Protein

View in Explore
Genbank accession
AUE23433.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,74
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MADTTQFEQAVDQVIEDSERLHKVVNGSAIDTVIVEDGSTIPTLRKALLDNVYFKTPPQPWAAGTQATVFNQLYSFTSSAGTFWWYAPGASPSTPVTLPADPSTSTAWKVYNDSVVVSEKYAPLNTPAFVGSPTAPTPAQGSNSGAIATTAFVNLAVAAAINSLTGSSPNYAALTVVGASTLNTLVVSGTSQFGGTIDASGVLGKFQKISLSGQTATLSFDYTAASNYLKTIISPNSVQTNNLTSAIIVNGTASADNTTMSLTGVGNNTFDYVYIRGNSSKASTEPRLKVTGTTELENVRVTGSLSGVNVGVDGLDILPNSIVTTTTAR
Physico‐chemical
properties
protein length:329 AA
molecular weight: 34101,48020 Da
isoelectric point:4,74972
aromaticity:0,07599
hydropathy:0,02644

Domains

Domains [InterPro]
DC_0194
STR
1–329
DC_0194
IPR058969
ATT
5–111
IPR058969 IPR026017
AUE23433.1
1 329
Architecture
ATT
STR
ATT 1-111 | STR 112-329
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Raoultella phage Ro1
[NCBI] 		2053702 Uroviricota > Caudoviricetes > Vequintavirinae > Mydovirus Ro1 >
Host Raoultella ornithinolytica
[NCBI] 		54291 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUE23433.1 [NCBI]
Genbank nucleotide accession
MG250486.1 [NCBI]
CDS location
range 120773 -> 121762
strand +
CDS
ATGGCTGATACAACACAATTTGAACAGGCTGTGGATCAGGTTATCGAGGATTCTGAGCGTCTCCATAAGGTGGTCAACGGATCGGCGATCGATACTGTTATTGTAGAAGATGGTAGCACTATTCCGACATTGCGTAAAGCACTTCTCGATAATGTGTATTTTAAAACACCACCGCAACCTTGGGCTGCGGGGACACAGGCAACAGTTTTTAACCAACTGTATTCATTTACGTCTTCAGCCGGAACATTCTGGTGGTATGCCCCTGGTGCGTCACCATCCACACCTGTGACCTTACCTGCGGACCCATCTACAAGTACCGCCTGGAAAGTTTACAATGACTCCGTTGTGGTTTCTGAAAAATATGCACCTCTAAACACCCCTGCATTTGTCGGTTCTCCGACAGCGCCTACTCCGGCTCAGGGAAGTAATAGTGGTGCGATAGCGACAACTGCATTTGTCAACTTAGCTGTCGCAGCAGCAATCAACTCCCTTACGGGGTCTTCTCCAAATTATGCTGCTCTTACGGTAGTTGGTGCTTCAACCCTTAACACATTGGTTGTTTCGGGGACATCACAATTTGGTGGGACGATTGATGCCTCTGGTGTACTTGGTAAATTCCAGAAAATTTCGTTATCTGGACAAACTGCCACGCTTTCTTTTGATTACACCGCTGCATCCAACTATCTGAAGACTATCATATCCCCGAACTCTGTTCAAACCAACAATCTGACTTCCGCAATTATTGTGAATGGGACAGCTAGTGCAGACAACACCACAATGTCATTAACTGGTGTCGGTAATAACACCTTTGACTATGTGTACATCCGAGGGAACTCTTCCAAGGCCTCTACGGAACCAAGGCTTAAGGTAACCGGAACGACAGAGCTTGAAAACGTAAGAGTAACAGGTTCGTTGTCCGGTGTCAACGTCGGTGTTGATGGCTTAGATATTCTTCCCAACTCCATTGTCACAACGACAACAGCGAGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8834f2ab29b6962d39ce4c212365526a53e12504ce32d7bb86565db5388ff91c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6611
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Antibacterial composition for extension of chilled fish shelf life and decreasing of risk of food-borne infections, bacteriophage strains for its preparation Zulkarneev,E.R., Aleshkin,A.V., Rubalsky,O.V., Kiseleva,I.A., Rubalskii,E.O. and Lebedev,S.N. 2019-10 — GenBank