Protein

View in Explore
Genbank accession
QIW87001.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,68
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADLKLGTQIGGNLVWHQGILDLNPVDTKLYFQDQEVLVDTGYQTLKGTMKFNVPANQYDIESISVLPAGSKSMLRKFRGGNNDTIWHETVQNTKYRISTGNTDAGLILELAHGASAIFQNSVLTNAAQSTAANSFVRKDYVDAIDAKNVAKAGDTMTGDLLFDSASRKVRVNEVASVTAGWDAAGNSTFFRMGPYDQAKGGDLLEIRSAGAGVGNRTSGFDVRTTKNISNTPLYVGDHMVYHPANKPTPNDLGAYNKAEIDTKSWLRVKDERATMIQPSALDPKTMGLYFTNQSDVTSSWVSGFTVKGWEGNYAAWSLFSAARSDADDKRLWFKHGRADWMASTRIYHEDDKPTNDELNLVSRAGDEMTGPLTIRNSTFQCVTGWGVRRIMKQLGPQNDAKPVLVLFCPKYIGAALPKSGFVGRVTFDRGATTSTLQANYVDLSAVTGYTATDAQIHYASGGTPVKLVYTTHNGVEYLAMYRAAVSAATLVIDGYCYGADPILISDATSYTVTDVEVRERIYSSDNKPTNVDLNLVSRAGDTMTGSLNGPDFIQTTPQSSNGAASARKDYVDAQDAKTVAKAGDTMTGVLIATQFKASTDYGFVRSTNNAQGMFVGADGRTILGGGTGVLSIRPQGIGTPAGESVFNNDGTIAIYKTGTADNHLVTKKYVDDKVGTAVQSVTATGAVKSTGGINPVISLDNATNQTDGAMSFADKAKLDGIPAAAVNRTGDTMTGRLTVPSIIDNATNLGKDALAYVTVPANQWAGPLGQARMVKPDSVGGPAGMKGGYWNILGRRDSAGGYAGIYIPYGDTDNKNYIGTNQTGTNAPIWAEIYTNLNKPTNVDLNLVSRAGDTMTGTLNAPDFIQTTAQSTSAAACTRKDYVDNLVTTLRNDVYSKSTSDARYVIKTGDTMSGNLTVPKVLLSAAQGTEANSAARKDYVDAVDAKNVAKTGDTMTGNLVVKTDIFVKDNVNVTGHQITFGDKAAGKTSGETGITTARFIELLTAMGAFKTVDWVGNVTWNYAANNVLTDTGYGNIHLAGCTVEVNGIAEYTIRLTTPTMSGTSMPGAQNNTQSEFIYNNQGASYQPKWRRQINDTMVVDNGNSWAGVVGKVPFIGSNGVMEVAKYIDFHDTNSTEDFTTRLAVGGSKQLQIFSTNGSVDIGAQNSSYAHIYTDRPKFAFNKPITQLNDGYLTINNSSPTVLLQDLDNHSSFLHTNSGIFYILRSAGANGDTFDAGPNGIHPMTMNLANGDVQFSRNGSFNDVQIRSDRRLKSNFLPIVSAVEKVGMLSGFTFDKIGCDKREAGIIAQDLQKVLPESVGTFKNTAGNEYLTVSNSGVNALLVEAIKELTDRVKYLESKLN
Physico‐chemical
properties
protein length:1361 AA
molecular weight: 145875,19450 Da
isoelectric point:6,08486
aromaticity:0,08156
hydropathy:-0,30022

Domains

Domains [InterPro]
DC_0459
ATT
1–563
DC_0459 IPR030392
DC_0933
STR
425–1348
DC_0933
IPR030392
CHP
1268–1360
IPR030392
QIW87001.1
1 1361
Architecture
ATT
STR
CHP
ATT 1-563 | STR 564-1348 | CHP 1349-1360 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIW87001.1
1 1361
Domain Start End Length (AA) Confidence
N-terminal 1 364 364 0,0775
Central domain 365 563 200 0,3761
C-terminal 564 1361 797 0,6577
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-364
Central
365-563
C-terminal
564-1361

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Ahp1_CNU-2021
[NCBI] 		2814919 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIW87001.1 [NCBI]
Genbank nucleotide accession
MT161459.1 [NCBI]
CDS location
range 105347 -> 109432
strand -
CDS
ATGGCTGACCTAAAATTAGGTACGCAGATTGGTGGTAACTTGGTATGGCACCAAGGGATCTTGGACCTAAACCCAGTTGACACCAAGCTGTACTTTCAAGATCAAGAGGTGCTAGTCGATACTGGTTATCAGACTCTCAAGGGCACCATGAAGTTCAATGTCCCAGCTAACCAATACGATATCGAAAGTATCTCTGTATTGCCAGCTGGCTCCAAGAGTATGCTGAGAAAATTCCGCGGCGGTAATAATGATACGATTTGGCACGAAACAGTCCAGAATACGAAATATCGGATCTCGACTGGGAATACCGATGCTGGGTTGATTCTGGAACTCGCTCATGGTGCATCAGCAATCTTCCAAAACTCTGTATTGACCAACGCTGCTCAATCGACAGCTGCAAACAGCTTTGTTCGTAAAGACTACGTGGATGCTATCGATGCTAAGAACGTGGCCAAAGCTGGCGATACTATGACTGGCGATCTGTTGTTCGACTCAGCGTCAAGAAAGGTTCGTGTAAACGAAGTGGCAAGCGTTACCGCTGGGTGGGACGCAGCAGGCAATTCTACCTTTTTCAGAATGGGGCCGTATGATCAAGCGAAGGGTGGAGATCTGCTTGAAATCAGATCTGCTGGTGCCGGAGTTGGAAATAGAACATCGGGGTTTGATGTTAGAACGACCAAGAACATTTCGAATACGCCACTATACGTTGGCGACCACATGGTGTATCACCCAGCAAACAAGCCAACGCCAAACGACCTAGGCGCTTATAACAAGGCTGAGATTGATACCAAGAGTTGGTTGCGCGTCAAGGACGAGCGAGCTACAATGATTCAGCCAAGTGCGTTGGATCCAAAAACGATGGGATTGTACTTCACTAACCAGAGTGATGTTACGAGTAGTTGGGTGTCTGGGTTCACGGTCAAGGGGTGGGAAGGCAACTACGCAGCGTGGTCTCTATTCTCTGCTGCGCGTTCCGACGCCGACGACAAGAGATTGTGGTTCAAACACGGTCGTGCAGATTGGATGGCATCTACTCGCATCTACCACGAAGATGATAAGCCGACTAATGACGAGCTGAATCTGGTTTCTCGCGCTGGCGATGAAATGACTGGACCTCTGACCATTCGGAATAGCACCTTCCAGTGCGTGACTGGATGGGGCGTTCGTCGCATCATGAAGCAATTGGGACCGCAAAATGATGCGAAGCCTGTGCTGGTTCTATTCTGTCCGAAATACATCGGCGCTGCTCTGCCTAAGAGTGGATTTGTTGGTCGTGTAACGTTCGATCGCGGTGCAACGACATCAACTCTCCAAGCAAACTACGTCGACTTATCTGCTGTGACTGGATACACAGCGACCGATGCTCAGATCCACTACGCATCTGGCGGCACTCCGGTCAAACTGGTATACACGACTCACAATGGAGTCGAATATCTGGCGATGTATCGCGCGGCAGTTTCTGCAGCAACTCTGGTCATCGACGGATACTGTTACGGCGCAGATCCAATCCTGATTTCCGACGCAACTAGCTACACAGTCACCGATGTCGAAGTTAGGGAGCGGATTTACAGCTCCGACAACAAACCAACAAACGTCGATCTGAACTTGGTGTCCAGAGCTGGCGATACCATGACCGGATCATTGAACGGTCCAGACTTCATCCAGACCACTCCGCAGTCTAGTAACGGTGCAGCTAGCGCTCGTAAGGACTACGTCGACGCTCAGGATGCGAAGACTGTAGCAAAAGCTGGTGACACTATGACTGGTGTACTGATCGCTACTCAGTTCAAGGCATCCACCGACTACGGATTTGTGCGTTCGACGAACAATGCTCAGGGTATGTTTGTAGGGGCTGATGGGCGTACTATACTTGGTGGCGGTACTGGAGTATTGTCAATAAGACCTCAGGGTATTGGCACTCCAGCAGGCGAAAGCGTGTTCAACAACGATGGCACGATCGCGATCTACAAAACTGGTACGGCCGATAATCACCTGGTTACCAAGAAGTATGTGGATGACAAAGTCGGAACTGCTGTTCAGTCCGTAACTGCAACTGGAGCAGTCAAGAGCACTGGCGGTATCAATCCAGTCATTAGCTTGGATAACGCTACCAACCAGACTGACGGCGCAATGAGCTTTGCTGATAAGGCTAAGCTGGACGGCATTCCTGCTGCTGCAGTCAACAGAACTGGCGATACTATGACCGGTCGTCTGACCGTCCCAAGCATCATTGATAACGCTACCAACCTCGGCAAAGATGCACTGGCATACGTTACAGTCCCTGCCAACCAATGGGCTGGACCTCTGGGCCAAGCTCGAATGGTTAAGCCAGACTCCGTTGGCGGTCCAGCTGGAATGAAGGGCGGTTATTGGAATATTCTAGGTCGTCGGGATAGTGCAGGCGGATACGCAGGGATCTATATTCCGTATGGTGATACTGATAACAAGAACTACATCGGCACAAACCAAACCGGAACGAACGCTCCTATCTGGGCAGAAATCTACACCAACCTGAACAAGCCAACGAACGTTGATCTGAACTTGGTGTCCAGAGCTGGCGACACAATGACTGGTACATTGAACGCTCCAGATTTCATCCAGACCACAGCTCAATCCACGAGCGCTGCTGCATGTACTCGCAAAGACTACGTCGATAACCTAGTTACTACTCTTCGAAATGATGTATATTCCAAATCGACGAGCGATGCAAGATACGTCATTAAAACCGGTGACACTATGTCCGGTAACTTGACTGTACCGAAAGTCCTACTATCGGCAGCCCAAGGAACTGAGGCTAACTCGGCAGCTCGTAAAGATTACGTCGATGCGGTAGATGCGAAGAATGTGGCCAAAACTGGTGACACGATGACCGGTAACCTCGTAGTCAAGACCGATATCTTCGTTAAGGACAACGTCAACGTTACCGGTCATCAGATCACATTCGGTGACAAAGCTGCAGGTAAGACCTCGGGAGAAACGGGAATCACGACTGCTCGATTCATCGAGCTGTTGACTGCTATGGGTGCATTCAAGACTGTCGATTGGGTTGGCAATGTAACGTGGAACTACGCTGCCAATAACGTATTGACCGATACTGGATACGGCAACATTCACTTGGCTGGATGTACCGTTGAGGTGAATGGAATTGCCGAATATACGATCCGTCTGACCACGCCAACGATGTCCGGAACCTCCATGCCTGGGGCTCAGAACAACACACAAAGTGAGTTTATCTACAACAACCAAGGTGCGTCATATCAACCAAAGTGGAGACGTCAGATCAATGACACTATGGTGGTTGATAACGGCAACTCTTGGGCAGGAGTAGTTGGGAAGGTTCCATTCATTGGATCCAACGGTGTCATGGAAGTCGCGAAGTACATCGACTTCCATGACACCAATAGCACCGAGGACTTCACAACTCGTCTGGCGGTTGGCGGCAGTAAGCAGCTCCAGATTTTCAGTACCAATGGTTCTGTTGATATCGGTGCTCAGAATAGCAGCTATGCGCACATCTACACTGATAGACCGAAGTTTGCATTCAACAAGCCTATTACGCAGCTCAACGATGGTTATTTGACAATCAACAACAGCTCACCAACGGTGTTGTTGCAAGATCTGGATAACCACTCCTCATTCCTGCATACCAACAGTGGTATCTTCTACATTCTGAGATCTGCTGGCGCGAATGGGGATACGTTCGATGCTGGTCCCAACGGCATTCACCCAATGACGATGAATCTAGCCAACGGTGATGTTCAGTTCAGTCGCAATGGATCATTCAACGATGTCCAGATCAGATCGGACCGTCGATTGAAGTCCAACTTCCTGCCGATCGTGAGCGCCGTTGAGAAGGTTGGTATGCTCTCAGGATTCACGTTCGATAAGATTGGATGCGACAAACGCGAAGCTGGTATTATCGCTCAAGATCTGCAGAAGGTTCTTCCGGAATCCGTCGGGACATTCAAAAATACCGCTGGTAACGAGTACCTAACAGTTTCCAACTCCGGAGTCAACGCTCTGTTGGTGGAAGCGATCAAGGAACTAACGGACAGAGTTAAATACCTGGAATCTAAACTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
70365917aef3148a91891e0472928e987761c43005197db8cae72d338ed95baa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5313
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila lytic bacteriophage AHP-1 Nikapitiya,C., Senevirathne,A., Lee,J. and Zoysa,M.D. 2022-03-16 — GenBank