Protein

View in Explore

Genbank accession

WWQ70384.1 [GenBank]

Protein name

central tail fiber J

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,96

Protein sequence

MSSGGKAKTPVLLNDNLYHKQFYRVLDILSEGPIYGPVNQNAPLNNVMLNDTPITDANGNTSIPGISIAWRNGTADQSPINGFNAIESTVIVNAKVTHDTPIIRTVSDPNVTRVRLNLGVDALVQSDNKGNQYNTSVMLMVDVKPSSSSTWSLVKDIHIGPGKQSGEYLEAHIIKAPDEKPFDIRVRRVTPDSNSDLLQNDTRWSSYSEIIDDNLSYPHTAVAGAVIDHDQYTDTPTRTYHLRGLIVDVPDNYNTETRTYSGLWLGGFKKAYTNNPAWIFRYLVKNERFGLARHAGYIDVDDGALYVLSQYCDQLVDDGYGGLEPRMTLNAYITEQMSARDLLDNIAGMFRGIALWDGQRLTVMIDAPQDPIATITNANVVDGAFTRSSLPLAECYNAVIVSWTDPENGWEQSKEYVADDGLIARDGYNETTLEAFGCTSRGQAHRAGKWLIETAKREPSKFTFKMARDAIHFTPGDIIEILDNNRAGARLGGRIVANNGRVITVDKVDSEHIAAGDTISLLDSDGKFKKHQITGVNGNNITLASAPAWIRNGTVFAVSTNAAKPVLCRITSVAETENNSVYTIEAAQHDPHKQAVVDNGAIFEINNDTLNHFRVPNIENLKVLNVGSETVQCRATWETQTTTRRLTFEIRVYNADGAVVKSYETTNYSYDFYGIDAGRYSLGIRGRNDTGMKGAESIVDLVIGAPAAPVGVNWVPGVFQATVYPISRTTLTTDTSYEFYYSGETQITDPASVTTKAQYTGRGHQWTFGGMNTGHTYYVYVRTRNAFGVSDFVEASGKPTENFDEITDYVTKDVMNSEQFKGMVSDIKDLGDRTDLIESATNDLKTATDNLITETGSIKADTDTLKKETEDLYKKVKENSDDIGQHESRIDSLEVSSEKVDSELAQAKASLQNASIALINNSLAQTNTRVTLTAQYKKGRTETKAEIDRIDNVIAEEKKAIAESLETITAEMNTMDSSIKGEIARVDKAITTETQARTEAINNVNASISSLENKTDASVSRLDKAISDETQARSDAITDVKADLTTLENSTNASVKRLDQAIADESSARAQAISGISAELGTIENNVDKNSDEIDQAKASLQNASLALINNSIAQSKMSTVIEAKYRKGQIKTKAEIARIDTAIADETQARAEAIASLEANINENISAKITDISTALATHEASSAEKFVQISASFDDVNSSITEWSQAMATADEALSSKIDQLTVTVNGNTTAIQTTSKALTDFKGNIDATYSIKLATDNNGMKYATGMSLGLTGSGTNVQSQCIFLVDRFVLMTAANGTYTTPFYVSNGAMYVKEAFIKNASIGTAKIADAAITMAKIVNEIKSSNYVAGSNGWRITKDGSSEFNNVVVRGEVHANSGKFAGTLEAKTFIGDVANMYTGSDVSRTRDGELVKTITYTDTSDAAYSRHVCVMANVKGYGGCTISIGGSRKASMVDGTERLVMHSAAVTSKSVTVTIKVSAQNSKGAYIQSPTVIVSHGSGSFSG

Physico‐chemical properties

protein length:	1504 AA
molecular weight:	163122,58370 Da
isoelectric point:	5,13219
aromaticity:	0,06782
hydropathy:	-0,34501

Domains

Domains [InterPro]

IPR053171
Unmapped
3–1401

IPR053171

DC_0129
STR
14–946

DC_0129 DC_2322 DC_0738 IPR015406

IPR055385
ATT
87–213

IPR055385 IPR032876 IPR055383 IPR057587 DC_1604 DC_1604

WWQ70384.1

1 1504

Architecture

STR

ATT

STR

ATT

STR

ATT

STR

RBD

STR

RBD

STR 14-86 | ATT 87-213 | STR 214-333 | ATT 334-495 | STR 496-707 | ATT 708-810 | STR 811-946 | STR 972-1012 | RBD 1013-1081 | STR 1082-1193 | RBD 1194-1482 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	3	1401	InterPro	Viral Tip Attachment Protein	-	-	-	-
DC_0129	STR	DC_0129	14	946	Novel HMM	DC_0129	Central	Low	Positional only	234 proteins / 234 hits
IPR055385	ATT	DC_0360	87	213	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	334	495	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR055383	STR	DC_0003	608	706	InterPro cluster	Tip attachment protein J, Fn3-1 domain	Central	High	Text match	998 proteins / 1603 hits
IPR057587	ATT	DC_0130	708	810	InterPro cluster	Tip attachment protein J, second Ig-like domain	Central	Medium	Text match	309 proteins / 309 hits
DC_2322	STR	DC_2322	972	1012	Novel HMM	DC_2322	Central	Low	Positional only	13 proteins / 13 hits
DC_1604	RBD	DC_1604	1009	1103	Novel HMM	DC_1604	C-terminal	Low	Positional only	61 proteins / 61 hits
DC_0738	STR	DC_0738	1082	1193	Novel HMM	DC_0738	Central	Low	Positional only	12 proteins / 12 hits
DC_1604	RBD	DC_1604	1163	1482	Novel HMM	DC_1604	C-terminal	Low	Positional only	61 proteins / 61 hits
IPR015406	RBD	DC_0135	1233	1380	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage mEp013 [NCBI]	3121468	No lineage information
Host	Escherichia coli K-12 [NCBI]	83333	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Genbank protein accession

WWQ70384.1 [NCBI]

Genbank nucleotide accession

PP180002.1 [NCBI]

CDS location

range 45313 -> 49827
strand +

CDS

ATGAGTAGCGGCGGCAAAGCCAAAACACCAGTATTATTAAACGATAACCTGTATCACAAACAGTTTTATCGTGTTTTAGATATTCTCAGCGAGGGGCCGATATACGGTCCGGTAAACCAGAATGCGCCATTAAACAACGTAATGCTTAATGACACGCCCATCACTGACGCAAACGGAAACACATCAATTCCTGGGATTAGTATAGCCTGGCGCAACGGCACGGCTGATCAATCGCCGATTAATGGTTTTAATGCCATCGAGTCAACCGTTATTGTCAACGCAAAGGTAACTCACGACACGCCAATAATCAGGACTGTTTCAGATCCAAACGTTACCCGCGTCAGGTTAAATCTTGGTGTTGATGCTCTCGTTCAATCAGATAATAAGGGCAACCAATATAATACATCTGTCATGTTGATGGTTGATGTTAAACCGTCATCATCTTCTACGTGGTCGCTGGTTAAAGATATACACATTGGTCCCGGTAAACAAAGTGGTGAATATCTGGAAGCTCACATCATCAAAGCTCCGGATGAAAAACCGTTTGATATTCGCGTTCGTCGCGTAACACCAGACAGCAACAGTGATCTATTGCAGAATGATACGCGGTGGAGTAGCTACAGCGAAATCATAGACGATAATCTGTCTTATCCTCATACCGCTGTAGCTGGCGCGGTAATTGACCATGACCAGTATACTGATACACCTACCCGCACATATCACCTTCGCGGCTTGATTGTTGACGTGCCTGATAACTACAACACAGAAACGCGCACGTACTCGGGGTTATGGCTTGGTGGATTCAAAAAAGCGTACACCAACAACCCTGCGTGGATTTTCCGGTATCTTGTTAAAAACGAGCGCTTCGGACTTGCTCGACATGCTGGTTACATTGATGTTGATGATGGTGCTTTGTATGTGCTTTCTCAATACTGCGATCAGTTGGTTGATGATGGCTATGGTGGCCTTGAACCTCGCATGACGCTTAACGCTTACATTACGGAGCAAATGAGCGCCCGCGACCTACTGGATAACATCGCAGGTATGTTTCGTGGTATCGCGTTATGGGACGGTCAACGCCTCACCGTGATGATTGATGCGCCACAGGATCCAATTGCCACCATCACAAACGCAAACGTCGTAGATGGCGCGTTTACTCGCTCAAGCCTTCCACTTGCAGAATGCTACAACGCTGTGATCGTATCCTGGACCGACCCAGAAAACGGCTGGGAGCAATCAAAAGAATATGTAGCAGATGATGGTCTAATCGCCCGTGATGGTTACAACGAAACCACGCTTGAGGCGTTCGGGTGCACGTCACGCGGGCAAGCTCACCGCGCTGGGAAGTGGCTGATAGAAACAGCAAAACGCGAGCCGTCTAAATTCACGTTTAAAATGGCCCGCGACGCAATTCACTTCACCCCTGGTGATATTATCGAGATACTCGACAATAACCGCGCAGGCGCTCGTTTAGGCGGTCGCATCGTGGCAAACAACGGCAGGGTTATCACCGTTGATAAGGTTGATTCTGAACATATCGCGGCTGGCGACACCATCAGCTTACTTGATAGTGATGGCAAGTTTAAAAAACACCAGATCACAGGAGTTAACGGAAACAACATCACCCTTGCATCCGCCCCGGCATGGATTCGTAACGGCACTGTATTTGCTGTATCAACCAACGCAGCAAAACCCGTTTTATGTAGAATCACCAGTGTAGCAGAAACAGAAAATAACAGCGTATACACCATCGAGGCCGCGCAGCATGATCCACATAAGCAGGCTGTAGTTGATAATGGTGCAATCTTCGAGATCAATAACGACACGCTTAATCACTTCCGCGTGCCGAACATTGAAAATCTGAAGGTGTTAAACGTTGGATCTGAAACGGTTCAATGTCGCGCAACATGGGAAACACAGACGACAACGCGTCGCCTGACCTTTGAAATTCGCGTGTATAACGCCGACGGAGCAGTGGTTAAAAGCTACGAAACTACGAATTACAGTTATGATTTTTATGGTATTGATGCTGGTAGGTACTCATTAGGCATTCGTGGCAGAAATGACACGGGCATGAAGGGTGCGGAAAGTATTGTGGATCTGGTCATTGGCGCACCTGCGGCCCCTGTCGGCGTTAATTGGGTTCCAGGTGTATTCCAAGCTACAGTTTACCCGATCAGCAGAACAACGCTCACCACTGACACCAGTTATGAATTTTATTACTCAGGTGAAACACAGATCACCGATCCAGCATCAGTAACCACTAAGGCACAATATACAGGGCGTGGTCATCAGTGGACGTTTGGCGGCATGAATACGGGCCACACATATTACGTTTATGTGCGCACACGCAATGCTTTTGGCGTGTCTGACTTTGTTGAGGCATCAGGTAAGCCAACAGAAAACTTTGATGAAATCACCGATTACGTCACCAAAGACGTGATGAATTCAGAACAATTTAAGGGAATGGTAAGTGATATTAAGGATCTTGGCGACCGCACTGATCTTATCGAAAGCGCTACGAATGACCTTAAAACTGCTACTGACAACCTAATCACAGAAACAGGATCAATAAAAGCTGACACGGATACACTTAAAAAAGAAACGGAAGATCTTTATAAAAAGGTTAAGGAAAACTCCGATGATATTGGACAGCATGAGTCTAGAATAGACTCGCTGGAGGTATCTAGCGAAAAAGTTGACAGCGAACTAGCGCAAGCAAAAGCAAGCCTGCAAAACGCTTCTATTGCTCTTATTAATAACTCACTTGCACAGACTAACACCCGTGTAACTCTTACCGCTCAGTACAAAAAAGGTAGAACAGAGACGAAGGCGGAAATTGACCGTATTGACAACGTTATCGCTGAAGAGAAAAAAGCGATTGCGGAATCACTGGAAACCATCACGGCAGAAATGAATACGATGGATTCCAGCATCAAAGGCGAAATCGCCCGCGTGGACAAAGCAATAACAACAGAAACGCAGGCTAGAACGGAGGCTATAAACAACGTTAACGCCAGTATCAGCAGCCTGGAAAACAAAACTGACGCCAGCGTTTCCCGCCTGGATAAAGCAATATCAGATGAAACGCAGGCAAGAAGCGACGCAATAACGGATGTTAAGGCTGATTTAACAACGCTTGAAAATAGCACGAACGCCAGCGTTAAACGCTTGGATCAGGCGATTGCCGATGAATCAAGCGCCCGCGCACAGGCAATATCTGGCATCAGCGCTGAACTTGGCACTATTGAGAATAATGTTGACAAAAACAGCGACGAAATAGATCAGGCGAAAGCAAGTCTACAAAACGCTTCGCTTGCACTTATCAACAACTCAATAGCTCAAAGCAAAATGAGCACCGTTATTGAGGCAAAATACAGGAAAGGCCAGATAAAAACAAAAGCGGAAATAGCAAGGATTGACACAGCAATAGCAGACGAAACACAGGCCCGCGCGGAGGCTATAGCATCACTTGAAGCCAATATTAATGAAAACATTTCAGCAAAAATAACAGATATATCAACGGCGCTCGCAACTCACGAGGCATCAAGTGCTGAAAAATTTGTTCAAATATCGGCATCTTTCGACGATGTAAACTCAAGCATTACAGAATGGTCACAGGCTATGGCAACGGCTGACGAGGCATTATCAAGCAAAATCGATCAGCTAACAGTGACCGTTAACGGGAACACAACAGCGATACAGACAACGTCGAAAGCGTTAACCGACTTCAAAGGTAATATTGATGCGACGTACTCCATCAAGCTGGCAACCGACAACAACGGCATGAAATACGCAACAGGTATGTCTCTTGGTTTAACTGGCAGCGGTACTAACGTTCAATCGCAGTGTATTTTCCTTGTTGACCGCTTCGTATTAATGACCGCAGCAAACGGCACATATACAACGCCTTTCTATGTGTCTAATGGTGCAATGTATGTTAAAGAAGCGTTTATTAAAAACGCATCAATAGGGACAGCTAAAATTGCAGATGCCGCCATTACTATGGCTAAAATTGTCAATGAAATAAAATCATCTAACTATGTCGCTGGATCGAATGGTTGGAGGATAACAAAAGACGGATCTTCTGAATTTAACAACGTTGTTGTAAGGGGTGAGGTACATGCTAATAGCGGTAAATTCGCTGGTACACTTGAGGCAAAAACCTTTATAGGTGACGTTGCGAACATGTATACAGGATCTGACGTTAGTAGAACAAGGGATGGCGAGTTGGTAAAAACAATCACATACACCGACACATCAGACGCTGCATATAGTAGACATGTTTGTGTTATGGCGAACGTCAAAGGCTATGGTGGTTGCACAATAAGTATCGGGGGTTCACGAAAAGCATCTATGGTAGATGGCACGGAGCGCCTTGTTATGCATTCAGCAGCAGTAACTAGTAAGAGCGTTACAGTTACCATTAAGGTATCCGCTCAAAATAGCAAGGGGGCGTATATACAATCGCCGACCGTCATTGTGTCGCACGGTTCTGGTTCATTCTCAGGATAA

Genome Context

Tertiary structure

PDB ID

b5d7868cc1c942bb446f07956ad4966a833afc2bf8c0c0fcbe2c7f64de39557d

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7908

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
A novel group of Nus-dependent non-lambdoid bacteriophages	Negrete-Mendez,H., Valencia-Toxqui,G., Sepulveda-Robles,O., Rios-Castro,E., Hurtado-Cortes,J.C., Flores,V., Cazares,A., Fernandez-Ramirez,F., Martinez-Penafiel,E. and Kameyama,L.	2025-02-24	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature