Protein

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UniProt accession
A0A8D9PDI7 [UniProt]
Protein name
mRNA splicing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,78
Protein sequence
MANIMRLGGGVGGGGELNIAYGLTPPSDTSKLWVRIEDEPNSVTVQAVIPFGNEAVTAYGVSIPNDTGAQGLTYCNGLLYIFSGFDMYVYENGSWSKFLTFSSDPPKLHYTAPSVVIGKKIFRLFGHSNGASRASVTNFGYNISRILVIDTETKTYSDVSVSGITSCCQLGNAVVVGKKIYFTAGQNGSSGTSGYVGSSHIYEIDSDDPSTATDIGYLFTTSADMRGTSVVAAGGKLYARHGGSAAEGSVPYTDWMEIFDLETKVLSRNQITISKGGQSSCFMPGINIGKYIYWFGGMPKGTIPISFIINHQTNYAQRYNIETGEFDFVTVGAHEGVYINSAMLTNVELLFAKYGGNVPLYKFKGAYELENGKLFIQEGFLDNTWNAVKGKDWDLKVGVSGVFLGGTDGYAQTKDAYLYDLTQQKWISLDGTPYTA
Physico‐chemical
properties
protein length:436 AA
molecular weight: 47083,31770 Da
isoelectric point:5,32686
aromaticity:0,12615
hydropathy:-0,09518

Domains

Domains [InterPro]
IPR015915
STR
4–218
IPR015915 IPR015915
IPR015915
STR
7–263
IPR015915
IPR011043
STR
226–430
IPR011043
A0A8D9PDI7
1 436
Architecture
STR
STR 4-435 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8D9PDI7
1 436
Domain Start End Length (AA) Confidence
N-terminal 1 54 54 0,8770
Central domain 55 272 219 0,7060
C-terminal 273 436 163 0,2502
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-54
Central
55-272
C-terminal
273-436

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ct5O42
[NCBI] 		2826084 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD55338.1 [NCBI]
Genbank nucleotide accession
BK014723 [NCBI]
CDS location
range 3661 -> 4971
strand -
CDS
ATGGCTAATATTATGAGACTTGGCGGTGGTGTAGGTGGCGGTGGAGAACTGAATATAGCTTACGGCCTTACTCCGCCCAGCGATACAAGCAAGCTGTGGGTACGGATTGAAGATGAACCCAATTCTGTAACTGTTCAAGCAGTTATACCATTCGGTAATGAGGCGGTCACTGCGTATGGAGTCAGCATTCCGAACGATACTGGTGCACAGGGATTAACGTATTGCAATGGTTTACTTTACATCTTTTCCGGGTTTGATATGTATGTGTATGAAAACGGTTCGTGGTCTAAGTTTTTGACTTTCAGTAGCGATCCACCAAAATTACATTACACAGCACCTTCTGTAGTTATCGGTAAAAAAATCTTCCGATTATTTGGTCACTCAAATGGCGCTTCTAGGGCGAGTGTTACAAATTTTGGGTATAATATATCCAGAATACTTGTAATAGACACAGAAACAAAAACTTATTCGGATGTTAGTGTGTCTGGTATAACTTCTTGTTGTCAACTTGGTAATGCTGTTGTAGTAGGTAAAAAAATCTATTTTACTGCTGGACAAAATGGTTCATCTGGTACTTCTGGGTATGTAGGTTCTTCCCACATATATGAAATAGACTCTGATGACCCATCAACTGCTACGGATATAGGATATTTGTTTACTACTTCTGCTGACATGAGAGGAACTTCTGTAGTAGCTGCTGGCGGTAAATTATACGCAAGACACGGAGGTTCCGCAGCAGAAGGTTCCGTGCCGTATACAGATTGGATGGAGATTTTTGACTTAGAAACAAAGGTCTTGTCAAGAAATCAAATAACCATAAGTAAAGGTGGTCAATCAAGTTGTTTTATGCCTGGAATAAACATAGGAAAGTACATTTATTGGTTCGGTGGAATGCCTAAAGGAACTATACCAATCAGTTTTATAATTAACCACCAGACTAACTATGCACAAAGATATAACATAGAGACTGGGGAATTTGATTTTGTAACCGTTGGAGCCCATGAAGGGGTTTACATTAACTCTGCCATGTTAACAAACGTAGAGCTACTTTTTGCTAAATACGGAGGAAATGTTCCACTTTACAAATTCAAAGGAGCTTATGAGCTGGAAAACGGAAAACTTTTTATTCAAGAAGGGTTCTTAGACAACACGTGGAACGCAGTTAAAGGTAAAGATTGGGATTTGAAGGTAGGGGTTAGCGGGGTATTCCTCGGTGGGACTGATGGCTATGCACAAACCAAGGATGCATACCTATATGACCTCACTCAGCAAAAATGGATATCTCTGGATGGCACACCATATACAGCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
54f5ff46376818000bfe09be9a887c905ac3f81fb7564459015c1199e0b37982
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5735
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50