Protein

View in Explore
Genbank accession
AJP62059.1 [GenBank]
Protein name
capsid tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MLIVHEKGESNFAGPGGVTVAHNFNFSGYIPDIIEIADSGAIGEVWITDIAVNSFVVRNSGSGISAFEWSIHVAIEYTTAALVRQSSKWLSPDLTNADIEEYISQAEGVIDSVMKKTGRGLGSDYTFDPQVQGVVRDAATSLALFNCIRYDPGCFPLLEQAEMAENLAYYSALRALTLLANIRIVDHVVKLGS
Physico‐chemical
properties
protein length:193 AA
molecular weight: 20875,32840 Da
isoelectric point:4,62700
aromaticity:0,09326
hydropathy:0,17098

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage ANMV-1 virus
[NCBI] 		1605378 Viruses >
Host uncultured archaeon
[NCBI] 		115547 cellular organisms > Archaea > environmental samples >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AJP62059.1 [NCBI]
Genbank nucleotide accession
KP703175.1 [NCBI]
CDS location
range 32161 -> 32742
strand +
CDS
GTGCTGATAGTTCATGAGAAAGGCGAGTCGAATTTTGCTGGTCCGGGCGGTGTTACGGTAGCGCACAATTTCAATTTTTCGGGATATATTCCAGATATTATAGAAATCGCAGATTCCGGTGCGATAGGTGAAGTATGGATAACGGATATCGCAGTCAATTCATTTGTAGTCAGGAATTCAGGTAGTGGAATTTCAGCATTCGAATGGAGTATTCATGTAGCTATAGAATACACGACAGCGGCATTAGTACGACAATCTTCAAAATGGTTAAGTCCCGATTTAACAAATGCAGACATCGAAGAATACATATCTCAGGCGGAAGGTGTCATAGACAGTGTAATGAAGAAGACGGGAAGAGGGCTGGGGTCTGATTACACATTTGATCCTCAAGTGCAGGGTGTGGTGAGAGATGCTGCAACGAGCTTAGCGTTATTCAACTGTATACGATACGATCCCGGCTGTTTTCCATTGTTGGAACAGGCGGAAATGGCAGAGAACTTAGCTTATTATTCCGCGCTTAGGGCATTAACGTTACTGGCGAATATAAGAATAGTGGACCATGTGGTAAAATTGGGATCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f355a93b64a12ac357fe74f7cbe54ef2ae03af2836cfc5eb9a6b1e130b5d0034
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7698
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Targeted diversity generation in archaea and their viruses Paul,B.G., Bagby,S.C., Czornyj,E., Arambula,D., Handa,S., Sczyrba,A., Ghosh,P., Miller,J.F. and Valentine,D.L. 2015-03-23 — GenBank