Protein

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Genbank accession
YP_010749670.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSLKFPASLKPVVSKGYSMTRRNNVWSVDLAGGGVRQGRDTYYDVFPISVTLITSALGRQAFLSFLEKVDGGASSFWMAHDFGMGIEDYQVTITSTIAESTEDGINWTITFTATAEKSPFQDLENQCLINNLPDLYGCYGDCLGSFLKIYANYETTFPRIWSNEGPAGYPPINLLASTLDSRIVYEGPQVYYINRNGNLVQSAANEWPLTFIDGVAAGRVPPEVSVTNRFLYSSNFSSSNWNKGLVSVSVSETGVLTAAGTYDVTATAASGNHLINQTVDVSVGVGDMVTFSFFAKANGYNFIRMYVRELPTVLGSAVVDLRDGSIYSGPGGTDVTDVGGGWFRISETITATEDKTMSIRMDAWIYSDGVTGSFTGDGVSGIKLSAATVEVNQNTTSPIITSASPVTRPAPSAKVVMNGATSIDITYSDGSVINVQAVDDYATIPQADSAWGSKYITRIDFNVDG
Physico‐chemical
properties
protein length:466 AA
molecular weight: 50040,22390 Da
isoelectric point:4,51889
aromaticity:0,10730
hydropathy:-0,03004

Domains

Domains [InterPro]
DC_0353
STR
48–466
DC_0353
NF048003
Unmapped
226–411
NF048003
YP_010749670.1
1 466
Architecture
STR
STR 48-466
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_XY1
[NCBI] 		2681674 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010749670.1 [NCBI]
Genbank nucleotide accession
NC_073325.1 [NCBI]
CDS location
range 3811 -> 5211
strand -
CDS
ATGTCTTCTTTGAAATTTCCAGCAAGTTTAAAGCCGGTGGTGTCGAAAGGCTACTCAATGACCCGACGTAACAACGTCTGGAGCGTTGATTTAGCTGGCGGCGGAGTGCGCCAGGGGCGCGACACGTATTACGACGTGTTCCCAATAAGCGTAACCCTGATTACCTCAGCACTAGGGCGGCAGGCGTTCCTGTCGTTCCTTGAGAAAGTCGATGGCGGTGCGTCAAGTTTCTGGATGGCGCACGACTTCGGCATGGGTATCGAGGATTATCAGGTAACCATTACGTCAACCATCGCGGAATCCACAGAAGACGGGATTAACTGGACGATTACTTTCACGGCAACCGCGGAGAAATCTCCGTTCCAGGACCTTGAGAACCAGTGCCTGATTAACAATCTTCCAGATTTGTACGGTTGTTACGGGGATTGTCTGGGTAGTTTCCTGAAAATATACGCGAACTATGAGACGACGTTCCCTCGCATCTGGAGCAATGAAGGCCCCGCCGGGTATCCGCCGATTAACCTTCTGGCGTCGACTCTTGATAGCCGCATTGTGTATGAGGGGCCGCAGGTTTATTACATCAACCGCAATGGTAATCTTGTACAGTCCGCCGCCAATGAATGGCCTCTTACGTTTATTGACGGGGTTGCCGCCGGGCGCGTGCCACCAGAGGTATCAGTAACTAACAGATTCCTATATTCAAGCAATTTCTCTTCGTCAAACTGGAACAAAGGTTTGGTGAGTGTATCAGTATCTGAAACAGGTGTTTTAACAGCCGCTGGCACGTACGACGTAACTGCTACCGCCGCAAGCGGTAACCACCTAATAAACCAGACTGTAGATGTTAGCGTTGGTGTTGGCGACATGGTTACTTTTAGTTTCTTCGCAAAAGCAAACGGATACAATTTCATACGGATGTACGTGCGAGAACTTCCTACAGTATTAGGCTCGGCAGTTGTTGATTTGCGGGATGGTAGCATTTATTCCGGCCCAGGCGGTACAGATGTAACCGACGTAGGCGGAGGGTGGTTCCGAATATCGGAGACGATCACCGCGACAGAAGATAAAACAATGAGCATACGGATGGACGCATGGATATATTCAGACGGAGTTACCGGATCCTTTACGGGGGATGGCGTTTCAGGGATTAAATTATCCGCGGCTACTGTAGAGGTAAACCAAAATACAACATCACCAATAATTACGTCGGCGTCTCCTGTAACACGCCCAGCGCCATCGGCAAAAGTAGTAATGAACGGCGCGACAAGTATCGACATCACCTATTCCGACGGCTCCGTGATAAACGTTCAGGCTGTAGATGATTACGCGACTATCCCTCAGGCCGATTCTGCGTGGGGTAGTAAATATATCACTCGTATTGATTTTAATGTGGACGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
af8ea196a33f3fbf60bf9ff49c467044af9510cb3a07960ccd198c541de0bbfd
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8813
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of the virulent phage vB_EcoS_XY1 infecting multidrug resistant Escherichia coli Fu,P. and Zhao,Q. 2020-10-25 — GenBank