Protein

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Genbank accession
AXN54107.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,85
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MASKIKVDQIEGAAGSSITIPSGQTLTITDGLAASTIASGTIADARIPNLNASKINAGTLADAQIPNLNASKINAGTIPVARGGTGVTSLGAAGTALKVNSGGSALEFGSVASKIIGMEKVYHSTTAVAFTNQSGTNIGPNNIHVPYSLRIGGTYNKQVSNSHIRLQGWYNFHHSSSNIHGMVAYRDGQSGSVRNFNHDARDFGWYGASNGSWSMAYDVWFDGAVSAEVQGTGNMTFYVVGAVSGNRSHTHELNANGYSNSIENQSDRPNYGGFSSMIVTEYEA
Physico‐chemical
properties
protein length:284 AA
molecular weight: 29645,26790 Da
isoelectric point:6,74886
aromaticity:0,08099
hydropathy:-0,22993

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXN54107.1
1 284
Domain Start End Length (AA) Confidence
N-terminal 1 34 34 0,1214
Central domain 35 233 200 0,0500
C-terminal 234 284 50 0,9990
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-34
Central
35-233
C-terminal
234-284

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC109P
[NCBI] 		2283019 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp. HTCC7211
[NCBI] 		439493 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXN54107.1 [NCBI]
Genbank nucleotide accession
MH598805.1 [NCBI]
CDS location
range 33211 -> 34065
strand +
CDS
ATGGCTAGTAAAATAAAAGTAGACCAGATTGAGGGAGCGGCAGGTTCTTCTATAACAATCCCTTCTGGTCAAACATTAACAATAACAGATGGTTTGGCGGCTTCTACTATCGCAAGTGGAACAATAGCAGACGCTAGAATACCAAACCTAAACGCAAGTAAAATCAATGCAGGAACTTTGGCAGACGCACAAATTCCTAATTTAAACGCAAGTAAAATTAATGCAGGAACAATTCCTGTAGCAAGAGGTGGAACTGGTGTAACTTCATTAGGTGCGGCAGGTACAGCACTTAAAGTAAATTCAGGTGGAAGTGCTTTAGAATTTGGTTCAGTTGCTTCAAAAATTATTGGTATGGAAAAAGTTTACCATAGTACAACTGCTGTTGCATTTACAAATCAATCAGGAACAAATATAGGTCCAAATAATATTCATGTACCTTATAGTTTAAGAATAGGTGGCACTTATAACAAACAAGTATCTAACTCACACATAAGACTACAAGGTTGGTATAACTTTCACCACAGTTCTTCAAATATTCATGGAATGGTGGCATACAGAGATGGTCAATCTGGTTCTGTAAGAAACTTTAACCATGACGCTAGAGATTTTGGTTGGTATGGTGCTAGTAATGGTTCTTGGTCTATGGCTTATGATGTATGGTTTGATGGTGCAGTGTCAGCAGAAGTACAAGGTACAGGAAACATGACTTTCTATGTAGTAGGGGCTGTATCAGGTAATCGAAGTCACACACACGAATTAAATGCAAATGGCTATAGTAACTCTATTGAAAACCAATCTGATAGACCTAACTATGGTGGTTTTTCATCAATGATTGTAACCGAATATGAAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a134ac94455d859aafc9276f44c0a492a6c736d4cb32a6a71bb49a79fc1954cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6918
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50