Protein
View in Explore- Genbank accession
- XQU49546.1 [GenBank]
- Protein name
- long-tail fiber protein
- RBP type
-
TFTSP
- Protein sequence
-
MAKMMASFGQGFVQTQVLSENNSVKYKLAFAAGVAQSTPSEAYYTFQDEPAGVQYDGPGINLREFNPTNNQMINFKTFNIKPEDTNAGTKAFVDHMKTLVSSDNLLIITSYDRLYSSPSVEALMKSIGSVLWPSIFLTTNYSCNYCALYSINRKKIIAENATYSDFKKEDRDIRPALEFIYDKPSDIGATGYSQKAIDDPETYIINKDNTSKRFPQQFEQISPISEYGISPGDKMQWNFEVKGDASLNAPGQNIRVNLRWFKGSSYLSGAVVETNPLDADKWAWHQRYVTVPDTADGFTIIASRYPEVAGSEGSGAIREMMLTQVSRLVEPLMDPAGFGVNGIRMNNMISDGVNENTLLVLPDTEDDKSGNIYSADFREYND
- Physico‐chemical
properties -
protein length: 382 AA molecular weight: 42624,18060 Da isoelectric point: 4,78905 aromaticity: 0,10995 hydropathy: -0,43508
Domains
Domains [InterPro]
No domain annotations available.
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
382
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 140 | 140 | 0,4711 |
| Central domain | 141 | 371 | 232 | 0,4417 |
| C-terminal | 372 | 382 | 10 | 0,2708 |
Note: Constraints were applied during segmentation.
Fixed 72 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 72 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-140
1-140
Central
141-371
141-371
C-terminal
372-382
372-382
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
XQU49546.1
[NCBI]
Genbank nucleotide accession
PQ898399.1
[NCBI]
CDS location
range 42417 -> 43565
strand -
strand -
CDS
ATGGCTAAAATGATGGCGAGCTTTGGACAAGGATTTGTCCAAACTCAAGTTCTCTCTGAGAACAATTCCGTCAAGTATAAGCTAGCATTCGCTGCAGGGGTAGCTCAGTCTACCCCTTCTGAAGCTTATTATACTTTCCAGGATGAACCTGCTGGTGTTCAATATGACGGTCCCGGCATAAATTTGAGAGAGTTTAATCCAACTAACAACCAAATGATTAACTTCAAGACTTTTAATATAAAGCCTGAAGATACAAATGCTGGAACAAAAGCGTTTGTCGATCATATGAAAACATTAGTATCTTCTGACAATTTGCTTATAATTACTTCATACGATAGATTATATTCAAGCCCGTCTGTTGAAGCATTAATGAAATCAATTGGCTCAGTTTTATGGCCAAGCATATTCTTAACGACCAATTATAGTTGCAATTATTGTGCATTGTATTCTATAAATCGTAAAAAGATAATTGCTGAAAATGCTACTTACTCTGATTTCAAAAAAGAAGACAGAGACATTAGGCCAGCACTTGAATTCATTTATGATAAACCTAGTGATATAGGAGCTACTGGATATTCTCAAAAAGCAATTGATGACCCTGAAACTTATATCATTAATAAAGATAATACTAGTAAAAGATTTCCACAGCAATTTGAACAAATATCTCCAATAAGCGAGTATGGAATTTCTCCTGGAGATAAAATGCAATGGAACTTTGAAGTTAAAGGTGATGCTTCTTTAAATGCTCCTGGACAAAATATTAGAGTTAACTTAAGATGGTTTAAAGGAAGCTCTTATTTATCTGGAGCTGTAGTCGAAACAAATCCTTTAGATGCAGACAAATGGGCTTGGCATCAAAGATATGTCACTGTACCAGACACTGCTGATGGATTTACTATCATAGCTTCTCGTTATCCAGAAGTAGCTGGTTCTGAAGGAAGCGGAGCCATTAGAGAAATGATGCTTACTCAAGTGTCAAGATTGGTTGAACCTCTTATGGACCCAGCCGGATTCGGTGTCAATGGTATTCGTATGAATAATATGATTTCTGATGGAGTAAATGAAAATACTCTATTAGTCCTTCCTGATACTGAAGATGATAAGTCTGGTAATATCTACTCAGCTGACTTCAGAGAGTATAATGACTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
3ae57c2c223fae98c6978b94fee150b80f8460a816f6adc2a1e232ebfbc77e69
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50