Protein

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Genbank accession
AUR88149.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MADCSSYPTKSTAETFKLDAETVNEVVTSSDDRTPPASDGLTKKTLAGIETDATNQLADIQQRADDQYSDINNQYVLRNKGDYATDPLLESYYEFADFNGLIYFPIVAPYQVDSATYPDPSNDLNLRLGQATDDSLVTSTGSTTPRTLADRFSDVVNIKDFGAVEGQNIASYLNSALAAGYTNILVKGNYLFEGGTINVVSPETKIEFDGLMTVKAGTNTRFSNPDFYDLAHTAVPSYRGMALSVSDATNVAVGDIIRITTTTVGETGWNYMRQFTSTVSSVDGTTITLSRSSTFNLNAGDITGLAVRVYKSKQVEINGLNIETESACGNADGITLSELIVTMQDVTQNNHYPSAAYTVRASYCCDSTITNIKVKGGLYPFLLAACSNITVENVTAHDCHHAIATGDFCDGVYVNNIQGTGGLLESHPSFDVHYSNFTVVTGTGNRDTEVNLRSVGGSLTNGRVTSHNLTGIAYIQNVALTDEEPYQTDCNFVMDNIIWETTQDREFQCNIEKGYEVRVTNSKFCDNLIFGGPATANDIAGGVYVHGVNATKIQVRGEVFTHDKYSLITDGTYTGSGNDYEVDIRSAGVDRFGYKVSGRLPITQGPWVDGDILNLKIYFGTEYNTSDRYCQYRLKVSTVVKHSSAGVLQYREADHLIHVKVVSASSIAVSPNSITELEPSGFASDSGTMSLGAFTFGDFTTDDRWFSVPVEISSGGRADPELHQVRYSLELINRYS
Physico‐chemical
properties
protein length:736 AA
molecular weight: 80026,39610 Da
isoelectric point:4,63644
aromaticity:0,09375
hydropathy:-0,25938

Domains

Domains [InterPro]
DC_0489
STR
1–707
DC_0489
IPR011050
STR
153–471
IPR011050
AUR88149.1
1 736
Architecture
STR
STR 1-707 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR88149.1
1 736
Domain Start End Length (AA) Confidence
N-terminal 1 169 169 0,9937
Central domain 170 589 421 0,9882
C-terminal 590 736 146 0,9899
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-169
Central
170-589
C-terminal
590-736

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.110.O._10N.261.52.C1
[NCBI] 		1881195 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR88149.1 [NCBI]
Genbank nucleotide accession
MG592483.1 [NCBI]
CDS location
range 16728 -> 18938
strand +
CDS
ATGGCTGATTGTAGTTCATATCCAACCAAATCAACGGCGGAAACATTTAAGTTAGATGCTGAAACAGTAAACGAGGTTGTTACTTCTAGTGATGATCGCACACCACCAGCGAGTGACGGATTAACTAAAAAAACGCTTGCTGGAATTGAGACAGATGCAACAAACCAACTTGCGGATATTCAACAGCGAGCAGATGATCAATACTCTGATATCAACAATCAGTATGTTCTACGCAACAAAGGCGATTACGCAACAGACCCGCTGCTAGAGTCTTACTATGAGTTTGCTGATTTTAATGGGCTAATTTACTTTCCTATTGTCGCGCCTTATCAAGTTGATAGTGCCACATATCCAGACCCATCAAATGACCTCAACTTGAGGCTTGGTCAGGCGACAGATGATAGCCTTGTTACATCAACAGGAAGTACGACCCCACGCACACTTGCAGATCGCTTTAGTGATGTTGTTAACATTAAAGATTTTGGTGCAGTAGAGGGGCAAAACATTGCAAGTTACCTAAACTCCGCTCTTGCGGCGGGTTATACCAACATTCTAGTAAAGGGTAACTACCTTTTTGAGGGTGGCACTATTAATGTGGTCTCGCCTGAGACAAAGATTGAATTTGATGGCTTGATGACCGTAAAGGCAGGAACCAACACGAGATTCTCGAACCCAGATTTTTATGATTTAGCACACACCGCAGTGCCAAGCTATAGAGGAATGGCACTTTCTGTTTCTGATGCTACAAATGTTGCAGTTGGTGACATTATACGCATAACAACAACAACGGTAGGCGAAACTGGGTGGAACTACATGAGGCAGTTTACCTCAACTGTTTCATCGGTTGATGGAACAACAATCACACTATCAAGATCTAGCACGTTCAACTTAAATGCCGGTGATATTACAGGCCTTGCCGTTAGGGTGTATAAGAGCAAGCAGGTTGAGATCAATGGATTAAACATAGAGACAGAGAGCGCGTGTGGAAACGCTGATGGAATCACCTTGTCAGAACTGATAGTAACTATGCAGGATGTTACGCAGAATAACCACTACCCATCAGCGGCATACACAGTAAGAGCATCATACTGCTGCGACAGCACAATAACCAACATTAAGGTTAAAGGCGGCTTATACCCATTTCTGTTGGCGGCTTGCTCAAATATTACTGTCGAAAACGTCACAGCGCATGACTGTCATCACGCAATTGCTACAGGTGATTTCTGTGATGGTGTTTATGTTAACAATATACAAGGGACAGGTGGCCTATTGGAGTCACACCCTAGTTTTGATGTGCACTACTCAAACTTTACTGTGGTAACAGGAACAGGGAACAGAGATACGGAGGTAAACCTAAGAAGTGTGGGCGGCTCACTAACGAACGGCAGAGTGACATCTCACAATTTAACTGGTATAGCGTACATTCAAAACGTAGCCCTTACAGATGAAGAGCCTTACCAAACTGACTGTAATTTTGTTATGGATAATATTATTTGGGAGACTACACAAGATAGAGAATTTCAGTGCAATATCGAGAAAGGCTACGAAGTCAGGGTAACAAATTCAAAGTTCTGTGATAACTTAATTTTTGGCGGGCCGGCTACGGCCAATGACATTGCTGGTGGTGTCTACGTTCACGGCGTAAATGCTACAAAAATACAAGTTCGCGGTGAGGTGTTTACGCATGATAAGTACTCTTTGATTACCGACGGCACCTATACTGGTTCTGGTAATGATTATGAGGTTGATATACGAAGTGCTGGGGTTGATAGATTCGGGTACAAAGTATCTGGTAGGCTCCCAATAACGCAAGGGCCTTGGGTTGATGGTGATATATTAAATCTTAAGATTTATTTTGGTACTGAATACAATACATCAGATCGCTATTGTCAATATAGATTAAAAGTATCAACAGTGGTCAAGCATTCCAGTGCCGGGGTGCTTCAGTACCGTGAGGCAGACCATTTAATTCACGTTAAAGTTGTATCAGCATCTAGTATAGCAGTGTCACCAAATAGTATAACAGAGCTAGAGCCGTCAGGATTTGCTAGTGATTCTGGCACAATGTCGCTCGGAGCGTTTACATTCGGAGACTTCACAACAGATGATAGGTGGTTTAGTGTGCCAGTAGAAATATCATCAGGAGGCAGAGCAGACCCAGAGTTGCATCAAGTTAGGTACTCTTTGGAGTTGATTAATAGGTATTCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6c3378a9bef7f7d8556478c1725588570c4179f08c46493ad6c3ca8e9137bdd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7054
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank