Protein

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Genbank accession
AZU97631.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MAIKKFNTDLDLSNTSRIINLPDPVSTRDAANKSYVDAQITILKTTNQTISGKWTFNLDLEVGVNTGSTDGLILQLNNLTSGWARGLTVRNGTTRIAGSGFYGSGTTFYGYYLGFGSNWWDWNTDAVFRVDPSGNVYWKGSLLSGTVPWDRLSNYPSITVGAGLTGGGSLSSSITLSVADGGITTSKIADGAVTSAKLAPGAAIANIGYTPVNKAGDTMTGPLTVSSSLNVSAANPSSISRIRFTRYRSDDTTQTLTRDVIVATDADVHGMKIRIGSGGPLIIGSGEASESVDSNVPVSSEDLYLVSDQGIRFITNLQSGYASRVEALHIGPNGKVTFNGKVDVQNLSFSATDGVELSPIVYSIGSLYGNIPGQNRANFLPHWFMHDAAAFKSFIKVEEWDYNSNTWIDVTNSQNWNDLLKRTGATVTPSSATAGSTVRHRFTLSLNDSYLATIFGMDFSYVNYVKKVKIEAANNLDFSDAQVLLDWSGSLLVNRSWFIAIPQYAFKTYYRVELEIQGEPSIAPRYGQFYVWQKGQSPKPNFSIVPLEWDTNLNINLISSGSSSLPSLSFKGDKNTGIFHPAGDVLAFSTGGVERLRIDYSGRVGIGTSSPSYRLDVSGDVRSTGLVYTNNVRSYSGNLTLSGSGWGMIFEIDTDNNSSNSYVWKGNGIEIMRLTDTGNLGIGVSNPSEKLEVAGNIKASNVLIEGGTIYSNKLQTSWGNLTLSGSGWGMIFEIDTDNNSTDNYIWKGNGTEIMRLTDTGNLGIGTSNPSYKLDVSGTARITSDFYVNGTIYETSDIRIKSDIKQISSAVEKINKLNGYIFTKEKEPSAGLIANEVLEVLPEAVKKDKDGYLQLNYNAVVALLVEALKEKKKKIEDLENRLRKIEEILNREN
Physico‐chemical
properties
protein length:892 AA
molecular weight: 96792,96250 Da
isoelectric point:5,51306
aromaticity:0,09417
hydropathy:-0,23621

Domains

Domains [InterPro]
DC_1795
STR
5–96
DC_1795 DC_1616 DC_0680 IPR051577
DC_0613
RBD
652–890
DC_0613
IPR030392
CHP
795–881
IPR030392
IPR030392
CHP
795–845
IPR030392 Coil
AZU97631.1
1 892
Architecture
STR
RBD
STR
RBD
STR 5-96 | RBD 160-345 | STR 395-669 | RBD 670-890 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AZU97631.1
1 892
Domain Start End Length (AA) Confidence
N-terminal 1 357 357 0,3604
Central domain 358 620 264 0,6114
C-terminal 621 892 271 0,5240
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-357
Central
358-620
C-terminal
621-892

Taxonomy

  Name Taxonomy ID Lineage
Phage Thermus phage YS40_Isch
[NCBI] 		2494333 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AZU97631.1 [NCBI]
Genbank nucleotide accession
MK257744.1 [NCBI]
CDS location
range 1 -> 2679
strand -
CDS
ATGGCGATTAAGAAATTTAACACAGATTTAGACCTAAGCAACACTTCTAGAATAATCAATCTACCCGATCCTGTTAGCACAAGAGATGCTGCTAATAAAAGTTATGTAGATGCTCAAATAACAATCTTAAAAACAACCAATCAAACTATTTCAGGAAAGTGGACATTTAATTTAGATTTAGAAGTTGGTGTAAATACTGGTTCTACAGACGGCCTAATATTACAGCTTAATAATTTAACTTCTGGTTGGGCTAGGGGTCTAACTGTAAGAAACGGCACAACAAGAATTGCTGGTAGCGGTTTTTACGGTAGTGGAACAACTTTTTACGGATATTATTTAGGATTTGGTTCAAATTGGTGGGATTGGAATACAGACGCTGTATTTAGAGTTGATCCTAGTGGAAATGTTTATTGGAAAGGCAGTTTATTAAGTGGTACTGTACCTTGGGATAGACTTTCAAACTATCCTTCCATAACTGTTGGTGCAGGTTTAACGGGGGGAGGAAGCCTTTCTTCATCTATTACCCTCTCGGTAGCTGATGGAGGAATAACTACTAGCAAAATTGCTGATGGTGCTGTTACATCTGCAAAACTCGCCCCTGGTGCTGCAATAGCAAACATCGGTTATACACCAGTAAATAAAGCTGGTGATACAATGACTGGTCCACTTACAGTAAGCTCTTCTTTAAATGTTAGTGCAGCAAACCCTTCTTCTATATCTAGAATTAGATTTACAAGATATAGAAGTGATGATACTACACAAACACTTACCAGAGATGTAATTGTAGCTACAGATGCTGATGTGCATGGAATGAAAATTCGCATTGGATCTGGTGGACCACTAATTATAGGTTCTGGCGAAGCTTCAGAATCTGTAGATTCAAATGTACCTGTTTCCTCTGAAGATTTATATCTTGTATCAGATCAAGGTATTAGATTTATAACAAATCTACAAAGTGGTTATGCTTCTAGAGTAGAAGCTCTTCACATTGGCCCAAATGGAAAAGTAACTTTTAATGGAAAAGTTGATGTGCAAAATCTTTCTTTTTCTGCAACTGATGGAGTAGAACTTTCTCCTATTGTATATAGTATTGGTTCTTTATATGGAAATATACCTGGGCAAAATCGTGCTAACTTTTTACCTCATTGGTTCATGCATGATGCTGCTGCATTTAAATCCTTTATTAAGGTAGAAGAATGGGACTACAATAGCAATACTTGGATTGATGTTACAAACAGTCAAAACTGGAATGATTTGCTCAAACGAACAGGGGCAACTGTTACACCTTCCTCTGCAACTGCAGGAAGCACGGTAAGACACAGATTTACATTATCACTTAATGATTCCTATTTAGCAACAATTTTTGGAATGGATTTCAGTTATGTTAACTATGTCAAAAAAGTAAAAATAGAAGCAGCAAATAACCTTGATTTTTCTGATGCTCAGGTTCTTTTAGATTGGAGCGGTTCTCTTCTTGTAAACCGCTCTTGGTTTATTGCAATACCTCAATATGCGTTTAAAACTTACTATAGAGTTGAGTTAGAAATTCAAGGTGAGCCTTCAATAGCTCCTAGGTATGGACAATTTTATGTATGGCAAAAAGGTCAATCACCCAAGCCAAATTTTAGCATTGTTCCCCTAGAGTGGGATACAAATTTAAATATCAACCTTATTTCATCTGGTTCTTCTTCATTACCTTCTCTTTCTTTTAAGGGTGATAAGAATACAGGAATATTTCATCCAGCCGGAGATGTTTTAGCTTTTTCTACAGGTGGAGTAGAAAGACTGAGAATTGATTATTCAGGAAGAGTAGGAATAGGAACCTCCTCACCTTCATATAGGTTAGATGTATCTGGGGATGTTCGTAGTACTGGTCTTGTTTATACAAATAATGTCAGATCTTATTCTGGTAATTTAACTTTATCAGGCAGCGGTTGGGGCATGATTTTTGAGATTGATACAGATAACAATTCGTCCAACTCTTATGTCTGGAAAGGTAATGGTATAGAAATAATGCGCCTAACCGATACTGGAAATCTTGGAATAGGTGTTAGTAACCCCAGCGAAAAACTAGAAGTAGCGGGCAATATTAAGGCTAGTAATGTTTTAATTGAAGGTGGCACAATATACAGTAATAAATTACAAACTTCTTGGGGCAATTTAACCTTATCAGGCAGCGGTTGGGGGATGATATTTGAAATTGATACCGACAATAATTCAACTGATAATTATATCTGGAAAGGAAATGGAACAGAAATAATGAGGTTGACTGATACAGGAAATCTTGGCATTGGAACTAGTAATCCATCTTATAAACTAGATGTTAGTGGAACAGCAAGAATAACGAGCGATTTCTATGTAAATGGAACAATTTACGAAACTTCAGATATAAGGATAAAGAGTGATATTAAACAAATAAGTAGTGCGGTGGAGAAAATAAATAAACTAAACGGCTACATATTTACTAAAGAAAAAGAACCTAGTGCTGGTCTTATAGCTAACGAAGTTTTAGAAGTTCTTCCTGAGGCTGTAAAGAAAGACAAAGATGGCTACTTACAATTAAACTACAATGCCGTTGTAGCGCTTTTAGTTGAAGCCCTAAAGGAAAAGAAAAAGAAGATTGAAGATTTGGAAAATAGATTAAGAAAAATTGAAGAAATTTTAAACAGGGAGAACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b6aee89fa8f91fa5ec9b2a8a0fc092afa3c0f38af435dbcbab8d3e4e51bb0b4e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6310
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Natural Diversity of CRISPR Spacers of Thermus: Evidence of Local Spacer Acquisition and Global Spacer Exchange Medvedeva,S., Lopatina,A., Artamonova,D., Kolesnik,M., Sitnik,V., Ispolatov,Y. and Severinov,K. 2019 30905291 GenBank