Protein

View in Explore
Genbank accession
CAQ82056.1 [GenBank]
Protein name
host specificity protein J.
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MGHKQIQTSDIRHQTGEGDRVGKGGGRAHTPVEAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQSILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPEGFESSGAETALGVEVTKAKPVTRTITSANIDRLRVTFGVQSLLETTSKGDRNPSSVRLLIQLQRNGNWVTEKDVTINGKTTSQFLASVILDNLPPRPFNIRMVRETADSTSDQLQNKTLWSSYTEIIDVKQCYPNTAIVGLQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCLWDMLTHPRYGMGKRLGAADVDKWALYAIAQYCDQMVPDGFGGTEPRMTFNAYLSQQRKAWDVLSDFCSAMRCMPVWNGQTLTFVQDSPSDVVWPYTNSDVVVDDNGVGFRYSFSALKDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTSRGQAHRAGLWVIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRVLSIDAASRTLTLDREVTLPETGAATVNLINGSGKPVSVAITAHPAPDRIQVSTLPDGVETYGVWGLSLPSLRRRLFRCVSIRENTDGTFAITAVQHVPEKEAIVDNGAHFDGDQSGTLNSVIPPAVQHLTVEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGEGSRLVTTAITADTEHRSSGLPLGEYTLTVRAINSYGQQGEPATTTFRINAPAVPATIELTPGYFQITAVPVLAVYDPTVQFEFWFSEKRITNTAQVEKSARYLGSGSQWTVQGSRIKPGTDFWFYVRSVNLVGKSAFVEVSGQPSNDGEGYLEFFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEITQTVSKTLENQSATIQQIQRVQKDTNDDLAALYMLKVQKTKDGIPYVAGIGAGIEDTDGQPLSNILLLADRIAMINPESGNSTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPTFSLTPDGRLTAKNADISGSVNANSGTLNNVTINENCTIKGMLEAPQVRGDFVKAVSKAFPKKVGTWGNTETPNGTVTVTISDDHNFDRQIIIPPIIFNGIAYDDPGSGNNPGGTRYTGYGFEVRKNGVLIASRETKGAIPGSYSAVIDMPSGGGSVTLEFKIFQKGNQGAGNITDCTVIVTKKAASGISIR
Physico‐chemical
properties
protein length:1184 AA
molecular weight: 128704,13060 Da
isoelectric point:5,64465
aromaticity:0,07432
hydropathy:-0,31258

Domains

Domains [InterPro]
DC_0023
STR
2–1179
DC_0023
IPR053171
Unmapped
21–865
IPR053171 IPR015406 IPR021034
IPR055385
ATT
106–227
IPR055385 IPR032876 IPR055383 IPR057587 Coil
IPR003961
STR
638–727
IPR003961
IPR036116
STR
702–821
IPR036116
CAQ82056.1
1 1184
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
STR 2-105 | ATT 106-227 | STR 228-349 | ATT 350-518 | STR 519-734 | ATT 735-837 | STR 838-1183 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAQ82056.1
1 1184
Domain Start End Length (AA) Confidence
N-terminal 1 1040 1040 0,9374
Central domain 1041 1173 134 0,1036
C-terminal 1174 1184 10 0,9808
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1040
Central
1041-1173
C-terminal
1174-1184

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacteria phage 2851
[NCBI] 		254397 Uroviricota > Caudoviricetes > Pankowvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
71a6e99824747eb42bdaad10558f237b06bf06cacd18a7be734a2cb0ddac648d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7988
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50