Protein

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Genbank accession
YP_009786909.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATTIKTVMTYPLDGSTTDFNIPFEYLARKFVRVTLIGVDRKELILNQDYRFATKTTISTTRALGPADGYTLIEIRRFTSATDRLVDFTDGSILRAYDLNISQVQTLHVAEEARDLTADTIGVNNDGNLDARGRRIVNLGEAKDPNDALTLGQVQKWNDSALNSANRAKQEADRATNEANRSKAEADRSAQERAASYDWANWSKKWAVQATPVEGTGESSKTYASRAGASAANALQSERNAKTSESNAKGSEINAKNSEMNAKSSETNAKASEERAIEEANKMGNWNKLAGTVDKVYAPGEDPENPDDPLGKTIWSYGLDAPVLRAYQGASIGAKWDGKDTGPFINWYRGKGELAGTLRVHSDKGLLVQGFPHMTVDGQVHGAYIHSRGDVKADGAVWAEGDVFGRGDTLGLQRDSRWHISFQTTDGKSRMLIWKDPNSDLRINNGVEGGGDYVFDRGGGFRAPQAVYAGNAILHADGNVSGPIWAGGLLHTHISNIQNFLTDEVNHRIHEMRRGGVQEHNSGGAGDWEAPWGYFTGYRNRTGDGNIKFTTWMCRQPQAYSITRGWFDIGGNA
Physico‐chemical
properties
protein length:573 AA
molecular weight: 62719,40200 Da
isoelectric point:6,11038
aromaticity:0,08551
hydropathy:-0,65620

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 Coil
DC_0657
STR
1–573
DC_0657
YP_009786909.1
1 573
Architecture
ATT
STR
ATT 1-131 | STR 132-573
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage SM9-3Y
[NCBI] 		1897434 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teetrevirus
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009786909.1 [NCBI]
Genbank nucleotide accession
NC_047774.1 [NCBI]
CDS location
range 16519 -> 18240
strand +
CDS
ATGGCTACAACTATTAAGACCGTGATGACTTACCCGCTGGATGGCTCCACTACGGACTTTAATATTCCGTTCGAGTATCTGGCTCGTAAGTTCGTCCGAGTGACCCTTATCGGTGTTGACCGAAAGGAACTCATCTTGAATCAAGACTATCGTTTTGCGACTAAGACCACAATCTCCACAACGAGAGCATTGGGGCCAGCGGACGGATATACTTTGATTGAAATCAGGCGATTCACCTCCGCTACAGATCGTCTGGTTGACTTTACCGACGGCTCTATCCTGCGGGCATATGATTTGAACATATCTCAGGTTCAGACCCTTCACGTTGCTGAGGAAGCCCGTGACCTTACCGCTGATACAATTGGCGTTAACAATGATGGGAACTTGGATGCTCGTGGTCGTCGTATCGTCAACCTTGGGGAAGCTAAAGACCCGAACGATGCGCTGACTTTGGGTCAGGTTCAGAAGTGGAACGACTCAGCGTTGAACTCTGCGAACCGTGCGAAACAGGAAGCCGACCGTGCAACCAACGAGGCAAACCGCTCGAAAGCGGAAGCAGACCGTTCGGCGCAGGAGCGAGCAGCGTCATATGATTGGGCCAACTGGTCTAAGAAGTGGGCCGTTCAGGCTACTCCCGTTGAGGGCACTGGTGAGTCCTCCAAGACTTATGCTTCCCGCGCTGGTGCTTCCGCAGCGAATGCGCTACAATCCGAACGTAATGCCAAGACTTCTGAGAGCAACGCGAAGGGTTCCGAAATCAACGCTAAGAACTCCGAGATGAACGCTAAGTCCTCTGAGACAAATGCAAAGGCTTCTGAGGAACGAGCCATTGAAGAAGCCAATAAGATGGGGAACTGGAACAAGCTCGCAGGAACCGTCGATAAGGTATACGCTCCGGGCGAAGACCCTGAGAACCCTGACGACCCACTAGGTAAAACCATCTGGAGCTACGGTCTGGATGCTCCCGTTCTTCGTGCCTATCAAGGTGCGAGTATCGGAGCTAAATGGGATGGTAAGGACACCGGCCCGTTCATTAACTGGTATCGTGGTAAGGGTGAGCTTGCCGGGACGCTTCGAGTTCATTCGGATAAGGGTCTATTGGTTCAGGGATTCCCACACATGACAGTGGATGGACAGGTTCATGGCGCATATATTCATTCCCGTGGTGATGTTAAGGCCGATGGTGCTGTATGGGCTGAGGGTGATGTTTTCGGTCGAGGTGATACCCTAGGGCTTCAACGCGACTCACGCTGGCACATCTCATTCCAAACCACTGATGGTAAGTCACGCATGTTAATCTGGAAAGACCCTAACAGCGACCTGCGAATCAACAACGGTGTAGAGGGTGGTGGTGATTACGTTTTTGACCGTGGTGGTGGCTTCCGTGCTCCACAGGCTGTGTATGCAGGTAACGCTATCCTCCATGCCGACGGTAACGTTAGTGGGCCAATATGGGCTGGTGGTCTTCTACACACCCACATCAGCAACATTCAGAACTTCCTAACTGATGAGGTTAACCATCGTATCCACGAGATGCGTCGAGGTGGTGTTCAAGAGCATAACTCTGGCGGTGCTGGCGATTGGGAAGCCCCTTGGGGATACTTCACGGGATACCGCAACCGCACTGGTGACGGTAACATTAAGTTCACTACTTGGATGTGCCGACAGCCACAAGCATATTCCATCACTCGTGGTTGGTTTGACATTGGTGGTAACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0103ff4a8420527980da9fbb3fc41e35fcdf660613bd071b954617c15830e6c7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6803
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Preliminary research on isolation and biological characteristics of a lytic bacteriophage against Serratia marcescens Sun,Y., Hao,Y., Shi,H., Li,J. and Huang,H. 2018-01-04 — GenBank