Protein

View in Explore
Genbank accession
YP_010090962.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,52
TF
Evidence RBPdetect2
Probability 0,73
Protein sequence
MADILKPAFRATSGLDAGGDKVINVAKADFDVLSDGVNVDFFIEENTIQEYIETRAYRQNFAVMFDGRIWTAKADIASPSGPFQEARWTALRTDPKWKYVTSGANNALNSGDTISVTTELGDVGFILPNDPQDGDTIVIKDVGAKVGYNSLKVKVSNQQIVNLGNKVNELLITKPRSENVFIFSNRLWYFYAAEESIHATQITVANNEYRASASERIFRTHSAPGAIIVVLPKYANNGDIIYFTDLDGLAPLQHLIVKTFDNTSSIGKAGQYQIESRTSADGLVIYDASTKVWKIWDGDIRQRLRIIRDDVNLLANESVMVFGVNNSVQKTINIKLPAGVAIGDKERIAMNYMRKGQKVIITAATGDKIATSKTLLQFPKRSQYPPDVEWVKVDSLEFDGTIDYVPIMELSYVEDGAEKYWVVSTNDPTVERVDATSDANRQRLGVIALASQAQANANHEQTPEKELAITPETLANRTATETRRGIARVATTAEVNKLTTDTYADDTIITPRKLNERSATETRRGLAEIATQPETNAGTDDTVIITPKKLEARRATETMAGIAPLVVSGGIPGIDRDTVGTGIYERTEHTRQVTPKTLFENKATQTAQGGVWMATGNETIAGVVDTPAMPLAVSPEQLHKKTATETRIGFTEIATQPETDAGTDDFRFITPKKLNNRNATETLTGISRVATQVEFDAGTLDNVISTPLKIKTRFNDTARTSVIPASGLTESGTLWNHYTLDIREASETQRGTARLATQLEVNTGTDDKTIVTPLKLHSKKATESSEGIIQVATQAETVTGTSPTKAISPKNFKYVVQQETTWEASPTTRGFVKISENAITWVGNNTAGSTKPLDQYVKSGYAISPYELNKTLANYLPLMAQAEDSRNLDGLDSLQFIRRDIDQTVNGKLTLTKELVTSAAITSTAAATFDSVLSIKTVTIGNNTGNAIFNMAGTTNPWAISALSSKDTIEFKSGTSANALVLNKNGDTTIAGQITAPNINITSAYKMNGVNIIAAETIGSTPVVAIGSTTQKMAVKSVDAANIDVYDKDSPSAPYKILTSKNAVDIVGQNFVKKIGDTMSGRLTINAAMSVIMDQDKAMGALTAETIGTWSTEITKQALYNTLPGYVVPVFVKDDQGQSTPIVESYTEVKSIGTMSQFGVSSAYTYRIWTPRPQTVQANHSPVSMYTQIWDSARNVWGQWSRMFTSEAPPTAADIGAVSTAGSAFDNLTIHKWLQIGNVRIEPDDVTRTVKFTWIDTP
Physico‐chemical
properties
protein length:1258 AA
molecular weight: 136883,26680 Da
isoelectric point:5,47248
aromaticity:0,06995
hydropathy:-0,28569

Domains

Domains [InterPro]
DC_1986
ATT
14–128
DC_1986 DC_1209
IPR048391
ATT
1103–1204
IPR048391
YP_010090962.1
1 1258
Architecture
ATT
STR
ATT
STR
ATT 14-128 | STR 344-1102 | ATT 1103-1204 | STR 1205-1245 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EcS1
[NCBI] 		2083276 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Kagamiyamavirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010090962.1 [NCBI]
Genbank nucleotide accession
NC_055721 [NCBI]
CDS location
range 155570 -> 159346
strand +
CDS
ATGGCCGATATTTTAAAACCTGCTTTCCGTGCCACATCCGGCCTTGATGCAGGTGGCGATAAAGTTATCAACGTTGCGAAAGCTGATTTCGACGTTTTAAGTGATGGTGTTAACGTTGATTTCTTCATTGAAGAAAACACCATCCAAGAATATATTGAAACACGTGCATACCGTCAAAACTTTGCTGTTATGTTTGATGGACGTATCTGGACTGCTAAAGCTGATATTGCTTCACCTTCAGGGCCATTCCAAGAAGCACGTTGGACTGCATTACGTACTGACCCAAAATGGAAATATGTTACTTCAGGGGCGAACAATGCTCTTAATTCAGGCGATACCATTTCTGTTACTACTGAATTAGGCGATGTTGGATTCATTTTACCAAATGATCCACAAGATGGCGACACCATTGTAATTAAAGATGTCGGTGCGAAGGTTGGTTACAATTCACTTAAAGTAAAAGTATCAAACCAACAGATCGTTAATTTAGGTAACAAAGTAAATGAACTTCTGATTACCAAACCACGTTCAGAAAACGTGTTTATTTTTAGTAATCGTTTATGGTATTTTTATGCTGCTGAAGAAAGTATTCATGCAACTCAAATCACTGTAGCAAATAACGAATATCGTGCATCGGCTAGTGAACGTATCTTCCGTACTCACTCAGCGCCAGGTGCAATCATTGTTGTTCTGCCTAAATACGCAAACAATGGTGATATCATTTATTTCACTGACCTTGATGGGTTAGCTCCGTTACAACATTTAATTGTTAAGACATTTGATAACACTTCAAGTATTGGTAAAGCTGGACAATATCAGATTGAATCACGTACTTCGGCCGATGGCTTAGTTATCTACGATGCATCTACTAAAGTATGGAAGATTTGGGACGGCGATATCAGACAACGTCTTCGTATTATTCGTGATGACGTAAATCTGTTAGCCAATGAAAGTGTCATGGTTTTTGGTGTTAATAACTCAGTTCAAAAAACAATTAACATTAAATTACCTGCTGGCGTTGCGATCGGTGATAAAGAACGTATCGCAATGAACTATATGCGTAAAGGTCAGAAAGTAATTATTACCGCTGCAACTGGCGATAAAATTGCTACTTCTAAAACTTTGCTTCAGTTCCCTAAACGTTCTCAGTATCCACCTGATGTTGAATGGGTTAAAGTCGATTCATTAGAATTTGATGGTACCATTGATTATGTTCCTATTATGGAATTATCTTATGTGGAAGATGGTGCTGAAAAGTATTGGGTTGTTTCTACTAATGATCCGACAGTAGAACGTGTTGATGCAACTAGTGATGCTAATAGACAACGTTTAGGTGTTATTGCTCTGGCAAGCCAGGCGCAAGCTAATGCGAACCATGAACAGACTCCTGAAAAAGAATTAGCTATTACTCCAGAGACTTTAGCTAACAGAACAGCTACTGAAACTCGTCGTGGTATAGCACGTGTAGCAACAACAGCTGAAGTTAATAAATTAACGACTGACACTTATGCTGATGATACTATTATTACACCTAGAAAGTTAAATGAACGTTCAGCTACTGAAACTCGTCGTGGACTTGCTGAAATTGCAACTCAGCCTGAAACTAATGCCGGAACAGATGATACAGTCATTATAACGCCGAAAAAACTAGAAGCACGTCGTGCAACTGAAACTATGGCTGGTATTGCGCCTTTAGTTGTTTCAGGTGGTATTCCAGGTATTGACCGTGATACTGTAGGAACTGGCATTTACGAACGTACTGAACATACTCGTCAAGTAACGCCTAAGACCTTGTTTGAAAATAAGGCTACTCAGACGGCGCAAGGTGGTGTTTGGATGGCAACTGGCAATGAAACTATTGCTGGGGTAGTTGATACTCCTGCGATGCCTCTAGCTGTGTCTCCTGAACAACTACATAAAAAGACTGCTACTGAAACTCGTATTGGTTTTACCGAAATTGCTACACAACCGGAAACTGATGCTGGGACTGATGACTTCAGATTCATTACGCCTAAGAAATTAAATAACCGTAATGCTACCGAAACTTTGACAGGTATATCGCGTGTCGCGACACAAGTGGAATTTGATGCTGGTACTTTAGATAATGTTATTTCAACTCCGTTGAAAATTAAAACTAGATTTAATGATACCGCTCGTACTTCTGTTATCCCAGCCAGTGGTTTAACTGAATCAGGAACTCTCTGGAACCATTATACACTGGATATTCGAGAAGCATCTGAAACACAACGTGGTACAGCTCGTTTAGCGACTCAACTTGAAGTAAATACTGGTACAGATGATAAAACAATTGTTACTCCTTTAAAACTTCATAGCAAAAAAGCTACTGAATCTTCTGAAGGTATTATCCAAGTAGCAACTCAGGCTGAAACAGTTACAGGCACATCTCCAACTAAAGCAATATCGCCTAAGAACTTCAAATATGTTGTTCAACAAGAAACGACTTGGGAAGCAAGTCCAACCACTCGTGGTTTTGTTAAGATTTCTGAAAATGCTATTACTTGGGTAGGTAATAATACAGCTGGGTCTACTAAACCATTAGACCAATATGTGAAATCTGGGTATGCTATTTCTCCATATGAGTTGAATAAAACTCTGGCTAATTATTTGCCATTAATGGCTCAAGCTGAAGATTCACGTAATTTAGATGGACTTGATTCACTTCAATTCATCCGTCGTGATATCGACCAAACTGTGAATGGCAAATTAACTCTGACCAAAGAGTTAGTGACTTCTGCTGCTATTACTTCAACTGCCGCTGCAACATTTGATTCAGTATTAAGTATCAAAACAGTGACAATTGGTAATAATACAGGTAATGCTATTTTCAATATGGCTGGGACCACGAACCCATGGGCTATTTCTGCATTATCATCTAAAGATACTATTGAATTCAAGTCTGGTACTTCAGCTAATGCTTTAGTATTGAATAAGAATGGTGATACAACAATTGCTGGACAAATTACTGCACCGAATATCAATATAACTTCAGCATATAAAATGAATGGTGTTAACATCATTGCTGCTGAAACAATTGGTTCAACTCCAGTAGTTGCAATTGGTTCGACTACCCAAAAGATGGCTGTTAAAAGTGTTGATGCTGCTAATATCGATGTATACGATAAAGACTCACCATCTGCGCCGTATAAGATATTAACATCTAAAAATGCTGTGGATATTGTAGGTCAAAACTTCGTTAAGAAGATTGGCGATACAATGTCTGGACGTTTAACTATTAATGCCGCGATGTCTGTTATCATGGACCAAGACAAAGCTATGGGTGCATTGACTGCCGAAACAATAGGTACTTGGTCAACCGAAATAACTAAACAAGCATTGTATAACACTTTGCCTGGTTATGTCGTTCCAGTATTTGTTAAAGATGACCAAGGACAAAGCACTCCTATTGTAGAAAGTTATACCGAAGTTAAGTCAATCGGTACAATGTCTCAATTTGGTGTATCGTCAGCTTACACGTATCGTATTTGGACTCCTCGTCCTCAAACGGTTCAAGCTAACCATAGTCCAGTTTCAATGTATACTCAGATTTGGGATTCAGCTCGTAACGTATGGGGTCAATGGTCTCGTATGTTCACCTCTGAAGCGCCTCCAACGGCTGCTGACATTGGTGCTGTTTCTACTGCTGGTTCTGCATTCGATAACCTGACAATACATAAGTGGCTTCAGATTGGCAATGTTCGTATTGAGCCAGATGATGTTACTCGTACAGTTAAATTCACTTGGATTGATACTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bcb09fce2685609cdc2c395287f8bd519fd8c816b55e355acf3041f9a6cb92f0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5427
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Full genome sequencing of a novel polyvalent bacteriophage as one of T4-Family member Kawasaki,T., Saad,A.M. and Yamada,T. 2018-07-28 — GenBank