Protein

View in Explore
Genbank accession
QNH71627.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MKIFAKGTMLGNPLLSSEVVIPIFIAPTMPPSYTQRSGADEKWGFLDFMVTEAGAAVNSTIGRVVVTNAPSPGAQYAMTGDTAGLAIVPDTGMIYVTNGSLLTVGIRTITVTATNVAGSASTTILIAVVGTATNVIYIDPTNGDDSKTGTKPSQAIKTWAARTSKGSGTKTYAIRRGTVLDAAMVLANNETVRCYGDPALPAPKIITTTAFGLSGTDLAGATVQDVDISAGQRAVNINRGTNFKAFRCVFRVPTDGTNRQPFYTSQLTGLVFRHNWVPANSYGDNVYCRGLKNAELAYNLLETPLGSTADNMQITSERNVLYPCADVWIHHNTMVNVGGTSSKGNCVIEGCVRALVENNDFSGLYFCMSSVATFNTIRNNRMSKATYSSNSFTMGIGSAYDTGEQSWYDNRLSSPGNRAFSISGTGEASGAPLWSRYDLEINDNIGEGHTTFFHQNRLMSGYFQYNVGQNNVSNTVSGVTTVATGGDYTTRTVTPNFLNAGQGPVCLEKARITGLVQEGQTVTVSEPVFAGAVSLQYQWRLNGKYIAGATGQSFTIPAGYGSQISDRVPTFATTGFPGGAAGELSCITRGVDAAGNVMIAPALFTNDEAYMPIAA
Physico‐chemical
properties
protein length:615 AA
molecular weight: 65080,35940 Da
isoelectric point:6,54157
aromaticity:0,08780
hydropathy:-0,06309

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNH71627.1
1 615
Domain Start End Length (AA) Confidence
N-terminal 1 32 32 0,9568
Central domain 33 517 486 0,9108
C-terminal 518 615 97 0,3403
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-32
Central
33-517
C-terminal
518-615

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage V1VFA-S
[NCBI] 		2763532 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNH71627.1 [NCBI]
Genbank nucleotide accession
MT778838.1 [NCBI]
CDS location
range 9244 -> 11091
strand +
CDS
ATGAAGATCTTCGCCAAGGGCACTATGCTCGGCAACCCGCTCCTGTCGAGCGAGGTTGTTATTCCCATCTTCATCGCCCCGACGATGCCTCCCTCTTATACCCAGCGATCGGGCGCGGATGAGAAGTGGGGCTTCCTCGACTTCATGGTCACCGAGGCCGGCGCCGCGGTTAACTCCACCATCGGCCGCGTCGTCGTGACCAACGCGCCCTCGCCCGGCGCGCAATACGCCATGACCGGCGATACGGCTGGCCTCGCAATCGTGCCTGACACGGGCATGATCTACGTGACGAACGGCTCACTGCTGACGGTCGGCATTCGCACGATCACTGTCACCGCGACCAACGTCGCCGGCAGCGCCAGCACGACGATTCTCATTGCGGTCGTGGGCACGGCCACCAATGTCATCTACATCGACCCGACGAACGGCGACGACAGCAAGACCGGCACCAAGCCCTCGCAGGCGATCAAGACCTGGGCGGCCCGCACGTCCAAGGGCTCAGGCACGAAGACCTATGCCATTCGCCGCGGCACTGTGCTCGACGCTGCAATGGTGCTCGCCAACAACGAAACCGTCCGCTGCTATGGCGACCCTGCCCTCCCGGCGCCGAAGATCATCACCACCACGGCGTTTGGTCTCTCCGGCACCGATCTCGCCGGCGCAACCGTCCAGGACGTGGATATCTCGGCCGGGCAGCGCGCCGTCAACATTAACCGTGGCACGAACTTCAAGGCGTTCCGCTGCGTGTTCCGCGTGCCGACCGATGGCACCAACCGTCAGCCCTTCTACACCAGCCAGCTCACGGGCCTGGTATTCCGGCACAATTGGGTGCCGGCGAACTCCTATGGCGACAACGTCTATTGCCGCGGACTGAAGAACGCCGAACTCGCCTACAATCTGCTGGAAACGCCGCTCGGCAGCACGGCCGACAATATGCAGATCACCTCTGAGCGCAACGTCCTCTACCCGTGCGCCGATGTCTGGATCCATCACAACACTATGGTCAACGTGGGTGGCACCTCGTCCAAGGGTAACTGCGTCATCGAGGGATGTGTGCGGGCGCTGGTCGAGAACAACGACTTCAGCGGGCTCTATTTCTGCATGTCCTCGGTCGCAACCTTCAACACCATCCGCAATAACCGGATGAGCAAGGCGACCTACAGCTCCAACTCCTTCACTATGGGCATCGGCTCGGCCTACGACACCGGTGAGCAGTCCTGGTATGACAATCGCCTGTCCAGTCCGGGCAATCGCGCTTTCTCGATCTCCGGCACCGGTGAGGCTTCAGGTGCTCCGCTCTGGTCCCGCTACGACTTGGAGATCAACGACAACATCGGCGAAGGCCATACGACCTTCTTCCATCAGAACCGCCTGATGTCCGGCTATTTCCAGTATAACGTCGGGCAGAACAACGTCTCAAATACGGTCTCTGGCGTCACGACGGTTGCGACGGGTGGCGATTACACGACCCGCACGGTCACGCCGAACTTCCTCAACGCCGGTCAGGGTCCGGTCTGTCTCGAGAAGGCTCGGATCACGGGCCTGGTCCAGGAAGGGCAGACGGTTACGGTCAGCGAGCCGGTATTCGCCGGCGCCGTGTCGCTGCAGTATCAGTGGCGCCTGAACGGTAAGTATATCGCCGGCGCCACGGGTCAGAGCTTCACGATCCCGGCAGGCTACGGCAGTCAGATCTCCGATCGCGTTCCGACCTTTGCCACGACCGGCTTTCCTGGCGGGGCGGCCGGCGAGCTGTCGTGCATCACCCGCGGCGTTGACGCTGCAGGCAACGTGATGATCGCCCCTGCCCTGTTTACCAACGACGAAGCCTATATGCCGATCGCTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9d7ff0ea7b36ae42d83e3f0db52ae3b7fc506c7367d754c6c169bb4ab185ab9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7121
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Rhizobium leguminosarum bacteriophage vB_RlegS_V1VFA-S Gunathilake,D., Mackenzie,K.D., Yost,C.K. and Hynes,M.F. 2025-10-09 — GenBank