Protein

View in Explore
Genbank accession
GENB_32dc0bd90076 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALTQLVQARHPVLGLDYVDVRDYGAKGDGVNDDCLAIQTAIRDAHAKGITRVFVPGTDQYYRCTYPVFLLSGIELFGVGPGSRIVFENPVFSKGRGAIVIGSSYEINRTLVFAAYDSGSWEGKSTINTSYVNPAQKQYIRDNPSFIECKNASVHDLRLDAIYLSPYTDGGYGINFVNSQDCVAYNIAGSGWSQLIGMGSDTPPETPSNHRCKAWNLEVVQPNQSKTYYSIGFISNSTNCVIHDAVQHQPMADGTPNGSAGAFNLCEDCEMYNITVHELGRTQSSEGVLMNNLVGCRVEGITIKGTPTSKVISAVSHYYTDASFNVASRPNVFKNITAVNCEHAVSLRGKYVIVDAVSPYNCDYDLYFGNNNATNNQVMFEPKSVRFGGSNTHAWFLQNNTVKGWQRRYHYLRPAAMLLNAKGDTQSWNNNKLVSTKRDVSLYFQHALGEEFKAIDDMRCYLRFNNAADAAYLKGSTVQMSLRQMLAFDGNIGEVPYTALTNTRVAASGMEDTNLVATAAGTTGLVRMDDATNGLAYSWTLDVSMTNNTDFNYMKELRVAGYK
Physico‐chemical
properties
protein length:563 AA
molecular weight: 62013,83170 Da
isoelectric point:6,18945
aromaticity:0,10480
hydropathy:-0,27691

Domains

Domains [InterPro]
IPR011050
STR
17–421
IPR011050
DC_0117
RBD
412–563
DC_0117
GENB_32dc0bd90076
1 563
Architecture
STR
RBD
STR 17-421 | RBD 422-563
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_cmc20191
[NCBI] 		2764949 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MT559526.1_CDS_[41890..43581] [NCBI]
Genbank nucleotide accession
MT559526.1 [NCBI]
CDS location
range 41890 -> 43581
strand +
CDS

  




        

        
      
    
  






  

  
  

    
Genome Context

  


  

    

      
Genome Context

      

    

  


  

  


  

  

  
  

  


  

    
Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
ef8ba58bd876fa9ff84f705c355f18ca2af74bec2ac75f4d5ab4214124a97dd4

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6941
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50