Protein

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Genbank accession
UGL60233.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGYFQMTRNVEELFGGVVTAPHQIPFTYKSNVGGETFLSLPFYPVTGVVTINGGMQVPLDNFEIEGNTLNLGRALSKGDVVYCLFDKILSPEDTAKGIRIYKFQAVGGETEFTPDFTSYGVQSLYIGGEYKTPEIEYSYDSTTGKVSLQTALTAGVWVVAEMSVKQPNISPAFDRSIQEIARSANVKDSEVIVSTDTISLLDGKKVVYDIAAQTSYGLPTLPSNVYISSVGNGQLTYNPGSITVSLVEVPNSAAKLKSELNTNIGSSMVRTSSGGTVEESLVKLKDSSQLVTPEQFYEQFPGETDWAVIINAAYTYARANNKSVLLANDYPIKSTIVHMDGLNVICTGRIIASPTGTYSYTTALNNEEGAAYVITTEDGVFNNAKSASIRGLLLTYTSNREPSGYTDTHISSKGVVVTDISNVYMDNIQTFGFLEGGIDIGGISGNGYEIVINKCLSWIYSWTDSEKSGFRCNVTDSTFYDVVTVAYGVGINNVKGGGNVYINPHPWGYPLTTGNTYPNRQCKILFNLIGGGSTFIRPYADTITKLDSSQPASRTNGGIGFYINNWRNKIIAAEAAIHTDDINTNMSLVYLVGDSARNEIEFTNVSNTSKLGNERVSYDSGYPNALFTNIVRVPEYNAGGLSNLTGSVTLTGSGITSTGTYSLRRDGEYIDILITINVSGVSSPTGPISVTLPRGLICRYGPCVEPNQSSCFGSINSSNIGTVAVLNGSTVNFYYKLANGTRTEINAPGVTAGALEFFIRGKISN
Physico‐chemical
properties
protein length:765 AA
molecular weight: 82312,18330 Da
isoelectric point:4,99157
aromaticity:0,09804
hydropathy:-0,09529

Domains

Domains [InterPro]
DC_0116
ATT
1–98
DC_0116 G3DSA:3.30.2020.50 DC_1603
G3DSA:3.30.2020.50
ATT
165–252
G3DSA:3.30.2020.50
UGL60233.1
1 765
Architecture
ATT
ATT
STR
ATT 1-98 | ATT 161-252 | STR 266-763 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL60233.1
1 765
Domain Start End Length (AA) Confidence
N-terminal 1 305 305 0,9935
Central domain 306 633 329 0,9897
C-terminal 634 765 131 0,9858
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-305
Central
306-633
C-terminal
634-765

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenAc-pSC20
[NCBI] 		2894724 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL60233.1 [NCBI]
Genbank nucleotide accession
OK539832.1 [NCBI]
CDS location
range 94116 -> 96413
strand +
CDS
ATGGGGTATTTTCAAATGACCAGAAATGTAGAAGAATTATTCGGCGGCGTAGTCACAGCTCCCCACCAGATTCCTTTCACGTATAAATCAAATGTCGGTGGAGAAACTTTCCTTTCCTTGCCGTTCTATCCTGTCACTGGCGTAGTCACAATCAACGGTGGTATGCAAGTTCCCTTAGACAACTTTGAAATCGAAGGAAATACGTTGAATCTCGGGCGCGCATTGTCCAAAGGCGATGTTGTGTATTGCTTATTCGATAAAATTCTTTCGCCAGAAGATACAGCCAAAGGTATCCGCATATACAAATTTCAGGCCGTAGGAGGTGAAACCGAGTTCACTCCTGATTTCACATCTTATGGAGTCCAATCTCTTTATATCGGTGGCGAGTACAAAACCCCCGAAATTGAATATTCCTATGACAGCACGACAGGAAAAGTATCTTTGCAAACTGCACTGACTGCAGGCGTTTGGGTAGTCGCTGAAATGTCTGTTAAACAACCGAATATCAGTCCGGCGTTTGATCGAAGTATTCAAGAAATCGCCCGTTCTGCTAATGTTAAAGACTCTGAAGTCATCGTTAGTACGGACACCATATCTTTGTTGGATGGGAAGAAAGTTGTTTATGACATAGCGGCGCAAACCAGTTATGGTTTACCTACATTACCCTCTAACGTATATATTTCATCTGTTGGTAATGGACAGTTAACCTATAATCCAGGTTCTATTACAGTTTCTTTAGTTGAAGTGCCTAATTCGGCTGCCAAGTTAAAAAGTGAACTCAATACCAATATTGGTTCTAGCATGGTTCGTACTAGTTCTGGTGGCACTGTTGAAGAATCTCTTGTTAAGTTAAAAGATTCTTCTCAGTTAGTAACCCCAGAACAGTTTTATGAACAATTCCCTGGTGAAACTGATTGGGCAGTAATAATTAATGCTGCATATACTTATGCACGGGCCAATAACAAAAGTGTTCTTCTGGCTAATGATTATCCTATTAAAAGCACCATCGTACATATGGATGGTCTTAATGTTATTTGTACTGGACGCATTATTGCATCCCCAACAGGAACATATTCTTACACCACCGCACTAAATAATGAAGAGGGGGCTGCCTATGTAATTACTACTGAGGATGGTGTATTTAATAATGCCAAGTCTGCTTCTATCCGAGGTCTACTGTTAACCTATACATCAAACCGAGAACCATCTGGTTATACGGATACACACATTTCTTCTAAGGGTGTGGTTGTTACAGATATTTCCAACGTTTACATGGATAATATCCAAACGTTTGGTTTTTTAGAGGGTGGTATTGATATTGGTGGTATTTCTGGTAATGGATATGAAATCGTAATCAACAAGTGTTTATCCTGGATTTACTCATGGACTGATTCTGAGAAGTCTGGTTTTCGATGCAACGTAACTGATTCTACCTTCTATGATGTTGTAACTGTTGCATATGGTGTTGGTATTAATAACGTTAAGGGTGGTGGTAACGTTTATATTAATCCACATCCTTGGGGTTACCCTCTGACAACAGGTAATACTTACCCTAATCGTCAGTGTAAGATTCTATTTAATTTGATTGGCGGGGGTTCAACATTCATTAGACCATACGCGGATACTATTACTAAACTTGACAGTTCTCAGCCAGCAAGCAGAACCAATGGTGGTATCGGGTTTTATATTAATAACTGGCGTAACAAGATTATTGCAGCAGAGGCAGCCATTCATACTGATGATATCAATACTAATATGTCTTTAGTATATCTGGTTGGAGATTCTGCAAGAAATGAAATTGAATTTACTAATGTTAGTAATACTTCAAAGCTTGGTAATGAAAGAGTGTCTTATGACTCTGGTTACCCAAATGCTTTATTTACTAACATTGTACGTGTTCCTGAGTACAATGCTGGTGGGTTAAGTAACCTAACGGGAAGTGTTACCTTAACTGGTTCAGGCATTACCTCCACAGGAACTTATAGTTTACGCCGTGATGGTGAGTATATTGATATACTGATTACCATAAACGTATCCGGAGTATCTTCTCCCACTGGGCCAATTAGCGTCACCCTACCTCGTGGTTTGATTTGCCGTTACGGCCCATGCGTTGAGCCTAACCAAAGTAGTTGTTTCGGTAGCATCAATAGTAGCAATATTGGTACTGTTGCTGTCCTAAATGGAAGTACTGTTAACTTCTACTACAAGTTAGCTAATGGTACGCGTACAGAAATTAATGCCCCAGGCGTTACTGCTGGTGCACTTGAATTCTTTATACGTGGAAAGATTAGTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9272cf98b2a6245d20258e1025551b2efa4a011134e3b29c2a967b069eeaedf6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7343
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella virus vB_SenAc-pSC20 Park,S.Y., Kwon,H.M. and Kim,J.H. 2012-09-15 — GenBank