Protein

View in Explore

Genbank accession

AIX42766.1 [GenBank]

Protein name

baseplate wedge initiator

RBP type

Evidence RBPdetect2

Probability 0,95

Protein sequence

MVTQQIKLPLADYSQFGADLRSIACAIEYGNQGMIGDGDGVTLRAISINFNHVGALGDITNDPNLAIQSNEVIELNGGQVSYVSIDQKGDFRVGEAFYVNQETGEVSFTDTVTDLTALSSLTITDGTNSSIITPTSGRFGNVLISGQSVESVTGDLNIKTGGSGEINIFGNTNVIGILTAQIIEINAIQKGDTAIALDDTGTDGTIRFITDGQEAQRITNQQRVGINTTTPVTQLEVKGGTQLENLNVTGIATLNGVGIATIGGDPDFRNLNITGLSTFAGVGTFLSDLYVGGNLSVLGDIKFDEVDARNANITGIATVGFASITDARVGSALTNLGHTQLNTLNVSGVSTLSLLEVSGNSVFTGISTFNNNVTINGDLTINGSQNVDSFGTGDLIVSGIASINQAKIATGIVTTLTATRTESAELKVTGLSTFVGVATFANDVFVAGNLNVLGDIAYDEVTGRNLNISGIATIGFASITDAKIGVATITKLDVTEINVDGGTGIDDNSVTTENLVVSGIATINSGILTTLQAEVGSITNLTAGVSTFTGIVTTTEDLYVGGNLYVFNDIFYDEITGRNLSISGVSTLGFASVRDLRVSGVATFLGDVEISGSQIVDSLITGDLEVTGVTTTKELRFTDAVGVGLTLTNLVVTGNAELNGSGIVTAGQDINFRNLEVAGLSTFVGLQSFRSAVGTALTVYNLRVPENGIVSLPGIPVQGGDAEFRNVNVTGVSSFSGVSTFGSDLYVDGNLFVSGLDFRETLAGENLLVAGVGTVNNLNSNIGIITHLQAGISTFTGITTFQSDASFLSDVYVDGNLNVTGDIRYDEVNGRNLNISGIATIGYSSITDAKIGVATISTLSFGDGVGTALTLTDLTVTGDANLNGSGIVTAGSDVAFRNLEVTGLSTFTGVGTFLSDLYVGGDLFVFNDIKYDEINGRNLNISGISTLGFTSISDIRVSGGSTFLGNVEIDGNLDVTGDLTFDEFDATNANITGIATIGNLLAGVGTITTLSSTDGEITTLTSTDTVVGTLTATDATITTLGVTDSIVGTSTITTLSVTDSVVGTSTITTLNFTDGVGVALTLTDLNVLGEANLNGSGIATAGSDIEFRNLSITGLSTFVGVATFQDDLYVAGNLNVLGDLTYDEVNGRNLNISGIATIGFASITDLRVSGVTTFLGPVNIDGGQQTDFIQTTDLIVTGVATIGYATVTKLIADHSDMRNLNVSGIATIGSLVSDGNGGIIVDGAVSISGIVTIGENSIILDGRKDVEAIYLGDTGRAIVSGITTDGKRTYVKFDDGRFDRLNVSGISTFNDVVSTSSTITNLDVTTATVGFLTATQGYVGVLTVGTFTNDGGGSVIGDDITTRNLNVTGVSTFAGIVTTTGDLYVGGDLFVFNDIFYDEINGRNLNITGVATIGYSSITDVRVSGVATFLGDVNISGVTSVTTLEATGIDAYRVTTQRLIVPDDGFVQLPGIPVSGGSAEFSELLITGISSFVGVATFKDDVYIDGDFIVGGSQVIDNVATENIIISGIATIRTGEITELNVGIATVGFLTATDGYIGVLTAQNYTSLSDERLKSNIETIDDALAGVLRLDGVMFQWNNTGKTDMGVIAQQVEAVFPEIVHGDDTKGVNYNGLIGVLIEAVKELKVENDSLRERLDRLE

Physico‐chemical properties

protein length:	1659 AA
molecular weight:	171411,53970 Da
isoelectric point:	4,05003
aromaticity:	0,06209
hydropathy:	0,27474

Domains

Domains [InterPro]

DC_0407
STR
2–84

DC_0407 DC_0407 DC_0407 DC_0407 DC_0407 DC_0407 DC_0407 IPR036388

DC_0407
STR
341–421

DC_0407 DC_0407 DC_0407 DC_0407 DC_0407 DC_0407

IPR030392
CHP
1569–1655

IPR030392

IPR030392
CHP
1569–1620

IPR030392 Coil

AIX42766.1

1 1659

Architecture

STR

STR 2-84 | STR 164-1655 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0407	STR	DC_0407	2	84	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	164	362	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	341	421	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	408	491	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	485	612	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	603	693	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	687	782	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	773	857	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	848	963	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	960	1062	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	1038	1258	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	1252	1452	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
DC_0407	STR	DC_0407	1441	1654	Novel HMM	DC_0407	Central	Low	Positional only	72 proteins / 72 hits
IPR036388	RBD	IPR036388	1558	1637	Merged direct domain	Winged helix-like DNA-binding domain superfamily	C-terminal	Low	Positional only	96 proteins / 96 hits
IPR030392	CHP	DC_0088	1569	1655	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
IPR030392	CHP	DC_0088	1569	1620	InterPro cluster	Intramolecular chaperone auto-processing domain	C-terminal	High	Text match	3502 proteins / 3959 hits
Coil	Unmapped	-	1634	1654	Coils	Coil	-	-	-	-

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Synechococcus phage ACG-2014f [NCBI]	1493511	Uroviricota > Caudoviricetes > Pantevenvirales > Atlauavirus > Atlauavirus tusconc8
Host	Synechococcus sp. WH 7803 [NCBI]	32051	Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Genbank protein accession

AIX42766.1 [NCBI]

Genbank nucleotide accession

KJ019147 [NCBI]

CDS location

range 199581 -> 204560
strand +

CDS

GTGGTAACACAGCAGATAAAGTTACCCCTAGCAGACTACAGTCAGTTTGGTGCTGACCTCAGGTCTATCGCTTGTGCCATTGAATATGGTAACCAGGGTATGATTGGTGATGGTGATGGAGTAACTCTCCGTGCTATCTCTATCAACTTCAACCATGTAGGTGCTCTTGGTGATATCACTAACGATCCTAACCTAGCGATTCAATCGAACGAGGTTATCGAACTCAATGGTGGTCAAGTATCCTATGTAAGTATTGACCAGAAGGGTGACTTCAGAGTTGGTGAAGCATTCTATGTAAATCAGGAGACTGGTGAAGTATCCTTTACAGATACTGTAACAGACCTAACTGCCCTATCCTCACTCACTATTACTGATGGCACTAACAGTAGTATCATTACTCCTACTTCTGGTAGGTTTGGTAATGTTCTTATCAGTGGTCAGAGTGTAGAGAGTGTAACCGGAGACCTCAACATTAAGACTGGTGGTTCCGGTGAGATCAATATCTTTGGTAACACCAATGTTATTGGTATTCTAACCGCTCAGATCATTGAGATTAATGCTATTCAGAAGGGCGATACAGCAATCGCTCTAGATGATACTGGAACTGATGGGACTATCCGTTTTATCACAGACGGACAAGAAGCACAACGTATTACAAACCAACAGAGAGTTGGTATTAACACCACCACCCCAGTTACTCAGTTAGAAGTTAAGGGTGGAACACAACTAGAGAACTTAAATGTAACTGGTATTGCCACACTTAATGGTGTTGGTATTGCTACTATCGGTGGTGATCCTGACTTCAGAAACTTAAATATCACTGGACTATCGACGTTCGCTGGTGTTGGTACTTTCCTCAGTGATTTGTATGTTGGTGGTAACCTCAGTGTCCTAGGTGATATCAAGTTTGATGAAGTTGATGCGAGAAACGCCAACATCACTGGTATTGCCACAGTTGGTTTCGCCTCTATCACAGATGCCAGAGTTGGAAGTGCCCTCACTAACTTGGGTCACACTCAACTCAATACTCTGAATGTAAGTGGAGTATCTACACTATCACTACTAGAAGTCAGTGGTAACTCAGTATTTACTGGTATCTCTACCTTCAATAACAATGTAACTATCAATGGTGACCTCACCATTAATGGTTCTCAGAATGTAGATAGTTTTGGAACTGGTGATTTAATAGTTAGTGGTATTGCTAGTATCAACCAGGCGAAGATCGCCACTGGTATTGTTACCACACTAACTGCCACTAGAACAGAGTCAGCAGAACTAAAAGTAACTGGTCTCTCCACCTTTGTTGGTGTTGCTACCTTTGCTAACGATGTATTCGTGGCAGGTAACCTCAATGTTCTAGGAGATATTGCATATGATGAAGTCACTGGTAGAAACCTAAACATCTCCGGTATCGCAACCATCGGGTTCGCCTCTATCACAGACGCCAAGATTGGTGTCGCCACTATTACAAAACTTGATGTCACTGAGATCAATGTAGATGGTGGAACAGGTATTGATGATAACTCAGTAACTACAGAGAACCTAGTTGTTAGTGGTATCGCTACCATCAACTCAGGTATCCTCACAACCCTCCAGGCGGAGGTAGGAAGTATCACAAACCTCACCGCTGGTGTTTCTACCTTTACTGGTATTGTAACCACTACAGAGGATCTATACGTTGGTGGAAACCTCTACGTATTCAATGATATCTTCTATGATGAAATCACTGGTAGGAACCTTTCTATCTCTGGAGTATCTACATTAGGTTTCGCTTCTGTTAGAGATCTAAGAGTATCTGGTGTCGCTACATTCCTTGGTGATGTGGAGATCAGTGGATCACAGATTGTTGACTCACTAATAACTGGTGACTTGGAAGTTACTGGTGTTACTACAACTAAGGAACTAAGATTTACAGACGCTGTTGGTGTAGGACTCACACTCACCAATCTAGTTGTAACTGGTAACGCGGAACTCAATGGTTCTGGTATTGTTACCGCTGGTCAAGACATCAACTTCAGAAACCTAGAAGTTGCTGGTCTATCAACCTTTGTTGGTCTCCAGTCCTTCAGGTCAGCAGTTGGAACGGCACTCACAGTTTATAACCTAAGAGTTCCTGAAAATGGTATTGTTTCACTACCTGGTATTCCTGTTCAGGGTGGGGACGCTGAGTTTAGAAACGTCAATGTAACTGGTGTATCTTCCTTCAGTGGAGTATCAACTTTCGGTAGTGACCTCTATGTGGATGGAAACCTATTTGTTTCTGGTCTAGACTTCAGAGAGACACTTGCTGGTGAAAACCTATTAGTTGCTGGTGTTGGTACTGTTAATAATCTCAATAGTAATATTGGTATTATCACTCATCTACAGGCAGGTATATCAACCTTCACTGGTATCACCACCTTCCAGAGTGATGCCTCCTTCTTGAGTGATGTATATGTAGATGGAAACCTTAATGTTACGGGTGACATTAGATATGATGAGGTGAATGGTAGGAACTTGAATATCAGTGGTATCGCTACCATTGGTTACTCCTCTATCACAGACGCCAAGATTGGTGTTGCTACTATCTCCACACTATCCTTTGGTGATGGTGTTGGAACAGCACTCACACTTACAGACCTCACGGTAACAGGTGACGCCAACCTCAATGGTTCTGGTATTGTAACCGCTGGTTCTGATGTAGCGTTTAGAAATCTAGAAGTAACTGGACTATCTACCTTCACTGGTGTTGGTACTTTCCTCAGTGACTTGTATGTTGGTGGTGACCTCTTTGTATTCAATGATATCAAGTATGATGAGATTAATGGTAGAAACCTAAACATCTCTGGTATCTCCACACTTGGTTTCACTTCTATCTCCGACATCAGAGTATCTGGTGGTTCTACCTTCTTAGGTAATGTAGAGATTGATGGAAACCTAGATGTAACTGGTGACCTAACCTTTGATGAGTTTGATGCCACTAACGCTAACATCACTGGTATTGCCACTATTGGTAACCTACTAGCGGGTGTGGGAACTATCACCACACTATCATCTACTGATGGTGAGATTACAACACTAACCTCTACTGATACTGTTGTTGGTACTCTAACCGCCACTGATGCCACTATCACTACACTAGGTGTTACTGATAGTATAGTTGGAACCTCTACCATTACAACACTCAGTGTTACTGATAGTGTAGTTGGAACTTCTACTATCACAACACTCAACTTCACTGATGGTGTTGGAGTAGCACTCACACTCACTGACCTCAATGTTCTAGGTGAAGCTAACCTCAATGGTTCTGGTATCGCAACCGCTGGTTCTGATATAGAGTTTAGGAACCTCAGTATTACTGGTCTCTCCACCTTTGTTGGTGTAGCAACCTTCCAAGATGACTTGTATGTGGCAGGTAACCTGAATGTATTGGGTGACCTAACCTATGATGAAGTGAATGGTAGAAACCTTAACATCTCTGGTATCGCTACCATTGGTTTCGCCTCTATCACAGACCTAAGAGTATCTGGTGTAACTACCTTCCTCGGTCCTGTTAATATCGATGGTGGTCAGCAAACCGACTTCATTCAAACCACAGACTTGATTGTCACTGGTGTTGCCACTATTGGTTACGCAACTGTCACTAAGTTGATCGCTGATCACAGTGATATGAGGAACCTGAATGTATCAGGTATCGCCACTATTGGTAGTCTCGTATCAGATGGTAATGGTGGAATCATTGTAGATGGTGCTGTATCCATTAGTGGTATTGTTACTATTGGTGAAAACTCTATCATTCTCGATGGTAGAAAGGATGTAGAAGCGATCTACTTGGGTGATACTGGAAGAGCAATCGTCTCTGGTATTACTACTGATGGTAAGAGAACTTATGTCAAATTTGATGATGGTAGATTTGATAGACTAAATGTATCTGGTATCTCTACCTTCAATGATGTAGTATCCACATCATCTACTATCACTAACCTAGATGTAACCACAGCAACTGTTGGTTTCCTAACCGCAACTCAGGGTTATGTTGGAGTTCTAACTGTAGGAACATTCACCAATGATGGTGGTGGTTCTGTTATTGGTGACGATATCACAACCAGAAACCTGAATGTAACTGGTGTATCTACCTTCGCAGGTATTGTTACTACTACTGGTGACCTCTATGTGGGTGGTGACCTCTTTGTATTCAATGATATCTTCTATGATGAGATCAATGGTAGAAACCTGAATATCACGGGTGTCGCCACTATCGGTTACTCCTCTATCACTGATGTTAGAGTATCTGGTGTAGCAACATTCCTAGGTGATGTGAATATCTCTGGTGTTACTTCTGTAACCACACTGGAGGCAACTGGCATTGATGCCTATCGGGTTACTACTCAGAGATTGATCGTACCTGATGATGGTTTCGTACAACTACCTGGTATCCCAGTTAGTGGTGGTTCCGCTGAGTTCTCAGAACTATTAATAACTGGTATATCTAGTTTCGTTGGAGTCGCCACCTTCAAGGATGATGTGTATATCGATGGTGACTTTATTGTTGGTGGATCTCAGGTTATTGATAATGTTGCTACTGAGAACATTATCATCAGTGGTATTGCTACAATAAGAACAGGTGAGATCACTGAACTAAATGTAGGAATTGCTACAGTTGGATTCCTCACAGCCACTGATGGATACATTGGAGTTCTAACAGCTCAGAACTACACTTCACTCTCTGATGAGAGACTCAAGTCTAACATTGAAACTATTGATGATGCTCTAGCGGGTGTTCTCAGACTCGATGGTGTAATGTTCCAGTGGAATAATACTGGCAAAACTGATATGGGTGTTATCGCCCAACAGGTGGAGGCGGTATTCCCCGAGATCGTACATGGGGATGATACAAAGGGAGTCAATTATAACGGTCTTATTGGTGTACTGATCGAAGCAGTCAAGGAACTCAAAGTAGAAAACGATAGTCTCAGAGAGAGACTAGACAGACTGGAGTGA

Genome Context

Tertiary structure

PDB ID

a80a2bfaa9b24e41f5bb3378820ea3c58ed487d6bf8868787ed6883d97f92c9a

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,5093

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Ecological redundancy of diverse viral populations within a natural community	Gregory,A.C., LaButti,K., Copeland,A., Woyke,T. and Sullivan,M.B.	2015-03-20	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature