Protein

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Genbank accession
QPZ53666.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MPFIGNQPAESYSAFQKQDFTTSATTSYTLDHPVSNQNEIALFINFVRQEPTTAYTASGTSLTLTSATASSDDMYCIYLGKAVQTVNPASGSVGSSQVAASIITGQTAETSIATDDTVLIHDTSAGALRKMTRANFVSGIGGTNTPAFHAQSSGGQTISSSDTKISYDNEIFDTAGAYDHSTNYRFTVPSGQAGKYFFYASVRVSSATDTENIQCMFKKNGSVFNKTNIFNHHFETVQNTIIADLSVGDYIEVFCYFGSSLNTQSTQNENNFFGYKLVE
Physico‐chemical
properties
protein length:279 AA
molecular weight: 30099,58840 Da
isoelectric point:4,93177
aromaticity:0,11470
hydropathy:-0,25627

Domains

Domains [InterPro]
DC_1764
ATT
65–175
DC_1764
IPR008983
RBD
142–279
IPR008983
IPR008983
RBD
145–277
IPR008983
DC_1950
RBD
145–277
DC_1950
QPZ53666.1
1 279
Architecture
ATT
RBD
ATT 65-175 | RBD 176-279
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPZ53666.1
1 279
Domain Start End Length (AA) Confidence
N-terminal 1 97 97 0,9880
Central domain 98 268 172 0,0049
C-terminal 269 279 10 0,9976
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-97
Central
98-268
C-terminal
269-279

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC203P
[NCBI] 		2796523 No lineage information
Host Candidatus Pelagibacter sp. FZCC0015
[NCBI] 		2268451 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPZ53666.1 [NCBI]
Genbank nucleotide accession
MW273925 [NCBI]
CDS location
range 14554 -> 15393
strand -
CDS
ATGCCTTTTATTGGAAACCAACCCGCTGAATCATATAGTGCTTTTCAAAAGCAAGACTTCACTACAAGTGCAACTACTTCGTACACTTTAGATCATCCAGTTTCTAATCAAAATGAAATTGCATTATTTATAAATTTTGTAAGGCAAGAACCTACAACTGCATATACTGCTAGTGGTACTTCCCTTACACTAACATCTGCAACTGCTAGTTCAGATGATATGTATTGTATTTATTTAGGTAAAGCTGTTCAAACAGTAAATCCTGCAAGTGGATCTGTTGGAAGTTCACAAGTAGCAGCATCTATAATTACTGGTCAAACTGCTGAAACTTCTATTGCTACAGACGATACTGTATTAATCCATGATACATCTGCTGGAGCATTAAGAAAAATGACTAGAGCAAACTTTGTATCTGGTATTGGTGGAACTAACACTCCAGCTTTTCATGCTCAATCATCTGGTGGTCAAACTATTAGTTCTTCAGATACAAAGATATCATACGATAATGAAATTTTTGATACTGCTGGAGCTTATGATCATTCAACAAATTACAGATTTACTGTTCCATCTGGTCAAGCTGGTAAATATTTTTTTTATGCAAGTGTAAGAGTGAGTTCTGCAACTGATACAGAAAATATACAATGTATGTTTAAAAAAAATGGAAGTGTATTTAATAAAACTAATATTTTTAATCATCATTTTGAAACAGTACAAAATACAATAATAGCAGATTTATCTGTTGGAGATTATATAGAAGTATTTTGTTATTTTGGTTCAAGTTTAAATACACAATCAACGCAAAATGAAAATAATTTTTTTGGATACAAATTAGTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a1efa05e4e6bb45c0ee74ffedf06745dca39317142faf7a82154c62c1a146cf1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8606
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic diversity, life strategies and ecology of marine HTVC010P-type pelagiphages Du,S., Qin,F., Zhang,Z. and Zhao,Y. — — GenBank