Protein

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Genbank accession
CAL9961327.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTLVKGNNRMIDGAAVNVRDFGAVGDGVTDDTAVFSDLRDGVFNVPDGTYLINNGTVDKSVRLVLSNNAVLKSTTGTTNIYGVLEAVNFPVDLRGGGTISVNQYQVNVGSGEDFDTIQEAIDFIPSTMWQRFHVSVADGVYDEEVYINNKHAATVNIGDPIPGEHSGLFLSGNSSNPENVKVTAFLAVSCGGATYTPQIANCQITGVNTKTNEGSSIEFYGCTAGAVTGVQFRAPGADKALMSYSSSISEENNDYGDNVYNHAFCTKHTGTISINAVTDLGILKSSRGSLIKKIGLMVSGEIYASDISQFKWGEIQPWNVYGVGCASVYEQLTKRQYGPMVFADNPATHHTYFNSPEDFESFVNGGTITKVLYEGMQVETTGDQTADLWMRRVAGLAAKEINSSQIFVLGCRLLTLTGDQRVEFGIGNGSGQPKVRFVIEDVNVYGEFERTDGSIIRTTIMPTADILGRNAVFRIDITPNFDSINSPGIDAFVTFQVLDSNFNGNKGTLDIDQDAETNFDWHISAGGTNGGASINLAELKVFRSPHLTSS
Physico‐chemical
properties
protein length:550 AA
molecular weight: 59171,07740 Da
isoelectric point:4,67730
aromaticity:0,09091
hydropathy:-0,15218

Domains

Domains [InterPro]
IPR011050
STR
14–271
IPR011050 DC_2185
IPR012334
STR
15–113
IPR012334 IPR012334
CAL9961327.1
1 550
Architecture
STR
RBD
STR 14-271 | RBD 280-544 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9961327.1
1 550
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,9712
Central domain 33 312 281 0,9001
C-terminal 313 550 237 0,9481
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-312
C-terminal
313-550

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D69
[NCBI] 		3105312 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9961327.1 [NCBI]
Genbank nucleotide accession
OZ195729.1 [NCBI]
CDS location
range 45999 -> 47651
strand +
CDS
ATGACATTAGTAAAAGGAAACAATAGGATGATTGACGGCGCGGCCGTCAATGTCCGCGACTTCGGAGCCGTAGGTGACGGAGTGACCGACGATACGGCAGTATTTTCGGATCTACGAGACGGAGTATTTAACGTACCGGATGGTACGTACTTGATTAACAATGGTACGGTAGACAAATCTGTACGGTTAGTCTTGAGTAATAATGCTGTATTGAAATCTACTACAGGTACTACTAACATCTATGGTGTACTAGAGGCTGTAAACTTCCCAGTGGACCTCAGGGGAGGGGGTACTATTTCAGTTAACCAGTACCAGGTTAATGTGGGTTCCGGTGAGGATTTCGATACTATCCAGGAGGCTATAGACTTCATACCAAGTACTATGTGGCAGCGCTTCCATGTATCAGTAGCTGATGGCGTATATGATGAAGAGGTATACATTAACAATAAGCATGCCGCTACGGTGAACATCGGAGACCCTATTCCAGGAGAACACTCCGGACTATTCCTGAGCGGCAATTCCTCTAACCCAGAAAATGTAAAGGTTACTGCGTTCCTTGCAGTATCTTGCGGAGGAGCTACATATACCCCTCAAATAGCGAACTGTCAGATCACTGGGGTAAATACCAAGACCAATGAAGGTTCTAGTATTGAGTTTTACGGGTGTACTGCAGGTGCAGTTACCGGGGTTCAGTTCCGAGCTCCCGGAGCAGATAAGGCGTTAATGTCGTACTCATCATCGATCAGCGAAGAGAATAACGACTATGGCGATAATGTATATAATCATGCATTCTGTACGAAACACACAGGTACTATCAGTATAAACGCTGTTACCGATCTAGGTATCCTTAAGTCGTCTAGAGGATCTTTGATAAAGAAAATAGGCCTCATGGTATCTGGTGAGATTTATGCAAGCGATATTTCTCAGTTTAAATGGGGTGAGATACAGCCATGGAATGTCTATGGAGTAGGATGTGCATCTGTATACGAGCAGTTAACTAAGCGTCAGTACGGCCCTATGGTGTTCGCAGATAATCCTGCTACACATCATACTTACTTTAACTCTCCGGAGGACTTCGAATCGTTTGTGAATGGAGGCACGATCACTAAGGTACTATACGAGGGAATGCAGGTAGAGACTACGGGAGATCAGACCGCAGATCTATGGATGCGTAGAGTAGCGGGTCTAGCGGCTAAGGAAATAAATAGCTCGCAGATATTCGTACTAGGATGTCGACTATTGACATTAACTGGAGACCAGAGGGTAGAATTCGGAATCGGTAATGGTTCTGGACAGCCTAAAGTCAGGTTCGTAATAGAAGACGTAAACGTATATGGGGAGTTTGAGCGTACAGACGGTTCTATAATTAGGACTACTATAATGCCTACTGCCGATATACTCGGTCGTAACGCAGTATTTCGTATAGATATAACCCCTAACTTCGACAGTATAAATAGCCCCGGAATAGATGCGTTCGTAACTTTCCAAGTGCTAGACAGCAACTTTAATGGTAACAAAGGTACTTTGGATATAGACCAAGATGCGGAGACTAACTTCGACTGGCACATCAGTGCCGGAGGTACTAATGGAGGTGCTTCTATAAACCTGGCCGAGCTGAAAGTATTCCGCTCACCCCACTTAACATCTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4020c114571b7a8095139ad6f2ff45bf617ab3ca971e3fc3da9f784f32e84330
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6959
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50