Protein

View in Explore
Genbank accession
CDL73653.1 [GenBank]
Protein name
PblB-type protein
RBP type
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MDALTRRQFDRAMFAKERTLAIRVGEYASRDIKEASFEYGYIKGDTYKPGGTCAGSGKITFTSIITTFNKLDTLHPEIGLLVGDTYQWVKMGEYFINDIEIDRNRNTTTLELMDGMFKLNREYVTDLHFPAEVREVIQEICLKTGIELANDYFGISAMRYHIEQVPEGKKLSFRDMLSAMTQMIGMSCFFNREGKMEIRDLTESNITINADSYFLHGLTKSEIEYQIAGITCKTDKKSLTVGMTTGRSLELDNVFITQSALNDLYYKLKNLTYYPYNLNYQGHLLLEVGQWVTIQTNKKETFKVPVLSQSFIFKGGLRGRISADSKAGNDTQYSYEGTITKQIKQQDGFEAKIQAQIEAADKDFDQKVDKIKKDFNDQVELAKARAEEVKRELSDTINQRFNSFDNGPLKEAKRKAEEALRNAGASSSLAQESKRIGLDSVARLEAFKSQTTSAQTALSGDLDVLKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELDGASTLLAQEAKRIELDSVARLEAFKSQTTSAQTALSGDLDVLKRTIANDIRPKQAQAEAEIAKQVEALSRTKNELAGVKSAQATYEETTTRRLSELTNLANGKASKSELTQTAEELASRIASVQVGGINLLRNTASLLIGDRSKGCWMSSSGGNGRAISVEVLAPPKKMIKNMIRVIENTNGGNKDLTQLVRLRIGEKYTISCYARVASDSPNANVNLLFRSWANDTDLNRKFQKSISHKNWQKYSFTFTADAIENSIQFGQSGAGIIEICAPKIESGTLATDYSEAPEDIEGQISTVESTFKQRADSLEAGVSRLTEGLRTKADISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNVTKDKASKSELTQTAEELASKIASVQASGRNLFLNSLFKQDISKTGIWTTSTYTATIDSESKYLGHTALKIIGLNPSGRDGGNPKVTYPALGQFGKVIPGSTTNQDVTISFYAKANKNGIMLRSRLGNIGYKTGNVTLSTEIKRYVVHIPKGWTNESKRTTNEWLFNFNQEGTVWIWMPKFEISDVDTSYSEAPEDIEGQISTVESTFKQRTNSLEAGVNRLTEGLRTKADISSLNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKASKSELTQTAEELSSKIASVHLGRRNLLKGTKELARYKPVSEYNGFKVIRTVAGATRYQDSYVERTVIPTAGTEYIAIFYARASENDYPVRCHFYNPNTVVSSENSSGYKSRSSDGLSIIRLSTDWQLCWVKWTQTATDQAKTVIIGRHGPQVGGKEGVWVEICAPAIFEGNLAGDWSPAYEDQDERVSAVESNFKQRADSLEAGVSRLTEGLRTKADISALNVTAENIRQSVKSLETDTQNKLNQKLSQAEFEVRAGSIRQEILNATKDKADKTLVVAEAGKLREEFSKMKVGGRNLWIKSKTVGAVIEKLPENHVTGQKECYRLENNSTLTFNLEPDFSSRLYQKVTFSAWIKYENVVQGRNFWNVFNCFKHYLFRKNSETGVQSGPDYATLGMYKGSADWKYITFTYDYSEKTNFDQLKTSLRFNLEGATSGTAWVTGIKVEIGSVATDWSPAPEDGENELLVAKTEFKRTADGLSTKMAAVESYVGQDGQRQEALQRYTREESTRQATAVRELVNRDFVGKATYQEDVKGINQRIEAVKTSANKDIASQIASYRQSVDGKFTDISSQITTYKQDVGGQISGLSNRLTSSEQGTTTQISNLSNRINSNKQGTDNQISNLKTQVATNKDNAERQMGRISDQVSANKANADRQFANVTNQLVRKVETTDFQRVKETSKLYERILGNTENGIADKVARMALTNQLFQVEVGKYSVSGPNLIKNSDFKNGTNEWGSTQNLGRLVKHSFYHNGQKDLMRLSNATKNENFLYSHRFNLERNTDYVLNFRGFNNSALASYDVYILGRRAGESDGFTIVKKVVSSKKLSTSRCEDVSVTFNSGEMDNAYIRFDNNGSSSGTADLYITEVDLYKGYKPRTWQPHPEDAVADANKKLEATQTKMTQLAGSWAVQNINSAGDIISGINLGANGHNRFVGKLTHITGETLIDRAVIKSAMVDKLKTANFEAGSVTTTILEAEAVTAEKLKVDNALIKKLTATDAFIDELISKRIFSIKVESVISSSTFLEAYQGRIGGFTLGQFDQGGGRWISGVNQFSVGMGNGAGYGVRTAFWANWGNNWNYAGPKAWNVNTDGKMYCRNEVGFYDQVDFSNSSRANFYGNTTFSRSPVFSNGIELGSKDVLGDGWNPKGGRNAVVWWNQIGSGSVKYWMEQKSDRRLKENITDTAVKALDKINRLRMVAFDFIENKKHEEIGLIAQEAETIVPRIVSRDPENPDGYLHIDYTALVPYLIKAIQELNQKIEKMEKTIA
Physico‐chemical
properties
protein length:2417 AA
molecular weight: 269015,49040 Da
isoelectric point:8,67082
aromaticity:0,08151
hydropathy:-0,53637

Domains

Domains [InterPro]
DC_0909
STR
1–500
DC_0909 Coil G3DSA:2.60.120.260 PTHR34491 IPR008979 IPR030392
Coil
Unmapped
372–399
Coil Coil IPR008979 Coil Coil DC_0720 Coil G3DSA:2.60.120.260 DC_0720
DC_0909
STR
487–758
DC_0909 DC_0909 G3DSA:2.60.120.260 IPR030392
DC_0720
STR
704–935
DC_0720 DC_0976
CDL73653.1
1 2417
Architecture
STR
RBD
STR 1-2384 | RBD 2385-2417
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage IC1
[NCBI] 		1448276 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus pneumoniae
[NCBI] 		1313 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CDL73653.1 [NCBI]
Genbank nucleotide accession
HG799490 [NCBI]
CDS location
range 2169 -> 9422
strand -
CDS
ATGGACGCTTTAACTAGACGACAATTTGACAGAGCCATGTTTGCCAAGGAAAGGACGCTGGCTATTCGTGTTGGTGAATATGCTTCACGGGATATCAAAGAGGCTAGTTTTGAGTATGGCTACATCAAGGGCGATACTTATAAGCCTGGTGGAACCTGCGCTGGTAGCGGTAAAATTACCTTTACCAGTATCATTACCACGTTCAATAAGCTGGATACCCTGCACCCTGAGATTGGTCTACTGGTTGGGGATACCTACCAGTGGGTCAAGATGGGGGAATACTTCATCAACGATATTGAGATTGACCGAAACCGCAACACAACCACACTTGAACTTATGGACGGTATGTTTAAGCTCAATCGTGAGTACGTGACGGATTTGCATTTCCCAGCTGAAGTACGAGAGGTTATTCAGGAAATCTGCCTGAAAACAGGCATTGAGTTAGCGAATGACTATTTCGGAATCAGCGCTATGCGTTACCATATCGAGCAAGTTCCTGAAGGTAAGAAACTTTCGTTCAGGGATATGCTGAGCGCTATGACTCAGATGATTGGGATGTCTTGCTTCTTCAACCGAGAAGGAAAGATGGAAATCCGTGATTTGACCGAGTCCAACATCACGATTAACGCTGACAGTTACTTCTTGCATGGATTGACCAAGAGTGAAATCGAGTATCAGATAGCTGGTATCACTTGTAAGACGGATAAGAAGTCTCTGACGGTCGGTATGACAACAGGTCGGTCTTTGGAACTTGATAATGTCTTCATAACCCAGAGCGCTTTAAATGACTTGTATTACAAACTGAAAAACCTAACTTACTATCCGTATAATCTCAACTACCAAGGACATTTGTTACTTGAGGTTGGGCAGTGGGTAACCATTCAGACCAACAAGAAAGAGACTTTTAAAGTTCCTGTCTTAAGTCAGAGCTTTATCTTTAAAGGTGGTCTGAGAGGTCGTATCAGTGCAGATAGTAAGGCTGGAAACGATACCCAGTATTCTTACGAGGGTACGATTACCAAGCAGATTAAGCAACAAGATGGCTTTGAAGCGAAAATCCAAGCGCAGATTGAAGCAGCAGATAAAGATTTTGACCAAAAGGTCGACAAAATCAAAAAAGACTTTAACGATCAAGTAGAACTGGCCAAAGCCAGAGCTGAAGAAGTCAAGAGAGAACTGTCTGACACTATCAATCAGCGCTTTAATAGCTTTGACAACGGGCCATTGAAAGAAGCTAAGCGCAAGGCTGAGGAAGCTTTGCGAAATGCTGGCGCAAGTAGTTCTCTTGCTCAGGAATCCAAGCGGATTGGGCTGGATTCTGTTGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCAGGTGACTTGGATGTTCTAAAACGAACTATCGCGAATGATATTCGACCGAAGCAAGCACAGGCTGAAGCTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAAAATGAACTGGATGGCGCAAGTACCCTGCTTGCACAGGAAGCTAAGCGGATTGAGCTGGATTCTGTTGCTAGACTTGAAGCGTTTAAGTCGCAGACTACGAGCGCACAAACGGCTCTGTCAGGTGACTTGGATGTTCTAAAACGAACTATCGCGAATGATATTCGACCGAAGCAAGCACAGGCTGAAGCTGAGATTGCCAAGCAAGTTGAAGCACTTAGCCGGACTAAAAATGAACTGGCTGGCGTGAAGTCAGCGCAAGCGACGTATGAGGAGACGACGACTCGTAGACTGTCAGAACTGACCAACTTGGCTAATGGTAAAGCCAGCAAGTCAGAACTCACGCAGACGGCTGAGGAGCTAGCTAGTCGGATTGCGAGTGTGCAAGTCGGAGGAATTAACCTCTTGCGTAATACTGCGAGTTTGTTGATTGGCGATCGTTCAAAAGGATGTTGGATGAGTTCAAGCGGAGGAAATGGGCGAGCGATTAGCGTAGAAGTTTTGGCTCCTCCCAAAAAAATGATAAAAAACATGATTCGTGTTATTGAAAATACGAATGGTGGAAATAAAGATTTAACTCAACTTGTTAGATTGCGAATTGGTGAAAAGTACACGATTTCTTGTTATGCAAGGGTTGCTAGCGATAGCCCAAATGCAAACGTGAACTTGCTATTTCGTTCGTGGGCAAATGATACCGATTTAAATCGCAAATTTCAGAAATCCATCTCTCATAAAAATTGGCAAAAATATTCATTTACATTTACTGCTGATGCAATTGAAAATTCAATTCAATTTGGACAATCTGGCGCAGGAATTATCGAAATATGCGCTCCGAAAATCGAATCAGGAACGTTAGCGACTGATTACAGCGAAGCTCCTGAAGATATAGAAGGTCAGATTTCAACAGTTGAATCGACCTTCAAACAGCGTGCTGATTCACTCGAAGCTGGTGTAAGCCGTCTGACTGAAGGGCTTAGAACTAAAGCGGATATCAGCGCACTCAACGTGACTGCTGAAAATATTAGGCAGTCGGTGAAGAGTCTTGAGACAGACACGCAGAACAAACTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCTGGCTCTATACGTCAGGAAATCCTGAACGTAACGAAGGATAAAGCCAGCAAGTCAGAACTCACGCAAACAGCTGAGGAGCTGGCTAGTAAGATAGCGAGTGTGCAGGCATCCGGTCGAAATCTATTCTTGAATTCACTATTCAAGCAGGATATTTCAAAAACAGGAATTTGGACAACGAGTACATATACGGCTACTATCGATAGCGAAAGTAAGTATCTTGGACACACCGCTCTTAAAATCATAGGTCTGAATCCATCTGGCCGTGATGGAGGTAATCCCAAGGTTACTTATCCAGCTCTGGGTCAATTCGGGAAAGTAATTCCCGGAAGTACGACTAATCAAGATGTAACCATTAGTTTTTATGCTAAGGCAAATAAAAATGGAATAATGCTAAGATCTCGATTAGGGAATATCGGATATAAAACTGGAAATGTGACATTGTCGACAGAAATTAAACGATATGTTGTCCATATTCCAAAAGGTTGGACAAACGAATCCAAGCGGACCACAAATGAATGGTTGTTCAATTTCAACCAGGAAGGAACCGTTTGGATTTGGATGCCGAAGTTTGAAATAAGCGATGTAGATACTTCTTATTCAGAAGCTCCTGAAGATATAGAAGGTCAGATTTCAACAGTAGAATCGACCTTCAAACAACGAACCAACTCACTCGAAGCTGGTGTGAATCGTCTGACTGAAGGCCTTAGAACCAAAGCCGATATCAGCTCACTCAATGTGACTGCTGAAAATATCCGGCAATCTGTGAAGAGCCTTGAGACAGATACGCAGAACAAGCTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCCGGCTCTATCCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCCAGCAAGTCAGAACTCACGCAAACAGCTGAGGAGCTCTCTAGTAAGATAGCGAGTGTGCACTTAGGGCGCAGAAATCTGCTGAAAGGCACAAAAGAGCTTGCGAGATACAAGCCGGTTAGTGAATATAATGGTTTTAAAGTTATCAGAACAGTCGCAGGAGCAACTAGATATCAGGATAGCTATGTGGAAAGAACCGTTATACCAACGGCTGGGACAGAGTATATAGCTATCTTTTATGCACGAGCCAGTGAAAATGACTATCCTGTGCGCTGTCATTTTTACAATCCTAACACGGTTGTATCATCAGAAAACAGCAGCGGATATAAGTCAAGGTCGTCAGATGGCTTGTCTATTATCCGTCTCTCGACAGACTGGCAGTTGTGCTGGGTTAAATGGACCCAAACCGCAACAGATCAAGCCAAGACGGTCATCATTGGCCGCCATGGCCCTCAAGTAGGCGGTAAAGAGGGGGTATGGGTTGAAATCTGCGCCCCTGCCATTTTTGAGGGAAATCTTGCAGGTGACTGGTCACCAGCATACGAAGACCAAGACGAACGTGTCTCAGCGGTCGAATCCAACTTTAAACAGCGTGCTGATTCACTCGAAGCTGGTGTAAGCCGTCTGACTGAAGGCCTTAGAACCAAAGCCGATATCAGCGCACTCAACGTGACTGCTGAGAATATTAGGCAATCTGTGAAGAGTCTTGAGACAGACACGCAGAACAAACTAAATCAGAAGTTGAGTCAGGCTGAATTTGAGGTGCGAGCTGGCTCTATTCGTCAGGAAATCCTGAACGCAACCAAGGATAAAGCAGATAAGACTCTTGTCGTGGCTGAAGCCGGGAAATTGCGTGAAGAATTTTCAAAAATGAAGGTGGGAGGCCGGAATCTATGGATAAAATCCAAGACGGTTGGAGCTGTAATTGAAAAATTACCTGAAAACCACGTCACAGGTCAAAAAGAATGCTATAGGCTAGAGAACAACTCTACTTTAACGTTCAACCTTGAACCAGATTTCAGCTCAAGGTTGTATCAAAAAGTTACTTTTAGCGCTTGGATCAAGTACGAAAATGTAGTCCAAGGTCGAAATTTTTGGAATGTATTTAATTGCTTCAAACATTATCTTTTTAGAAAAAATAGTGAGACCGGAGTACAGAGTGGTCCAGATTATGCTACGCTTGGTATGTATAAAGGTTCGGCAGATTGGAAATATATTACATTCACTTATGACTACTCTGAAAAAACAAATTTTGATCAATTGAAGACATCATTGCGATTCAATCTTGAAGGTGCTACAAGCGGTACAGCTTGGGTAACAGGAATCAAGGTTGAAATCGGTAGTGTGGCGACGGACTGGAGTCCTGCGCCTGAGGACGGAGAAAATGAGCTTTTAGTCGCTAAAACCGAGTTCAAGAGGACAGCTGATGGCCTATCTACTAAGATGGCAGCAGTTGAGAGCTATGTTGGTCAAGACGGTCAGCGACAGGAAGCCCTACAGCGCTATACTCGTGAGGAGAGCACGAGACAAGCGACAGCAGTCCGTGAGCTGGTCAATCGTGATTTCGTTGGTAAGGCTACTTATCAAGAAGATGTTAAGGGTATCAATCAAAGGATTGAAGCTGTTAAAACTAGTGCGAATAAAGACATCGCTAGTCAAATCGCTAGCTATCGCCAATCTGTAGATGGTAAGTTCACGGATATTTCAAGTCAGATAACTACTTATAAGCAAGATGTGGGCGGTCAAATCAGTGGTCTATCAAATAGACTTACAAGCAGTGAGCAAGGAACCACTACTCAGATTTCAAATCTTTCAAATCGGATAAACAGTAATAAGCAAGGCACAGATAATCAGATTTCAAATTTAAAGACTCAGGTCGCTACAAACAAGGATAATGCTGAACGACAAATGGGTAGAATATCTGATCAGGTTTCTGCAAACAAAGCGAATGCTGATCGTCAATTTGCGAATGTGACCAATCAACTAGTGCGAAAAGTAGAGACTACTGACTTCCAGCGTGTTAAGGAAACCAGTAAACTTTACGAGCGGATTTTGGGCAATACTGAAAATGGAATTGCGGATAAGGTTGCTCGCATGGCTCTGACCAATCAACTGTTTCAGGTTGAGGTTGGGAAATATAGTGTAAGCGGCCCTAACCTCATTAAGAATAGTGATTTTAAAAATGGTACGAATGAATGGGGCTCAACTCAAAATTTAGGAAGATTGGTTAAGCATAGCTTTTATCACAACGGGCAGAAAGACCTTATGCGTTTAAGTAATGCAACTAAAAACGAAAACTTTTTGTATAGTCACCGTTTTAATCTTGAACGAAATACTGACTATGTACTGAATTTTAGAGGATTTAACAACAGTGCTCTAGCAAGCTATGATGTTTATATTTTGGGACGAAGAGCAGGCGAGAGCGATGGATTCACAATCGTTAAGAAAGTTGTTAGCAGCAAGAAACTATCTACCTCTAGATGCGAAGATGTCTCAGTAACTTTTAATTCCGGAGAAATGGATAATGCTTACATTCGTTTTGATAACAATGGCTCATCATCAGGAACAGCTGATTTGTATATTACAGAAGTTGACTTGTACAAAGGTTATAAACCTAGAACATGGCAACCACATCCAGAAGATGCAGTCGCAGATGCGAATAAGAAGCTTGAAGCAACGCAAACAAAAATGACTCAACTAGCTGGCTCATGGGCAGTTCAAAACATCAACTCGGCTGGAGATATCATCTCTGGAATCAATCTTGGCGCCAATGGACATAACCGCTTTGTTGGGAAATTGACCCACATCACTGGAGAGACCCTGATTGACAGAGCAGTCATCAAGTCTGCCATGGTTGATAAGCTCAAAACGGCCAATTTTGAAGCTGGTTCGGTCACGACTACGATATTAGAAGCTGAAGCGGTAACTGCTGAGAAGTTGAAAGTTGACAATGCGCTTATTAAAAAATTAACTGCAACTGATGCTTTTATTGACGAACTGATATCTAAACGTATCTTCTCTATTAAGGTTGAGTCCGTCATTTCTAGTTCAACCTTCCTAGAAGCCTATCAAGGTCGAATTGGTGGATTCACACTTGGTCAATTTGACCAGGGTGGCGGTCGCTGGATTTCAGGTGTCAATCAGTTCTCTGTTGGTATGGGGAATGGTGCCGGGTATGGAGTCCGGACAGCCTTCTGGGCGAACTGGGGAAATAATTGGAACTATGCCGGACCTAAAGCATGGAACGTCAATACTGATGGGAAAATGTACTGTAGGAATGAAGTCGGTTTTTATGATCAAGTGGATTTTTCGAATTCATCGAGAGCAAACTTTTATGGGAATACTACTTTTTCTCGTTCTCCTGTGTTTTCAAATGGTATCGAACTTGGAAGTAAAGATGTGCTTGGTGATGGCTGGAATCCCAAAGGAGGAAGGAATGCGGTTGTTTGGTGGAATCAGATCGGTAGCGGTAGCGTGAAGTATTGGATGGAACAAAAATCAGACAGACGCTTAAAAGAGAACATCACAGATACAGCTGTGAAAGCCTTGGATAAAATCAACAGATTAAGAATGGTTGCATTTGATTTCATCGAAAATAAGAAACATGAGGAGATTGGTCTAATAGCTCAAGAGGCTGAAACCATCGTTCCAAGAATTGTCTCACGAGATCCTGAGAATCCAGATGGCTATCTGCATATTGACTATACCGCTTTAGTTCCTTACTTAATCAAGGCTATTCAAGAATTAAATCAAAAAATAGAAAAAATGGAGAAAACAATAGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
374df9db1251a9fe80ca08f01681d537402ebd8d0b0f258c7434de9067309099
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5892
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Variable recombination dynamics during the emergence, transmission and 'disarming' of a multidrug-resistant pneumococcal clone Croucher,N.J., Hanage,W.P., Harris,S.R., McGee,L., van der Linden,M., de Lencastre,H., Sa-Leao,R., Song,J.H., Ko,K.S., Beall,B., Klugman,K.P., Parkhill,J., Tomasz,A., Kristinsson,K.G. and Bentley,S.D. 2014 24957517 GenBank