Protein

View in Explore
Genbank accession
UKM53944.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPLPKPDDLSVIWASIGQATKPAPNKIMTGWTNEIPPYQWHNWYFQRVDKALAHINQQGIAMWDAATTYEGGTSLAKGSDGVVYKAKRSSRGVDPVSPASNLDWEPAFERYGEAAKVNSQLQSLKKDYETLANISNIAMARQNLSVYSKAETDVRYAFKAGAAGQVFAVAPATAGSHAVPRDQLPSLYPRAGAAPGIIALASQAEGYAGTVENKAIAPSVLKALTLYKSQNLADLPDKQLARANLGLASSAVLPENTWLKTASNLADVPNKAAARANLGITSSALLPESTWLKTASNLADVPNKPAARANLEITDTATLPVGDVMRKSQNLAGLTNVPQARANLGLGTMATANSGDFLTSANNLGDVRDAQAARNNLGLKGCATLDALGLPNGATGLDFQSEQSSSASGWAALPNGLILQWGQGPALYDDRSTIVRLPRQARILNVSVTVMGTFNASIGPGAYMTDQWSNTQFRVSCNWGNWAYPFCWFAITTIYGM
Physico‐chemical
properties
protein length:497 AA
molecular weight: 52842,99790 Da
isoelectric point:8,89337
aromaticity:0,07847
hydropathy:-0,19316

Domains

Domains [InterPro]
DC_2128
STR
2–284
DC_2128 DC_1977 G3DSA:2.60.40.3940
Coil
Unmapped
114–134
Coil DC_0362
UKM53944.1
1 497
Architecture
STR
RBD
STR 2-324 | RBD 325-497
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_VL12
[NCBI] 		2914860 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UKM53944.1 [NCBI]
Genbank nucleotide accession
OM421595.1 [NCBI]
CDS location
range 64627 -> 66120
strand -
CDS
ATGCCGCTTCCAAAACCTGACGACCTGTCCGTAATCTGGGCATCTATTGGGCAGGCGACCAAGCCTGCTCCAAACAAGATCATGACAGGCTGGACCAACGAAATCCCTCCCTACCAGTGGCACAACTGGTATTTCCAGAGGGTAGATAAGGCCCTGGCCCACATTAACCAACAAGGCATCGCCATGTGGGATGCCGCCACCACTTACGAAGGGGGTACCAGCCTGGCCAAAGGGTCAGACGGGGTGGTGTACAAGGCCAAACGGTCCAGCCGAGGTGTTGACCCCGTATCTCCGGCAAGCAATTTGGACTGGGAACCCGCATTCGAGAGATATGGTGAGGCTGCGAAAGTAAATTCCCAGCTTCAATCCTTGAAAAAGGATTATGAAACACTGGCCAATATCAGCAACATTGCCATGGCCAGGCAAAACCTCTCGGTATATTCCAAAGCCGAGACGGATGTCCGATATGCCTTCAAGGCTGGGGCAGCCGGGCAGGTGTTTGCTGTAGCCCCTGCCACCGCAGGGAGCCATGCAGTACCAAGGGATCAGTTGCCATCCTTGTACCCCCGAGCAGGAGCGGCGCCGGGTATTATCGCACTGGCAAGCCAAGCGGAAGGATACGCAGGCACCGTTGAGAACAAGGCGATTGCACCGAGTGTCCTGAAAGCACTCACCCTGTATAAGAGCCAGAATCTGGCGGACCTCCCGGATAAGCAGCTTGCCCGGGCGAACCTGGGCCTGGCCAGCTCTGCTGTGTTGCCGGAAAACACCTGGTTGAAAACTGCTAGCAACCTGGCTGATGTTCCTAACAAAGCCGCAGCCCGTGCCAACTTGGGGATCACGTCTTCAGCGCTCCTCCCCGAGAGCACCTGGTTGAAAACTGCTAGCAACCTGGCTGATGTTCCTAACAAGCCCGCAGCACGGGCTAACCTGGAGATCACAGACACTGCTACGCTGCCGGTTGGCGACGTGATGCGTAAGAGTCAGAACCTGGCAGGGTTGACCAACGTTCCTCAAGCCCGTGCCAACTTGGGTTTGGGGACTATGGCAACTGCCAACTCGGGAGACTTCCTAACCTCGGCGAACAACCTTGGAGATGTCAGGGATGCACAAGCAGCCCGGAACAACCTGGGCTTGAAAGGATGTGCTACTCTGGACGCTCTGGGTCTACCGAACGGAGCAACTGGCCTAGACTTCCAATCGGAACAATCCTCCAGCGCATCCGGCTGGGCAGCTCTTCCGAACGGGTTGATCCTTCAGTGGGGTCAAGGCCCTGCACTGTACGATGATCGGTCTACGATTGTCCGGCTGCCACGCCAGGCTCGAATCCTGAACGTGAGCGTAACTGTGATGGGCACTTTCAACGCCTCTATCGGGCCTGGCGCCTACATGACGGACCAGTGGAGTAATACTCAGTTCCGTGTATCGTGCAACTGGGGCAACTGGGCGTATCCGTTCTGCTGGTTCGCTATCACCACCATCTACGGGATGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
07875880dbb0262dafc24da9de0dd7b440c1a1a46e957bcdf2695d536446cd91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7269
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50