Protein

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Genbank accession
YP_009214209.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAIDKSYYTIITDVGKAKIANASVTGNKVGFVKIQLGDGGGSEYTPTESQTALKNVVWEGNIGNTTTDETAPNCIILESLIPSSVGGFMIREIGYLDDENNLIAISKYKECYKPSIEQGAVVDMKVKTVLIVSNVNNIELKIDPTIIFATLKDIQDLETKIGTVNTKIDTTKTELTNNLETAKTELNTRIDTENEKQNIKIDQLIAGGSNVASTQIITIDDWVEDAENGFKATVTHSLLTQRIVVNIIDATTKENAVTNFKIIDDNSIEVRSETRSELNVYVINGNAETHFINATVDDNRVSEMTTYSSKKIEDSISSIQLIDTSISITDANDRFTSDKLDGVLEEIMVEISGQRTKGITIVNNLIDMI
Physico‐chemical
properties
protein length:369 AA
molecular weight: 40473,06190 Da
isoelectric point:4,51952
aromaticity:0,04607
hydropathy:-0,20054

Domains

Domains [InterPro]
IPR051934
Unmapped
4–331
IPR051934
IPR022225
ATT
5–151
IPR022225 Coil
DC_0386
STR
5–369
DC_0386
YP_009214209.1
1 369
Architecture
ATT
STR
ATT 5-151 | STR 152-369
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiMMP03
[NCBI] 		1582157 Uroviricota > Caudoviricetes > Yongloolinvirus >
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009214209.1 [NCBI]
Genbank nucleotide accession
NC_028959.1 [NCBI]
CDS location
range 20717 -> 21826
strand +
CDS
TTGGCTATAGATAAAAGTTATTACACTATAATTACAGATGTAGGAAAAGCAAAGATAGCAAATGCAAGTGTCACAGGTAATAAAGTGGGATTTGTAAAAATTCAACTTGGTGATGGAGGAGGGAGTGAATATACTCCAACTGAGAGTCAGACAGCTCTCAAAAACGTGGTATGGGAAGGCAATATTGGAAATACAACTACAGATGAAACTGCACCAAATTGTATAATATTAGAGAGTTTAATACCATCAAGTGTAGGCGGATTTATGATAAGAGAAATAGGATATTTAGATGATGAAAATAATTTAATTGCCATTTCTAAATACAAAGAGTGTTATAAACCTTCTATAGAACAAGGTGCAGTGGTAGACATGAAGGTTAAAACTGTGCTTATTGTATCTAATGTAAATAATATAGAACTTAAAATTGACCCAACAATAATCTTTGCAACACTCAAAGATATACAAGACTTAGAAACTAAAATAGGTACTGTTAATACTAAAATAGATACAACTAAAACAGAATTAACAAATAATTTAGAAACTGCTAAAACAGAGTTAAATACTAGAATTGACACAGAAAATGAGAAACAAAATATTAAAATTGACCAATTAATCGCAGGTGGTTCAAATGTGGCATCTACTCAAATAATAACAATTGATGATTGGGTTGAGGATGCAGAAAATGGATTCAAAGCAACTGTAACACATAGTTTATTAACACAGAGAATAGTTGTAAATATTATAGATGCTACTACAAAAGAAAATGCAGTTACAAACTTTAAAATTATAGATGATAATTCTATAGAAGTTAGAAGTGAAACAAGGTCAGAATTAAACGTTTATGTGATAAATGGAAATGCAGAAACTCATTTTATTAATGCAACTGTAGATGATAACAGAGTGTCTGAAATGACTACTTATTCATCTAAGAAAATAGAGGATTCTATTAGCAGTATACAGCTTATAGATACCAGTATAAGTATTACAGATGCTAATGATAGATTTACAAGTGATAAGTTAGATGGAGTATTAGAGGAAATAATGGTAGAAATAAGTGGTCAAAGAACTAAAGGAATAACTATAGTGAATAATTTAATAGATATGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1d3836c568022a337be4a0d47fda7f01f7857d91f2fa4a6dee522da81113699f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8601
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole Genome Sequence and Molecular Characterization of Siphoviridae / Myoviridae Phage Infecting Clostridium difficile Monot,M. 2011-08-01 — GenBank