Protein

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Genbank accession
YP_010676027.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MKILASNNASTVLAAGISASATSLTVATGSGSTFPTPVSGTSYFKLTLIDAATESINEIVHVTAVSGDTFTIVRGQEGTSARIWSVNDIASNMITAGTISAMAQYDTAEFLAATSGRLVNVQFFAASAPYTPTAGATWAIVEIVGASGGSGGVPTVPTGQSVCTSPSSQGTYVKAIVRNLSNQQITIGQPGTGQGSVNIATSGGQSSFGNLIICPGGGGSYPAQPTAGGITPSVGTPSGPPTIANGIQVIGSIYNQIAQNAIQSTFGVATNWRVAWPGPFPGFNYGRSTDGVYLGQNNPAYAGNTGYGGACRIWEYA
Physico‐chemical
properties
protein length:317 AA
molecular weight: 31897,07330 Da
isoelectric point:5,72666
aromaticity:0,08202
hydropathy:0,12240

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage PdC23
[NCBI] 		2894356 Uroviricota > Caudoviricetes > Felixviridae > Certevirus C23 >
Host Pantoea dispersa
[NCBI] 		59814 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010676027.1 [NCBI]
Genbank nucleotide accession
NC_071008 [NCBI]
CDS location
range 19093 -> 20046
strand +
CDS
ATGAAAATTTTAGCATCCAATAATGCCAGCACCGTGCTTGCTGCGGGTATCAGCGCGTCAGCAACCTCATTGACGGTGGCCACCGGATCAGGTTCGACCTTCCCAACCCCTGTCAGCGGAACAAGTTATTTCAAACTGACATTAATTGACGCCGCGACCGAGTCAATTAACGAGATCGTTCACGTAACGGCAGTATCTGGCGACACCTTCACAATCGTTCGTGGTCAGGAAGGAACCAGCGCCCGCATCTGGTCGGTTAACGATATCGCCAGCAACATGATCACTGCCGGCACTATTAGCGCCATGGCACAGTATGACACTGCGGAATTTCTGGCAGCCACGTCCGGAAGACTGGTTAACGTTCAGTTTTTTGCGGCCAGTGCCCCTTATACGCCAACAGCAGGTGCGACATGGGCGATAGTTGAAATAGTAGGTGCCAGCGGTGGTAGCGGTGGGGTTCCTACGGTACCAACAGGACAAAGCGTGTGTACATCGCCATCTTCACAAGGGACCTACGTTAAAGCCATCGTGCGTAATTTATCAAACCAACAGATAACCATTGGCCAACCTGGAACTGGGCAGGGATCGGTTAACATCGCCACTTCAGGCGGCCAAAGTTCCTTTGGTAATCTGATAATTTGCCCAGGTGGCGGTGGTAGTTATCCGGCGCAGCCAACCGCCGGCGGAATTACACCTTCCGTAGGTACGCCAAGTGGGCCTCCTACGATCGCCAATGGTATTCAGGTTATTGGGAGCATATATAATCAGATCGCCCAAAATGCCATCCAGTCAACATTTGGGGTGGCCACTAACTGGAGAGTTGCGTGGCCAGGACCTTTCCCAGGGTTTAATTATGGTAGATCAACCGACGGTGTGTATCTGGGACAAAATAACCCTGCATATGCAGGAAACACTGGCTACGGCGGCGCGTGCAGAATTTGGGAGTATGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
682e379076088a9fa0e435019370f2c7e0402e593278fde0b4ccc8e65ff9ff27
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8427
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, Characterization, and Comparative Genomic Analysis of vB_Pd_C23, a Novel Bacteriophage of Pantoea dispersa Grami,E., Laadouze,I., Ben Tiba,S., Hafiane,A., Sealey,K.S. and Saidi,N. 2022 36562822 GenBank