Protein

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Genbank accession
AXC39838.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGVNDADKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFTNGETVNFGGKTLTIDCKAKFIGDGNLVFTQLGKGSIVIAPFMESATTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKDQNISSVLEIRECTGVEVHRASGLMACFLFRGCNFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFARDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPYSQYPVHMLPLNHLIDNLLVRGSLGVGLGMDGQGLYVSNITVEDCAGSGAYLLTHETVFTNIAIIDTNTKDFPANQIYISGACRVNGLRLVGIRSTSGQGVTIDAPNSTVSGITGLVDPSRINVANLAEEGLGNSRINSFNNDSAALRLRIHKLSKTLDSAAVYSHINGGPGSGSAWTEVTAIAGSLPDAVSLKINRGDYRAVEIPVAVTVLPDNAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72699,44390 Da
isoelectric point:4,96826
aromaticity:0,08480
hydropathy:-0,15029

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
71–132
IPR040775 IPR012332
IPR015331
RBD
138–684
IPR015331
AXC39838.1
1 684
Architecture
ATT
STR
ATT 65-135 | STR 136-684
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC39838.1
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9935
Central domain 155 601 448 0,9901
C-terminal 602 684 82 0,8547
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-601
C-terminal
602-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S106
[NCBI] 		2231339 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC39838.1 [NCBI]
Genbank nucleotide accession
MH370363.1 [NCBI]
CDS location
range 23816 -> 25870
strand +
CDS
ATGTCTAGTGGTTGCGGTGATGTATTGTCACTTAACGATTTACAAATAGCCAAGAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGTGGTGTAGCTGGCGGCGCAGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACCCTGCCCGCTGTTTTACGCGATGCTGGTTTCTCCCCGGCGTCTTTTAATTTTACGACCGGGGGTACTCTCGGCGTAAACGACGCAGATAAAGCTGTTCTTTGGCCGAAAGAAGATGGTGGAGACGGTAACTACTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACAGGCGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGGGATATCACCTTCCGTGCCGAAGCAGATAAGAAATTTAAATACTCCGTTAAGCTTTCCGACTTCACTACGTTACAGCAACTAGCGGATGCCGCTGTTGACAGCGTTCTTATCGACCGCGATTACACCTTTACCAATGGTGAAACTGTTAACTTCGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATTGGTGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATTGTAATAGCCCCCTTTATGGAGAGCGCTACAACGCCGTGGGTGATTAAACCGTGGACCGACGATAATCAGTGGATAACCGACCCCGCGGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTACGCCAAGTTTCCTGGAATAGAATCACTCCTCCCCCCGGAAGCTAAAGACCAAAACATTTCGTCTGTCCTTGAGATACGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGCGGGTGCAATTTCTGTAAGATGGTAGACGCCGATAACCCAAGCGGCGGGAAGGACGGCGTAATCACCTTCGAAAATTTAAGCGGCGATTGGGGTAAGGGGAACTATGTTATTGGTGGCCGCACGAGTTACGGCTCAGTAAGTAGCGCGCAATTTTTACGTAACAATGGTGGTTTCGCGCGAGATGGTGGGGTCATAGGATTTACCTCGTATCGCGCAGGGGAAAGTGGTGTTAAAACATGGCAAGGTACGGTAGGTTCTACGACCTCTCGTAACTACAACCTGCAATTCCGGGATTCTGCGGTACTATACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACATGAACCCAGAAGATGACCGCCCGGGGGATTTCCCATATTCCCAATACCCGGTACATATGCTCCCTCTAAACCATTTAATTGACAATCTACTGGTTAGGGGTTCTTTGGGGGTAGGTTTAGGCATGGACGGGCAGGGCCTATATGTTTCAAATATAACTGTAGAGGATTGTGCAGGTTCGGGTGCGTATCTTCTTACTCACGAAACGGTATTCACTAATATTGCTATAATCGACACAAATACTAAAGATTTTCCAGCGAATCAGATATACATCTCCGGGGCCTGCCGTGTAAATGGCCTTCGTTTGGTAGGTATACGCTCTACTAGTGGGCAGGGGGTGACGATAGACGCTCCTAACTCCACTGTAAGCGGTATAACCGGTCTCGTTGACCCATCAAGAATCAATGTGGCCAATTTAGCGGAGGAAGGTCTAGGAAACTCACGAATTAATAGTTTTAATAACGATTCTGCGGCGCTGCGGTTACGGATACATAAACTGTCAAAAACTTTAGATAGCGCTGCTGTGTATTCGCACATAAACGGCGGCCCTGGTTCGGGTTCCGCGTGGACAGAAGTCACGGCTATTGCGGGGAGCTTGCCCGATGCCGTGTCATTAAAAATAAATAGGGGCGATTATCGTGCTGTTGAGATACCGGTAGCGGTGACCGTCCTACCAGACAACGCTGTCAGGGATAACGGGTCTATATCACTGTATCTGGAGGGCGATAGCCTTAAAGCGTTAGTTAAGCGGGCCGACGGAAGCTATACAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8e48a0bd02c33bfeb5501b0c0d1164b1bd1130f70c2a496036d26525e19d709
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6899
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50