Protein

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Genbank accession
YP_007006868.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MDLLVIRDLATDNETLGKLYIDGKFFCYTLEDVSRPVKLYGDTCIPYDDNYKVKTTNSPRFGRPLPLVWNNSKDESVTNRNGDRWSGIRFHGGNHHMHTLGCLLVAKNRYDNKPTKFDYKGKTYTFDNWIQGSMIDPLVAKLGKNTSNMKIVLSDSFKDLRTINTDKINFSFKVNELDNSDTLKIKNALIKHGYPIEDSKFDWVMQEYVYMFQKANGINPNGIVNKETMTALGLLWDDYELVEPIDHLKIK
Physico‐chemical
properties
protein length:251 AA
molecular weight: 28993,71080 Da
isoelectric point:7,67056
aromaticity:0,11155
hydropathy:-0,55697

Domains

Domains [InterPro]
IPR043732
STR
5–114
IPR043732 IPR036366
IPR043732
STR
5–125
IPR043732 IPR036365
IPR002477
CBM
180–232
IPR002477
IPR036365
RBD
185–233
IPR036365
YP_007006868.1
1 251
Architecture
STR
ATT
STR 5-125 | ATT 177-234 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Sphingomonas phage PAU
[NCBI] 		1150991 No lineage information
Host Sphingomonas paucimobilis
[NCBI] 		13689 Bacteria > Proteobacteria > Alphaproteobacteria > Sphingomonadales > Sphingomonadaceae > Sphingomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007006868.1 [NCBI]
Genbank nucleotide accession
NC_019521.1 [NCBI]
CDS location
range 185437 -> 186192
strand +
CDS
ATGGATTTATTAGTAATAAGAGATTTAGCTACAGATAACGAAACATTAGGTAAACTATATATCGATGGTAAGTTTTTCTGTTATACATTGGAAGACGTTTCAAGACCTGTAAAATTGTACGGTGATACTTGTATTCCTTATGACGATAACTATAAAGTTAAGACTACTAATTCACCTAGATTCGGTAGACCTTTACCTTTAGTTTGGAATAACTCTAAAGACGAATCCGTAACTAATAGAAATGGTGACAGATGGTCGGGTATTCGTTTCCATGGTGGTAATCATCATATGCATACTTTAGGATGTTTATTAGTAGCTAAGAATAGATACGATAATAAACCTACGAAATTCGATTACAAAGGAAAGACTTATACTTTCGATAATTGGATTCAAGGTAGTATGATTGATCCGTTAGTTGCAAAACTTGGAAAGAATACTTCGAATATGAAGATAGTTTTATCAGATAGTTTCAAAGATTTAAGAACTATCAATACTGATAAAATCAATTTCAGTTTTAAAGTAAACGAATTAGATAATTCAGATACTTTAAAAATTAAGAACGCTTTGATTAAACATGGATATCCAATTGAAGATAGTAAGTTCGATTGGGTTATGCAAGAATACGTATACATGTTTCAGAAAGCTAATGGAATAAATCCAAACGGTATCGTTAACAAAGAAACTATGACAGCTTTAGGTCTGTTATGGGATGATTACGAATTAGTTGAACCAATCGATCATTTAAAAATCAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4ca0fa64031c001da908a6d7b6024b5c969d2fa0de990ab882fd036a28ba37c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7593
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50