Protein

View in Explore
Genbank accession
XFC53505.1 [GenBank]
Protein name
long tail fiber proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,66
TF
Evidence RBPdetect2
Probability 0,55
Protein sequence
MADSIKRKFRGAEGFDAAGEKIVNVATADRTVLSDGVNVEFLIQENTLQQYDSTRGYTSGFAVIYDNRIWVSNRDVAKPAGDFNELYWTSVRTDAKWRVVSSGTTILKSGEFISVDTAKGNDMIFTLPNNPQDGDTIMLKDIGNKTGTVGVTINASIQDIVLRDPTNKVRSVKMTHPLSQYVFVFSNRLWNLYVSDYERHARIVTPSAVVQAQSNDFIVRRYTSPDPIRVTLPKHANTGDIINFTDLDGKNPQFHMIVSTFDDNTNIGTVGQKSVEVRTSGDGFIVYDESESIWRIWEGDLRPRMRVITDNVTLIPNEVVTVFGVNNSTQKTIDITLPTDIAIGDTVTIAMNYMRKGQKVNIRAATGDKIASSIQLLQFPKRSEYPPDAAWVMNDVLTFDGTTSYVPVIQLSYIENAGSKYWIVADNAPTVERVDSKDNETRKRLGVIALASQAQANVDYENSPEKELAITPETLANRIATKIRRGIARLVTLTEIQAPTSGPHLDDVIVTPAMLNEKTATEERRGVAETATQAEANGSTDDERIVTPKKLHNRIASETLTGIIKLVRTVGTAAGIGRDTKGTNIYDYDNNIDAVTPKSLFQFKSTEQAQGAVYLATQNEVIAGGPAQPGFPVVVTPQTLHGKTSTDSRIGLIQIAKQAEVDAGTDYTKAVTPKTLNDRKAREDLSGIAEIATQVEFDTGTDDKRIVTPLKVKTRFNSTDRTSVVALSGLVEQGTLWDHYTLDIKEASETQRGTAALATQVQVDAGTDDKTIVTPKKLQAKKATETTEGIIQVANQAETVAGTIANKAVSPKNFKYVVQEEKTWESTIAQRGFVKLSEKALTFKGDTLNGSGRLLPGDLINEPALTDLPKEGYAVSPYEMNRALQYFLPAKAKAVDSDLLDGIDSTQFVRRDIDQVVNGKITFKKDVTLEAPLVSSSTAKFTTVNATISVDIGDTLGNSRINLNTLANGWNIETLANGSTLDFTATDKVLTLNRNGNVTVAQTLTAMNKVDANKGFSVEGGTMVINPSSTEIVIGTQSKQVTLQNKDAKTFSVVDPSGTYTMLNTKNAFEITAQGFVKKAGDSMTGPLQIQAPLTVQIPEGRVAPDVKPSDDNPASWSASITSAAIYNKLPGFGVPVMEKDAEGQDTGFVDHYEYVKGPGVLTQHGIGKTAVYQIWAPRPTVQELNHNAQTFWIRNFNIVTGEWDEFGKMYTSVQRPTAGEIGAVSTSGSAFNNLTIRDWLQIKNVRIVPNETTRTVDFIWVDE
Physico‐chemical
properties
protein length:1264 AA
molecular weight: 138117,57710 Da
isoelectric point:5,43662
aromaticity:0,06962
hydropathy:-0,32389

Domains

Domains [InterPro]
DC_1986
ATT
12–137
DC_1986 DC_1209
IPR048391
ATT
1116–1211
IPR048391
XFC53505.1
1 1264
Architecture
ATT
STR
ATT
STR
ATT 12-137 | STR 345-1115 | ATT 1116-1211 | STR 1212-1254 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFC53505.1
1 1264
Domain Start End Length (AA) Confidence
N-terminal 1 945 945 0,9471
Central domain 946 1144 200 0,2819
C-terminal 1145 1264 119 0,4285
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-945
Central
946-1144
C-terminal
1145-1264

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EnC15
[NCBI] 		3239070 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae complex
[NCBI] 		354276 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Enterobacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFC53505.1 [NCBI]
Genbank nucleotide accession
PQ096439 [NCBI]
CDS location
range 154977 -> 158771
strand +
CDS
ATGGCAGATTCAATCAAACGCAAGTTTCGTGGCGCAGAAGGCTTCGATGCTGCGGGTGAAAAAATAGTCAACGTTGCTACTGCTGACCGCACGGTGTTATCCGATGGCGTCAACGTTGAATTCCTTATCCAAGAAAACACATTACAACAATATGATTCTACTCGTGGTTACACTTCTGGCTTCGCAGTAATCTATGATAACCGCATTTGGGTATCAAATCGTGATGTCGCAAAACCTGCTGGCGATTTTAACGAGCTCTATTGGACTTCAGTTCGTACCGACGCAAAATGGCGTGTAGTTTCAAGCGGAACAACAATTTTAAAATCAGGTGAATTTATTTCTGTCGATACTGCAAAAGGTAATGACATGATTTTCACCTTACCAAATAATCCGCAAGATGGTGATACAATTATGCTGAAGGATATCGGTAATAAAACCGGTACCGTTGGTGTAACTATCAACGCATCTATTCAAGACATTGTTCTGCGTGACCCTACGAATAAAGTTCGCTCAGTTAAAATGACTCATCCACTGTCTCAGTACGTGTTTGTGTTCAGCAATAGATTGTGGAATCTTTATGTGTCTGATTACGAGCGCCACGCTCGTATTGTAACACCAAGCGCAGTTGTTCAAGCTCAATCTAACGACTTTATAGTTCGCAGATATACTTCTCCAGACCCAATCCGTGTTACTTTGCCTAAACATGCAAACACTGGAGATATCATCAACTTTACTGACCTTGATGGAAAGAACCCTCAATTCCATATGATTGTTAGTACTTTCGATGATAACACCAATATCGGTACTGTTGGTCAAAAATCTGTAGAAGTTCGTACTTCTGGTGACGGATTCATCGTATATGATGAATCAGAGTCAATCTGGAGAATCTGGGAAGGCGACTTACGTCCGCGCATGCGTGTGATCACCGACAACGTAACTTTAATTCCAAACGAGGTTGTTACTGTTTTTGGTGTAAATAACAGCACTCAGAAAACTATTGATATAACTTTACCTACTGATATTGCTATTGGCGATACTGTCACTATTGCAATGAACTATATGCGCAAAGGCCAGAAAGTAAATATCAGAGCAGCTACTGGAGACAAAATTGCTTCAAGTATTCAATTACTGCAATTCCCTAAACGCTCAGAGTATCCGCCCGATGCAGCTTGGGTAATGAATGATGTTCTTACTTTCGACGGCACTACTTCTTATGTTCCAGTGATTCAGTTATCTTATATTGAAAATGCTGGTTCAAAATACTGGATTGTAGCAGATAATGCTCCGACGGTAGAACGTGTTGATTCAAAAGATAATGAAACTCGTAAGCGTCTTGGTGTTATTGCTCTTGCTTCTCAAGCTCAAGCTAACGTTGATTATGAAAATAGTCCAGAAAAAGAATTAGCAATTACTCCAGAGACTTTAGCAAACCGTATTGCTACCAAGATTCGTCGTGGTATTGCTCGTCTGGTCACATTAACTGAAATTCAGGCTCCAACTTCTGGTCCGCATCTGGATGATGTTATTGTTACTCCAGCTATGCTGAATGAAAAAACAGCTACTGAAGAAAGACGTGGTGTTGCTGAAACCGCTACTCAGGCTGAAGCAAATGGTTCAACTGATGATGAAAGAATTGTTACTCCGAAGAAGCTGCATAACCGTATTGCTTCTGAGACGTTGACTGGTATTATTAAATTAGTAAGAACTGTTGGAACTGCGGCGGGTATTGGACGAGATACGAAAGGTACTAACATTTATGACTATGATAACAACATTGATGCGGTAACTCCAAAATCACTGTTCCAATTCAAGTCTACTGAGCAAGCTCAGGGCGCTGTTTATCTGGCTACTCAAAACGAAGTAATTGCTGGTGGTCCAGCTCAACCTGGTTTCCCAGTAGTTGTTACTCCACAAACGCTTCATGGTAAAACTTCAACTGATTCAAGAATCGGTTTGATTCAAATTGCTAAACAAGCTGAAGTAGATGCTGGTACAGATTATACAAAAGCAGTTACTCCTAAAACTCTGAATGACCGTAAGGCTCGTGAAGATTTAAGTGGTATTGCTGAAATTGCAACTCAAGTTGAATTTGATACCGGAACGGACGATAAACGTATCGTAACTCCATTAAAGGTTAAAACTCGTTTCAATTCAACCGATAGAACATCTGTTGTTGCTCTGTCTGGATTAGTTGAGCAAGGAACCTTGTGGGACCATTATACATTAGATATCAAAGAAGCATCTGAGACCCAGCGTGGTACCGCTGCTCTGGCTACTCAAGTACAAGTTGATGCTGGTACTGATGATAAGACGATTGTTACGCCTAAGAAATTACAGGCTAAGAAAGCAACTGAAACTACCGAAGGTATTATCCAAGTTGCCAACCAAGCCGAAACAGTAGCCGGTACTATTGCTAATAAAGCAGTTTCTCCTAAGAACTTTAAGTATGTTGTCCAAGAAGAAAAAACTTGGGAATCTACTATAGCTCAGCGTGGTTTCGTTAAATTATCAGAAAAAGCACTCACCTTTAAGGGTGATACTTTAAATGGTTCTGGTCGTCTGCTTCCAGGTGATTTAATTAACGAACCCGCTTTAACAGATTTGCCTAAAGAAGGTTATGCAGTATCTCCATATGAGATGAACCGTGCTCTGCAATACTTCTTGCCGGCTAAAGCAAAAGCTGTTGATTCGGATTTACTGGATGGAATTGATTCAACTCAGTTTGTTCGCCGCGATATCGACCAAGTAGTTAATGGTAAAATTACATTCAAAAAGGATGTTACTCTAGAAGCTCCTCTGGTGTCCTCTAGTACGGCCAAATTCACTACCGTGAATGCTACTATATCTGTTGATATTGGTGACACCCTGGGTAATTCTAGAATCAATTTGAATACTTTGGCGAATGGCTGGAACATTGAAACTCTGGCGAATGGTTCAACTCTTGATTTTACTGCTACAGATAAAGTTCTGACGCTTAATCGTAATGGAAACGTAACGGTTGCTCAGACTCTGACGGCAATGAACAAAGTTGACGCTAATAAGGGCTTTTCAGTTGAAGGTGGTACAATGGTTATCAATCCTTCCTCTACTGAAATTGTCATTGGTACTCAATCTAAGCAAGTAACATTGCAGAACAAAGATGCTAAGACATTCTCAGTTGTAGACCCTTCTGGTACATACACAATGTTGAACACCAAAAATGCTTTTGAAATAACGGCTCAAGGATTCGTTAAGAAAGCAGGTGATTCAATGACTGGACCACTTCAAATTCAAGCTCCATTAACTGTTCAGATTCCTGAAGGGCGAGTTGCTCCTGATGTTAAACCATCGGACGATAACCCAGCTTCATGGTCTGCATCAATTACATCAGCAGCAATTTACAATAAATTGCCTGGTTTCGGTGTTCCAGTTATGGAAAAAGATGCTGAAGGACAAGACACCGGTTTCGTAGACCATTACGAATATGTTAAAGGTCCTGGTGTATTAACTCAACATGGTATTGGTAAGACTGCGGTCTATCAAATTTGGGCGCCTCGCCCAACTGTGCAAGAGTTAAACCACAATGCTCAGACTTTCTGGATTCGTAACTTCAACATCGTCACTGGCGAGTGGGACGAATTTGGTAAGATGTACACCTCAGTTCAGAGACCTACTGCAGGGGAAATTGGTGCTGTATCAACTTCTGGTTCAGCTTTCAATAACTTGACAATTCGCGATTGGTTACAGATTAAGAACGTTCGTATTGTTCCTAATGAAACTACTCGCACTGTTGACTTCATATGGGTTGATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f04b8bc45753723f5d1bd6ec6491c39f05d1841fdddf1af68b63c4e071bc0ac1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2646
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rational Design of Frontline Institutional Phage Cocktail for the Treatment of Nosocomial Enterobacter cloacae Complex Infections Subedi,D. and Barr,J. 2024-07-01 — GenBank