Protein

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Genbank accession
QPI17221.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MATNIRTVITYALDGSKTDFTIPFEYLARKFVVVTLIGVDRRELVLTTDYRFATKTVISTTIAWGAAQGYTSIEIRRFTSATERLVDFTDGSILRAYDLNVSQLQTIHVAEEARDMTAETIGVNNDGNLDARGRRIVNVADAVDSGDAINLGQVLQQNQNAWQARDEALGFRNEAEGFRNVATDRANVATQQAAVATDRANVATQQAADAEFQANRATQMNSEASFWNSLARRWASEDTNIVVEKGLYSARHYAILAASYQDNAVASAIAASNEASRSKTEADRAKTEADKLGNWNALAGTIDSVSGPNVSWKGIISAPSVHATSNAGYILMEPNANNPALTPIITFKGFRGNPDANVMWIGGDTGDSGAAMAHGMFSVNTGQHFQFNVDGSSHIGSMNNSASILLGPPSSPNMTLSTLNGNGIVNVEGNMSVSGVIETRAIEVGKYGTWPFIDFHSSAELVDYNVRMVAFNAPDAATTGRGQLFIEAGSGLVTSHDVEARGAVYSGGLSGGKLTSTGNIEGSEWGSRTLKGYVDDSRKASLHASPLRMLWRRDIGTFNTSFDSNGYPLPADASRPLTVRTWSNGQSYTFSEPLWGKQLFSIHSDGFREMNSGKNQFNFCRAWGAIPRMVGVTATADNGNVITFTSFELMVGSGWWHFALSQDGLTLALMSTGDNGRPIYALYIADIP
Physico‐chemical
properties
protein length:688 AA
molecular weight: 74110,42550 Da
isoelectric point:5,35374
aromaticity:0,08866
hydropathy:-0,22791

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604
DC_0264
STR
1–677
DC_0264
QPI17221.1
1 688
Architecture
ATT
STR
ATT 1-131 | STR 132-677 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI17221.1
1 688
Domain Start End Length (AA) Confidence
N-terminal 1 484 484 0,5661
Central domain 485 677 194 0,2921
C-terminal 678 688 10 0,9950
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-484
Central
485-677
C-terminal
678-688

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage phiPccP-1
[NCBI] 		2768689 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium odoriferum
[NCBI] 		78398 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI17221.1 [NCBI]
Genbank nucleotide accession
MW001769.1 [NCBI]
CDS location
range 34622 -> 36688
strand +
CDS
ATGGCTACAAACATCAGGACAGTCATAACTTATGCTCTGGATGGCTCAAAGACAGACTTCACGATACCCTTTGAGTATCTAGCCCGTAAGTTCGTAGTGGTCACACTTATTGGTGTAGACCGCCGTGAGCTGGTCTTAACGACCGACTACAGGTTCGCAACCAAGACGGTTATCTCAACGACTATCGCTTGGGGTGCGGCACAAGGTTATACCTCAATTGAGATTCGTCGATTCACATCAGCCACTGAGAGATTAGTGGACTTTACTGATGGTTCTATCTTAAGGGCTTATGACCTTAATGTATCTCAGTTACAGACCATTCATGTTGCTGAGGAAGCGCGTGATATGACAGCAGAGACTATTGGTGTTAACAATGATGGTAACCTTGACGCTCGTGGTCGTCGTATTGTTAATGTTGCAGATGCAGTTGATTCAGGGGACGCCATTAACTTAGGTCAGGTCTTACAGCAGAACCAGAACGCATGGCAGGCTCGTGATGAGGCTTTAGGCTTCCGTAATGAAGCTGAAGGTTTCCGTAATGTTGCCACTGACCGTGCGAACGTAGCGACTCAACAGGCAGCAGTGGCAACCGACCGTGCGAACGTAGCGACTCAACAGGCAGCAGACGCAGAGTTCCAAGCTAATCGCGCCACTCAGATGAACTCTGAGGCGTCTTTCTGGAACTCACTGGCTCGTCGCTGGGCGTCAGAGGATACCAATATAGTCGTAGAGAAAGGTCTGTATTCAGCACGCCATTATGCCATCCTAGCGGCTAGCTATCAGGACAATGCTGTGGCGTCCGCTATTGCAGCCAGTAATGAGGCATCCCGCTCCAAGACTGAGGCTGATCGGGCTAAGACTGAGGCTGACAAGCTGGGTAACTGGAATGCCCTAGCAGGCACCATTGATTCAGTAAGTGGCCCTAACGTTTCATGGAAAGGAATCATCTCAGCACCGTCTGTACATGCAACCAGTAACGCAGGGTACATCTTAATGGAACCTAACGCCAACAATCCGGCGCTGACACCTATCATCACCTTTAAGGGATTCCGTGGGAACCCTGATGCTAACGTGATGTGGATTGGTGGGGACACTGGAGACTCAGGTGCGGCGATGGCGCATGGGATGTTCTCAGTGAACACTGGACAACACTTCCAGTTCAACGTTGACGGGTCAAGTCATATCGGGTCTATGAACAATAGCGCATCGATTCTACTAGGGCCTCCGAGTTCCCCTAACATGACCTTATCGACCCTTAATGGGAACGGTATAGTGAACGTGGAAGGGAACATGAGCGTGTCCGGTGTGATTGAGACTCGTGCTATCGAGGTGGGTAAGTACGGCACGTGGCCATTCATTGACTTCCATAGTAGCGCTGAACTAGTGGACTATAACGTCCGTATGGTTGCTTTTAATGCGCCAGATGCAGCAACTACTGGTCGTGGTCAATTGTTCATTGAAGCAGGCAGCGGCCTTGTGACCTCGCATGATGTGGAGGCTCGTGGTGCAGTCTACTCAGGTGGGCTTAGTGGTGGTAAGCTGACCAGTACGGGTAACATTGAGGGGTCTGAATGGGGTTCACGAACTCTTAAAGGCTACGTCGATGATTCTCGTAAAGCTTCCCTCCATGCATCCCCTCTGCGTATGTTATGGCGTAGAGACATTGGCACGTTCAACACCAGCTTCGACTCGAATGGTTATCCTCTACCAGCGGACGCCTCAAGACCTCTTACGGTTCGAACATGGAGTAATGGCCAGTCGTACACGTTCAGTGAGCCTCTATGGGGCAAGCAGTTGTTCTCTATCCATAGTGATGGCTTCAGAGAGATGAACTCCGGTAAGAACCAGTTTAACTTCTGCCGCGCATGGGGTGCAATCCCTCGCATGGTCGGAGTGACGGCTACGGCTGATAATGGGAACGTGATTACCTTCACGAGCTTCGAGCTGATGGTAGGCTCTGGATGGTGGCACTTCGCACTGAGTCAGGACGGTCTGACGCTGGCACTTATGAGCACTGGCGATAATGGTCGTCCTATCTATGCGCTATACATTGCGGACATTCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea7c51deb5ae9e00579f5de34434f5851c3a8c9da704ba8a545f7caac148d93c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5670
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50