Protein

View in Explore
Genbank accession
AGS82090.1 [GenBank]
Protein name
putative tail fiber/intimin-like protein
RBP type
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MATLAEFIRQAVALADYRNLAVENPIPVQLPLGNGENMTVVVSFMEPNNVTLPFNVSWIVVDPDSNDYLKVLRRTSALPMPGYRNTWVEITTMEDLIAEPQFWDLSSGFNLGEVEAPQLGAATIDVRGLVQLNREYAPDRDNPLVVGSNDARMSNARTPLPHTHPKLPITMMRGATGINAYTAKIGTANSPKAGEILTITGPGAQPNEWLGEWRRPTAADLVYDGPTFDDLIINGPVGNTIDETMPFTFSADAAFSDGQTIVGVAASWSVIGNGQYASIGTLTGIFQSLDVDQDQTVRVEARWTHPESGVQRSKFVDILVVDRTIQVNLVSIELNGPDEIEENSIATYTVTAHFDNGTSTGVTPTTFTSSNPGAGEFNAETGVLEVGELTTDQTTTISATYNFNGVTRDATLQVSCLDTTVYPANAVIVGPNTVDENTTVNFVLRVTYTNGTQVDVAASDWASSDEEAGTINATTGEFVAATNLFEDKQTVLTASYTLEGRTVNASKQVLVKDVTVYPRSATILGMASVNEGTIAQYQFRVTFSDDTSAVVSVSNWALDNPAVGTINPTTGQLVAAADVSVDTLGVISASYSANGQTVSATFNVTVTDETNYPASARIVGNAQMDENSTQTVTFEVTYTDGSKVIESITNWASSNTSAATIGAASGLVTAAVNLTANGTTTISGSFTRDGRTVTAELALTVRDTTNYPVSAVINGPATINEGGQADYTLAVTFTDGTTANRAANWSITGGNGATINTSGRVTAPANVDANTGATINASFTLDGRTVNAPARAIQIIDTTVYPSTARIIGPNSVPENTSQTYQLEVTFSDATKAIVPVTNWASSVPTTGTIDANTGLFSALETTGNKVTKITASYTAQGRTVGSELNITVVDATNYPVSAAIEGPAVVAEDGTAQYNLRVTFTDTTSSLVPVTDWASSNEGVGVINPTTGAFVAAANLLADGTTTISASYTSEGIRVDAQLTVTVEDETVYPVSAVITGAAVVDSLQTSQYELRVTFDDNSTLVMQADSWSSSNTTTGGTIDENGLFTAVENVSGSNINTTLTATYSLDGREVTATRVIAVHDVTNYPASVAISGPNSVNSSVSDGPGTAQYTAEVTYLDGTKNTLPSGTWSVEGASQSDPVGTIDAAGLFTANQTPGGGNRNISIKFSYTEFGRTVNGSKSVAFVVVPIPQSLAINGPSEVASDVSQPYTARLTLNNGGTMDVLATFSTTAASNIASMSADGTLAVQHLAADTPIELHATYTGNGITVTADRTITGKKAVELDSITVSGPTNLASGNSAQYTVTAHYDNGTTADVTASATFSSSVPAAGTFSGVTRGLFQAANVQSDTDTVLTFGFTANGISRSATVNLQVAAPLPTGSNLPRYGVAMFSDTDFTGGKTGTDVNYGNPYTRWSGIQDFADSVLTNLMPSANSSEQFTLNIGEAQYGYFMHLKSLSNYCEFTDLAINVPGGMGGITWTPEGEIGSTFDPIEVTYDCHDGNGPQQWLVYRTDWDTLGSITFRVRYT
Physico‐chemical
properties
protein length:1524 AA
molecular weight: 159811,89240 Da
isoelectric point:4,22663
aromaticity:0,07415
hydropathy:-0,08320

Domains

Domains [InterPro]
DC_1992
STR
224–425
DC_1992 DC_1992 DC_1992 DC_1992
G3DSA:2.60.40.1080
STR
325–417
G3DSA:2.60.40.1080 DC_1992 G3DSA:2.60.40.1080 G3DSA:2.60.40.1080 DC_1992 G3DSA:2.60.40.1080
DC_1992
STR
704–898
DC_1992
AGS82090.1
1 1524
Architecture
STR
STR 224-1380 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaBG
[NCBI] 		1335230 Uroviricota > Caudoviricetes > Baikalvirus >
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGS82090.1 [NCBI]
Genbank nucleotide accession
KF147891 [NCBI]
CDS location
range 167571 -> 172145
strand +
CDS
ATGGCAACCCTGGCCGAATTCATTCGTCAGGCGGTGGCACTGGCTGACTACCGGAACCTCGCAGTGGAGAACCCGATCCCTGTGCAGCTTCCGCTGGGCAACGGCGAGAACATGACTGTTGTGGTATCCTTCATGGAGCCCAACAACGTCACTCTGCCGTTCAACGTCAGCTGGATCGTCGTCGATCCTGATTCCAACGACTACCTGAAAGTGCTGCGCCGTACCTCTGCTCTTCCGATGCCGGGCTATCGCAACACCTGGGTGGAAATCACCACCATGGAAGACCTCATCGCAGAGCCTCAGTTCTGGGACCTCAGCAGCGGGTTCAACCTCGGTGAAGTCGAAGCTCCCCAGCTCGGTGCCGCTACGATTGACGTGCGCGGCCTTGTGCAACTGAACCGCGAGTACGCTCCTGACCGCGATAACCCGCTGGTTGTCGGCAGCAACGACGCTCGTATGTCCAACGCCCGTACTCCGCTGCCGCATACGCACCCGAAGCTCCCCATCACCATGATGCGCGGCGCTACTGGGATCAATGCGTACACGGCCAAGATCGGCACCGCCAATTCGCCGAAAGCAGGCGAGATTCTGACCATCACTGGCCCGGGTGCTCAGCCCAATGAGTGGCTGGGCGAATGGCGTCGTCCGACTGCGGCCGATCTGGTATACGACGGTCCTACGTTCGATGACCTGATCATCAACGGCCCAGTTGGCAACACCATCGACGAAACCATGCCGTTCACGTTCTCCGCTGACGCGGCATTCAGCGATGGTCAGACCATCGTTGGCGTTGCTGCTTCGTGGTCTGTGATCGGTAACGGCCAGTACGCCTCGATCGGTACCCTGACTGGTATCTTCCAGTCGCTGGACGTTGATCAGGACCAGACCGTGCGCGTCGAAGCTCGCTGGACTCACCCGGAATCGGGCGTACAGCGCAGCAAGTTCGTGGACATCCTCGTGGTCGACCGTACCATCCAGGTCAACCTCGTCAGCATCGAACTGAACGGTCCGGACGAAATCGAAGAAAACAGCATCGCCACGTACACCGTGACGGCGCACTTCGACAACGGCACCAGCACTGGCGTAACCCCGACGACGTTCACTTCGTCCAACCCGGGTGCCGGTGAGTTCAACGCTGAGACCGGCGTATTGGAAGTTGGTGAACTCACCACCGACCAGACCACTACGATCAGCGCGACCTACAACTTCAATGGCGTTACTCGGGATGCTACCTTGCAGGTTAGCTGCCTGGACACCACTGTCTATCCGGCCAATGCCGTGATCGTAGGTCCGAACACCGTTGACGAAAACACCACCGTGAACTTCGTGCTGCGTGTGACCTACACCAACGGCACTCAGGTGGACGTCGCTGCTTCCGACTGGGCTTCCAGCGACGAAGAAGCAGGTACTATCAACGCGACCACAGGCGAGTTCGTGGCTGCGACCAACCTGTTCGAGGACAAGCAGACCGTACTCACGGCCAGCTACACTCTGGAAGGTCGTACCGTCAATGCGTCCAAGCAAGTGCTGGTCAAGGACGTCACTGTGTACCCGCGCAGTGCCACGATCTTGGGCATGGCTTCGGTCAACGAAGGTACCATCGCGCAGTACCAGTTCCGCGTGACGTTCAGCGACGACACCTCGGCTGTTGTTTCCGTGTCCAACTGGGCACTCGACAACCCGGCCGTCGGCACCATCAACCCGACCACCGGTCAACTCGTTGCGGCTGCCGATGTCAGTGTGGACACTCTGGGCGTCATCAGCGCCTCGTACTCCGCCAACGGCCAGACTGTGAGCGCCACGTTCAACGTGACTGTCACCGACGAGACCAACTATCCGGCGTCCGCTCGCATCGTGGGCAACGCTCAGATGGATGAGAACTCGACCCAGACCGTGACGTTCGAGGTGACCTACACCGACGGTAGCAAGGTAATCGAGTCGATCACCAACTGGGCTTCGTCCAACACCAGCGCTGCAACCATCGGTGCCGCAAGTGGCCTGGTAACCGCTGCTGTGAACCTCACGGCGAACGGCACCACTACGATCAGCGGCAGCTTCACCCGCGATGGTCGTACCGTGACGGCCGAACTGGCGTTGACTGTGCGTGACACCACGAACTATCCTGTGAGTGCTGTCATCAACGGTCCTGCAACCATCAACGAAGGCGGGCAGGCAGACTATACGCTGGCTGTTACCTTCACCGATGGCACTACGGCAAACCGTGCAGCCAACTGGAGCATCACTGGTGGCAACGGCGCTACGATCAATACGTCGGGTCGCGTAACTGCACCTGCAAACGTGGACGCCAACACCGGCGCTACGATCAACGCCTCGTTCACTCTGGACGGTCGTACGGTCAACGCACCTGCACGTGCAATCCAGATCATCGATACGACTGTGTATCCGAGCACGGCGCGCATCATCGGCCCGAACTCGGTCCCGGAAAACACGTCGCAGACGTACCAGCTGGAAGTTACCTTCAGCGATGCCACCAAGGCTATCGTGCCGGTTACCAACTGGGCGTCCAGTGTGCCTACTACAGGTACCATTGACGCGAACACCGGCCTGTTCAGTGCTCTGGAAACCACCGGCAACAAGGTCACCAAAATCACCGCGTCGTACACTGCACAAGGCCGCACTGTCGGCAGCGAGCTGAACATCACTGTGGTTGACGCCACCAACTATCCGGTCTCGGCCGCGATTGAAGGTCCGGCTGTCGTGGCTGAGGATGGCACTGCGCAGTACAACCTGCGGGTGACGTTCACCGATACCACGTCGTCTTTGGTGCCAGTCACTGACTGGGCATCGAGCAACGAGGGCGTTGGCGTCATCAACCCGACCACTGGTGCGTTTGTCGCTGCTGCAAACCTGCTGGCCGATGGCACTACCACGATCAGCGCGTCGTACACGTCCGAAGGTATCCGCGTCGATGCCCAGCTCACCGTTACCGTGGAAGACGAAACCGTCTATCCGGTTAGCGCTGTGATCACCGGTGCAGCCGTCGTGGACTCGCTGCAAACCTCGCAGTATGAGCTGCGCGTGACCTTCGATGACAACTCGACCCTGGTAATGCAGGCTGATAGCTGGTCGTCGAGCAACACCACCACCGGCGGCACCATCGACGAGAACGGCCTGTTCACTGCTGTCGAGAACGTGTCTGGTTCCAACATCAACACGACTCTGACCGCGACCTACAGCCTGGATGGTCGTGAAGTCACCGCGACTCGCGTTATCGCCGTGCATGACGTGACGAACTATCCGGCAAGCGTCGCTATCAGCGGCCCGAACTCGGTGAACTCGTCCGTGAGTGATGGTCCTGGCACTGCGCAGTACACCGCGGAAGTGACGTATCTGGACGGTACCAAGAACACGCTACCCTCCGGTACGTGGTCTGTCGAAGGCGCTTCACAGTCCGATCCTGTGGGCACCATCGATGCGGCCGGCCTGTTCACTGCCAACCAAACTCCGGGTGGCGGCAACCGCAACATTTCGATCAAGTTCAGCTACACCGAATTTGGTCGTACCGTCAACGGCTCCAAGTCTGTGGCGTTCGTTGTTGTGCCGATTCCGCAGTCGCTGGCCATCAATGGTCCGAGCGAAGTGGCTTCGGATGTTTCGCAGCCGTACACTGCACGCCTGACGCTGAACAACGGTGGCACCATGGACGTACTCGCTACGTTCAGCACTACCGCAGCATCCAACATCGCGTCCATGTCGGCGGATGGTACTCTGGCTGTGCAACATCTGGCCGCAGATACTCCGATCGAACTGCACGCGACGTACACTGGCAATGGCATCACTGTCACCGCCGACCGCACCATCACTGGTAAGAAGGCGGTGGAACTCGATAGCATCACTGTATCGGGTCCGACCAACCTTGCCAGCGGTAACAGCGCGCAGTACACAGTCACTGCTCACTACGACAACGGAACCACGGCTGATGTTACGGCCTCGGCTACGTTCTCCAGCAGTGTTCCTGCTGCCGGTACGTTCAGTGGCGTGACTCGCGGTCTGTTCCAGGCTGCAAACGTGCAGAGCGACACCGACACCGTGCTGACGTTCGGCTTCACTGCGAACGGCATCAGCCGATCCGCCACTGTCAACCTGCAGGTGGCTGCTCCGTTGCCAACTGGTAGCAACTTGCCGCGCTACGGCGTAGCAATGTTCTCCGACACGGACTTCACCGGCGGTAAGACTGGCACTGACGTGAACTACGGTAATCCGTACACCCGTTGGTCCGGTATCCAGGACTTCGCCGATTCGGTGTTGACCAACCTGATGCCGAGCGCCAACAGCAGCGAGCAGTTCACGCTCAACATCGGCGAAGCCCAGTACGGCTACTTCATGCACTTGAAGTCGCTGTCCAACTACTGCGAGTTCACCGATCTTGCGATCAACGTGCCTGGCGGTATGGGCGGTATCACGTGGACTCCGGAAGGTGAAATCGGCAGCACCTTCGATCCGATCGAAGTTACCTACGACTGTCACGATGGCAACGGCCCGCAACAGTGGCTGGTGTATCGTACCGACTGGGATACCCTCGGCTCGATTACCTTCAGGGTTCGTTACACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b77dd3406031ba381cf29cd1a8231ff625b009da90a04cff4be84a89ccd50214
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8036
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of the Novel Giant Pseudomonas Phage PaBG Sykilinda,N.N., Bondar,A.A., Gorshkova,A.S., Kurochkina,L.P., Kulikov,E.E., Shneider,M.M., Kadykov,V.A., Solovjeva,N.V., Kabilov,M.R., Mesyanzhinov,V.V., Vlassov,V.V., Drukker,V.V. and Miroshnikov,K.A. 2014 24407628 GenBank