCTGATGCAACATTCCGCGTAATGAATGTTAATGGAGATCTGAACGTTGGTGATGGTTCGTCAATGGGTAAACTTCGTTTGAATGGTGGTTCATCTAACGACTGGTCAATTCAAGCAAGTTCAGCCTCTGGGCGTATTGCAATGATCTCGACGGGTAACACTAGCACAGTTCATCTTTCTGTGTATAATGATACTCGTGGCGTTGTAGCTAACGTTAAATTCCAGGCTCCTGAAATTCAGGCGATTAGCAAAGTGACTCTGGGTAATGATACCGTGATCACTGCTGCTGGTTCTGTTCTATCTATGGGTACGAACAACAAGACAACTAAGATCCTGACCTCTGATGCTGGCAACATCGTAGCGGAAGAATCTGCGAACTCTTATAAAGTCTTTACTGAGAAGAACGCGCAAACCTTGCTGAATCCTACGTATGTACGTAAAGCAGGTGATACGATGTCTGGGCGCTTGACGGTAAGCAACAGTTCAATTATCATTGCAGGTCAAGCGGCTTGGTCAACGCTGGATGCAGTAACAGAAGCATCTAGGGGCAACTGGACGGCTGAGATCACAGCATCGGAACAGTACAACTTACTTCCTGGTTACGCGGTTCCGGTTCTTGAACCAGACCCGATTAATCCAGAAATCATGATTGTGACCCGTTATACCTATGTTAAAGCACCGGGTACTTTAACGCAGTTTGGTAACGGAACTGCATTCACTTATCAGATTTGGGCACCTCGTCCGACCTCTGGTACTGGTGTTAATGCGCTGGCGCAATCCTTCTGGATCCGTCAAATGAACCCAATTACGGGTAAATTTGATGGTTGGGGCCGCATGTATACCAGCAACAACCCGCCTACTGCTGGTGAGATTGGTGCAACGTCTGCTGTTGGTACTACGGTTAAAAACATGACTGTTACCGATTGGATCAAAGTTGGTAACGTTAAGATTTACCCAGATCCGGTTACTCAGACAGTTAAATTTGAGTGGGTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b7d5095fa8db22a81a7210a8f490c521c930eeb213a9ce26865758103f1cd2b2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7944
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of a Klebsiellaphage from environmental sample Samanta,J. and Datta,S. 1989-01 — GenBank